Published in Appl Environ Microbiol on December 01, 2003
Biogeography: an emerging cornerstone for understanding prokaryotic diversity, ecology, and evolution. Microb Ecol (2007) 2.78
Use of multiplex terminal restriction fragment length polymorphism for rapid and simultaneous analysis of different components of the soil microbial community. Appl Environ Microbiol (2006) 1.47
Response of Archaeal and Bacterial Soil Communities to Changes Associated with Outdoor Cattle Overwintering. PLoS One (2015) 1.41
Links between plant and rhizoplane bacterial communities in grassland soils, characterized using molecular techniques. Appl Environ Microbiol (2005) 1.29
Effect of different carbon sources on community composition of bacterial enrichments from soil. Appl Environ Microbiol (2005) 0.98
Molecular detection of epiphytic Acaryochloris spp. on marine macroalgae. Appl Environ Microbiol (2006) 0.95
Changes in bacterial diversity associated with epithelial tissue in the beef cow rumen during the transition to a high-grain diet. Appl Environ Microbiol (2011) 0.95
Response of Archaeal communities in beach sediments to spilled oil and bioremediation. Appl Environ Microbiol (2004) 0.85
Distribution of cren- and euryarchaeota in scots pine mycorrhizospheres and boreal forest humus. Microb Ecol (2007) 0.84
Microbial communities in the world's largest acidic volcanic lake, Kawah Ijen in Indonesia, and in the Banyupahit river originating from it. Microb Ecol (2006) 0.80
Effect of tree species and mycorrhizal colonization on the archaeal population of boreal forest rhizospheres. Appl Environ Microbiol (2008) 0.80
Flavobacterial community structure in a hardwater rivulet and adjacent forest soil, Harz Mountain, Germany. Curr Microbiol (2008) 0.79
Scaling down the analysis of environmental processes: monitoring enzyme activity in natural substrates on a millimeter resolution scale. Appl Environ Microbiol (2012) 0.78
Factors driving potential ammonia oxidation in Canadian arctic ecosystems: does spatial scale matter? Appl Environ Microbiol (2011) 0.78
Archaea in Natural and Impacted Brazilian Environments. Archaea (2016) 0.75
Size Matters: Assessing Optimum Soil Sample Size for Fungal and Bacterial Community Structure Analyses Using High Throughput Sequencing of rRNA Gene Amplicons. Front Microbiol (2016) 0.75
Phylogenetic group-specific oligodeoxynucleotide probes for identification of single microbial cells. J Bacteriol (1988) 21.38
Molecular analysis of bacterial community structure and diversity in unimproved and improved upland grass pastures. Appl Environ Microbiol (1999) 13.32
Prokaryotic diversity--magnitude, dynamics, and controlling factors. Science (2002) 6.58
Rapid method for coextraction of DNA and RNA from natural environments for analysis of ribosomal DNA- and rRNA-based microbial community composition. Appl Environ Microbiol (2000) 5.91
Distribution of bacterioplankton in meromictic Lake Saelenvannet, as determined by denaturing gradient gel electrophoresis of PCR-amplified gene fragments coding for 16S rRNA. Appl Environ Microbiol (1997) 5.10
Molecular phylogeny of Archaea from soil. Proc Natl Acad Sci U S A (1997) 4.75
Novel group within the kingdom Crenarchaeota from boreal forest soil. Appl Environ Microbiol (1997) 2.72
Microbial population structures in soil particle size fractions of a long-term fertilizer field experiment. Appl Environ Microbiol (2001) 2.38
Everything in moderation: archaea as 'non-extremophiles'. Curr Opin Genet Dev (1998) 2.32
Phylogenetic analysis of nonthermophilic members of the kingdom crenarchaeota and their diversity and abundance in soils Appl Environ Microbiol (1998) 1.96
Numerical analysis of grassland bacterial community structure under different land management regimens by using 16S ribosomal DNA sequence data and denaturing gradient gel electrophoresis banding patterns. Appl Environ Microbiol (2001) 1.96
Analysis of bacterial communities in the rhizosphere of chrysanthemum via denaturing gradient gel electrophoresis of PCR-amplified 16S rRNA as well as DNA fragments coding for 16S rRNA. Appl Environ Microbiol (2001) 1.95
Assessment of bacterial community structure in soil by polymerase chain reaction and denaturing gradient gel electrophoresis. J Microbiol Methods (1999) 1.90
Moving Waves of Bacterial Populations and Total Organic Carbon along Roots of Wheat. Microb Ecol (1999) 1.73
Spatial Homogeneity of Abundant Bacterial 16S rRNA Molecules in Grassland Soils Microb Ecol (1998) 1.71
Grassland management regimens reduce small-scale heterogeneity and species diversity of beta-proteobacterial ammonia pxidizer populations. Appl Environ Microbiol (2002) 1.54
Effect of soil aggregate size on methanogenesis and archaeal community structure in anoxic rice field soil. FEMS Microbiol Ecol (2000) 1.44
Abundance and diversity of Archaea in heavy-metal-contaminated soils. Appl Environ Microbiol (1999) 1.36
Geostatistical analysis of the distribution of NH(4)(+) and NO(2)(-)-oxidizing bacteria and serotypes at the millimeter scale along a soil transect. FEMS Microbiol Ecol (2000) 1.23
Wavelike Distributions of Microbial Populations along an Artificial Root Moving through Soil. Microb Ecol (2000) 1.12
The impact of grassland management on archaeal community structure in upland pasture rhizosphere soil. Environ Microbiol (2003) 1.02
Microscale diversity of the genus Nitrobacter in soil on the basis of analysis of genes encoding rRNA. Appl Environ Microbiol (2000) 1.01
Identification of novel Crenarchaeota and Euryarchaeota clusters associated with different depth layers of a forest soil. FEMS Microbiol Ecol (2002) 1.00
The influence of soil pH on the diversity, abundance and transcriptional activity of ammonia oxidizing archaea and bacteria. Environ Microbiol (2008) 3.34
The ecological coherence of high bacterial taxonomic ranks. Nat Rev Microbiol (2010) 2.80
Growth, activity and temperature responses of ammonia-oxidizing archaea and bacteria in soil microcosms. Environ Microbiol (2008) 2.68
Plant host habitat and root exudates shape soil bacterial community structure. ISME J (2008) 2.15
Growth of ammonia-oxidizing archaea in soil microcosms is inhibited by acetylene. FEMS Microbiol Ecol (2009) 2.02
Cultivation of an obligate acidophilic ammonia oxidizer from a nitrifying acid soil. Proc Natl Acad Sci U S A (2011) 1.98
Decline of soil microbial diversity does not influence the resistance and resilience of key soil microbial functional groups following a model disturbance. Environ Microbiol (2007) 1.91
Autotrophic ammonia oxidation by soil thaumarchaea. Proc Natl Acad Sci U S A (2010) 1.89
Identification of active methylotroph populations in an acidic forest soil by stable-isotope probing. Microbiology (2002) 1.85
Niche specialization of terrestrial archaeal ammonia oxidizers. Proc Natl Acad Sci U S A (2011) 1.72
Changes in the community structure and activity of betaproteobacterial ammonia-oxidizing sediment bacteria along a freshwater-marine gradient. Environ Microbiol (2006) 1.72
Ammonia concentration determines differential growth of ammonia-oxidising archaea and bacteria in soil microcosms. ISME J (2011) 1.71
Archaea rather than bacteria control nitrification in two agricultural acidic soils. FEMS Microbiol Ecol (2010) 1.61
Bacterial biodiversity-ecosystem functioning relations are modified by environmental complexity. PLoS One (2010) 1.59
Maintenance of soil functioning following erosion of microbial diversity. Environ Microbiol (2006) 1.58
Primary succession of soil Crenarchaeota across a receding glacier foreland. Environ Microbiol (2005) 1.55
Grassland management regimens reduce small-scale heterogeneity and species diversity of beta-proteobacterial ammonia pxidizer populations. Appl Environ Microbiol (2002) 1.54
Impact of protozoan grazing on bacterial community structure in soil microcosms. Appl Environ Microbiol (2002) 1.49
Potential bias of fungal 18S rDNA and internal transcribed spacer polymerase chain reaction primers for estimating fungal biodiversity in soil. Environ Microbiol (2003) 1.46
Environmentally-acquired bacteria influence microbial diversity and natural innate immune responses at gut surfaces. BMC Biol (2009) 1.45
Diversity of fungi in organic soils under a moorland--Scots pine (Pinus sylvestris L.) gradient. Environ Microbiol (2003) 1.42
Links between ammonia oxidizer species composition, functional diversity and nitrification kinetics in grassland soils. Environ Microbiol (2005) 1.32
Thaumarchaeal ammonia oxidation in an acidic forest peat soil is not influenced by ammonium amendment. Appl Environ Microbiol (2010) 1.32
Links between plant and rhizoplane bacterial communities in grassland soils, characterized using molecular techniques. Appl Environ Microbiol (2005) 1.29
Community structure of ammonia-oxidizing bacteria within anoxic marine sediments. Appl Environ Microbiol (2003) 1.27
Links between ammonia oxidizer community structure, abundance, and nitrification potential in acidic soils. Appl Environ Microbiol (2011) 1.26
Correlation of methane production and functional gene transcriptional activity in a peat soil. Appl Environ Microbiol (2009) 1.21
Effects of management regime and plant species on the enzyme activity and genetic structure of N-fixing, denitrifying and nitrifying bacterial communities in grassland soils. Environ Microbiol (2006) 1.20
Differential photoinhibition of bacterial and archaeal ammonia oxidation. FEMS Microbiol Lett (2011) 1.19
Altitude ammonia-oxidizing bacteria and archaea in soils of Mount Everest. FEMS Microbiol Ecol (2009) 1.17
Crenarchaeal community assembly and microdiversity in developing soils at two sites associated with deglaciation. Environ Microbiol (2006) 1.16
Nitrosospira spp. can produce nitrous oxide via a nitrifier denitrification pathway. Environ Microbiol (2006) 1.16
Influence of inorganic nitrogen management regime on the diversity of nitrite-oxidizing bacteria in agricultural grassland soils. Appl Environ Microbiol (2005) 1.10
Soil pH regulates the abundance and diversity of Group 1.1c Crenarchaeota. FEMS Microbiol Ecol (2009) 1.09
Establishment of normal gut microbiota is compromised under excessive hygiene conditions. PLoS One (2011) 1.07
Effects of aboveground grazing on coupling among nitrifier activity, abundance and community structure. ISME J (2007) 1.06
Relationship between assemblages of mycorrhizal fungi and bacteria on grass roots. Environ Microbiol (2007) 1.05
Differential response of archaeal and bacterial communities to nitrogen inputs and pH changes in upland pasture rhizosphere soil. Environ Microbiol (2004) 1.03
The impact of grassland management on archaeal community structure in upland pasture rhizosphere soil. Environ Microbiol (2003) 1.02
The ribulose-1,5-bisphosphate carboxylase/oxygenase gene cluster of Methylococcus capsulatus (Bath). Arch Microbiol (2002) 1.01
Bridging the phenotypic gap: real-time assessment of mitochondrial function and metabolism of the nematode Caenorhabditis elegans. BMC Physiol (2008) 1.01
Differential effects of microorganism-invertebrate interactions on benthic nitrogen cycling. FEMS Microbiol Ecol (2012) 1.01
Identity of active methanotrophs in landfill cover soil as revealed by DNA-stable isotope probing. FEMS Microbiol Ecol (2007) 1.00
Comparison of PCR primer-based strategies for characterization of ammonia oxidizer communities in environmental samples. FEMS Microbiol Ecol (2006) 0.99
Nutrient amendments in soil DNA stable isotope probing experiments reduce the observed methanotroph diversity. Appl Environ Microbiol (2006) 0.98
Stimulation of thaumarchaeal ammonia oxidation by ammonia derived from organic nitrogen but not added inorganic nitrogen. FEMS Microbiol Ecol (2012) 0.97
Cultivation-independent in situ molecular analysis of bacteria involved in degradation of pentachlorophenol in soil. Environ Microbiol (2005) 0.96
Links between methane flux and transcriptional activities of methanogens and methane oxidizers in a blanket peat bog. FEMS Microbiol Ecol (2010) 0.95
Ammonium supply rate influences archaeal and bacterial ammonia oxidizers in a wetland soil vertical profile. FEMS Microbiol Ecol (2010) 0.95
Community profiling and quantification of putative autotrophic thaumarchaeal communities in environmental samples. Environ Microbiol Rep (2010) 0.93
PCR profiling of ammonia-oxidizer communities in acidic soils subjected to nitrogen and sulphur deposition. FEMS Microbiol Ecol (2007) 0.93
Role of functionally dominant species in varying environmental regimes: evidence for the performance-enhancing effect of biodiversity. BMC Ecol (2012) 0.93
The impact of zero-valent iron nanoparticles on a river water bacterial community. J Hazard Mater (2010) 0.92
Afforestation of moorland leads to changes in crenarchaeal community structure. FEMS Microbiol Ecol (2007) 0.90
Rapid sublethal toxicity assessment using bioluminescent Caenorhabditis elegans, a novel whole-animal metabolic biosensor. Toxicol Sci (2009) 0.90
Differences between betaproteobacterial ammonia-oxidizing communities in marine sediments and those in overlying water. Appl Environ Microbiol (2004) 0.89
Resource availability influences the diversity of a functional group of heterotrophic soil bacteria. Environ Microbiol (2008) 0.88
Characterisation of terrestrial acidophilic archaeal ammonia oxidisers and their inhibition and stimulation by organic compounds. FEMS Microbiol Ecol (2014) 0.87
Stable isotope probing analysis of interactions between ammonia oxidizers. Appl Environ Microbiol (2010) 0.86
Microbiology: The life beneath our feet. Nature (2013) 0.86
Differential response of nonadapted ammonia-oxidising archaea and bacteria to drying-rewetting stress. FEMS Microbiol Ecol (2014) 0.86
A model for bacterial conjugal gene transfer on solid surfaces. FEMS Microbiol Ecol (2003) 0.84
Control of gag-pol gene expression in the Candida albicans retrotransposon Tca2. BMC Mol Biol (2007) 0.84
Functional principal component data analysis: a new method for analysing microbial community fingerprints. J Microbiol Methods (2009) 0.83
Multitrophic interactions in the rhizosphere Rhizosphere microbiology: at the interface of many disciplines and expertises. FEMS Microbiol Ecol (2008) 0.82
pH as a Driver for Ammonia-Oxidizing Archaea in Forest Soils. Microb Ecol (2014) 0.82
The influence of synthetic sheep urine on ammonia oxidizing bacterial communities in grassland soil. FEMS Microbiol Ecol (2006) 0.81
Phylogeny of nitrite reductase (nirK) and nitric oxide reductase (norB) genes from Nitrosospira species isolated from soil. FEMS Microbiol Lett (2006) 0.81
Effect of anoxia and high sulphide concentrations on heterotrophic microbial communities in reduced surface sediments (Black Spots) in sandy intertidal flats of the German Wadden Sea. FEMS Microbiol Ecol (2003) 0.80
Impact of sublethal levels of environmental pollutants found in sewage sludge on a novel Caenorhabditis elegans model biosensor. PLoS One (2012) 0.79
Strategies to determine diversity, growth, and activity of ammonia-oxidizing archaea in soil. Methods Enzymol (2011) 0.78
Rhizosphere bacterial community composition responds to arbuscular mycorrhiza, but not to reductions in microbial activity induced by foliar cutting. FEMS Microbiol Ecol (2008) 0.77
Ecology and metagenomics of soil microorganisms. FEMS Microbiol Ecol (2011) 0.77
Abiotic conversion of extracellular NH2OH contributes to N2O emission during ammonia oxidation. Environ Sci Technol (2017) 0.75
Gut microbiology: the black box and beyond. FEMS Microbiol Ecol (2008) 0.75
Showcasing microbial ecology research in China. FEMS Microbiol Ecol (2009) 0.75