Published in FEMS Microbiol Ecol on June 22, 2009
Examining the global distribution of dominant archaeal populations in soil. ISME J (2010) 4.24
Nitrososphaera viennensis, an ammonia oxidizing archaeon from soil. Proc Natl Acad Sci U S A (2011) 3.25
Autotrophic ammonia oxidation by soil thaumarchaea. Proc Natl Acad Sci U S A (2010) 1.89
Diversity, physiology, and niche differentiation of ammonia-oxidizing archaea. Appl Environ Microbiol (2012) 1.77
Niche specialization of terrestrial archaeal ammonia oxidizers. Proc Natl Acad Sci U S A (2011) 1.72
Ammonia concentration determines differential growth of ammonia-oxidising archaea and bacteria in soil microcosms. ISME J (2011) 1.71
Autotrophic growth of nitrifying community in an agricultural soil. ISME J (2011) 1.67
Ammonia-oxidizing archaea have more important role than ammonia-oxidizing bacteria in ammonia oxidation of strongly acidic soils. ISME J (2011) 1.64
Ammonia oxidation coupled to CO2 fixation by archaea and bacteria in an agricultural soil. Proc Natl Acad Sci U S A (2011) 1.58
Enrichment and characterization of an autotrophic ammonia-oxidizing archaeon of mesophilic crenarchaeal group I.1a from an agricultural soil. Appl Environ Microbiol (2011) 1.41
Ammonia oxidizers in a pilot-scale multilayer rapid infiltration system for domestic wastewater treatment. PLoS One (2014) 1.37
Thaumarchaeal ammonia oxidation in an acidic forest peat soil is not influenced by ammonium amendment. Appl Environ Microbiol (2010) 1.32
Links between ammonia oxidizer community structure, abundance, and nitrification potential in acidic soils. Appl Environ Microbiol (2011) 1.26
Spatial distribution of ammonia-oxidizing bacteria and archaea across a 44-hectare farm related to ecosystem functioning. ISME J (2011) 1.19
Nitrososphaera viennensis gen. nov., sp. nov., an aerobic and mesophilic, ammonia-oxidizing archaeon from soil and a member of the archaeal phylum Thaumarchaeota. Int J Syst Evol Microbiol (2014) 1.18
Hydroxylamine as an intermediate in ammonia oxidation by globally abundant marine archaea. Proc Natl Acad Sci U S A (2012) 1.14
Ecophysiological characterization of ammonia-oxidizing archaea and bacteria from freshwater. Appl Environ Microbiol (2012) 1.06
Distinct responses in ammonia-oxidizing archaea and bacteria after addition of biosolids to an agricultural soil. Appl Environ Microbiol (2011) 1.05
Changes in N-transforming archaea and bacteria in soil during the establishment of bioenergy crops. PLoS One (2011) 1.02
Nitrification of archaeal ammonia oxidizers in acid soils is supported by hydrolysis of urea. ISME J (2012) 1.01
Aerobic nitrous oxide production through N-nitrosating hybrid formation in ammonia-oxidizing archaea. ISME J (2014) 1.00
Drivers of archaeal ammonia-oxidizing communities in soil. Front Microbiol (2012) 0.98
Transcriptional response of nitrifying communities to wetting of dry soil. Appl Environ Microbiol (2013) 0.97
Evidence for different contributions of archaea and bacteria to the ammonia-oxidizing potential of diverse Oregon soils. Appl Environ Microbiol (2010) 0.94
Biochar decelerates soil organic nitrogen cycling but stimulates soil nitrification in a temperate arable field trial. PLoS One (2014) 0.93
Ca. Nitrososphaera and Bradyrhizobium are inversely correlated and related to agricultural practices in long-term field experiments. Front Microbiol (2013) 0.90
Autotrophic growth of bacterial and archaeal ammonia oxidizers in freshwater sediment microcosms incubated at different temperatures. Appl Environ Microbiol (2013) 0.89
Effect of different ammonia concentrations on community succession of ammonia-oxidizing microorganisms in a simulated paddy soil column. PLoS One (2012) 0.89
Phylogenetic congruence and ecological coherence in terrestrial Thaumarchaeota. ISME J (2015) 0.88
Dynamics of ammonia-oxidizing archaea and bacteria populations and contributions to soil nitrification potentials. ISME J (2012) 0.87
Fluctuations in Ammonia Oxidizing Communities Across Agricultural Soils are Driven by Soil Structure and pH. Front Microbiol (2012) 0.87
Comparative analysis of 16S rRNA and amoA genes from archaea selected with organic and inorganic amendments in enrichment culture. Appl Environ Microbiol (2012) 0.86
Retracted Archaeal amoA genes outnumber bacterial amoA genes in municipal wastewater treatment plants in Bangkok. Microb Ecol (2011) 0.85
Use of aliphatic n-alkynes to discriminate soil nitrification activities of ammonia-oxidizing thaumarchaea and bacteria. Appl Environ Microbiol (2013) 0.85
Active autotrophic ammonia-oxidizing bacteria in biofilm enrichments from simulated creek ecosystems at two ammonium concentrations respond to temperature manipulation. Appl Environ Microbiol (2011) 0.84
Interactions between Thaumarchaea, Nitrospira and methanotrophs modulate autotrophic nitrification in volcanic grassland soil. ISME J (2014) 0.83
A review of ammonia-oxidizing bacteria and archaea in Chinese soils. Front Microbiol (2012) 0.83
Effects of the Nitrification Inhibitor 3,4-Dimethylpyrazole Phosphate on Nitrification and Nitrifiers in Two Contrasting Agricultural Soils. Appl Environ Microbiol (2016) 0.82
Ammonia oxidation is not required for growth of Group 1.1c soil Thaumarchaeota. FEMS Microbiol Ecol (2015) 0.81
Nitrous Oxide Emissions from Ephemeral Wetland Soils are Correlated with Microbial Community Composition. Front Microbiol (2011) 0.81
Different land use intensities in grassland ecosystems drive ecology of microbial communities involved in nitrogen turnover in soil. PLoS One (2013) 0.81
A consideration of the relative contributions of different microbial subpopulations to the soil N cycle. Front Microbiol (2012) 0.80
A mesophilic, autotrophic, ammonia-oxidizing archaeon of thaumarchaeal group I.1a cultivated from a deep oligotrophic soil horizon. Appl Environ Microbiol (2014) 0.80
Comparison of water availability effect on ammonia-oxidizing bacteria and archaea in microcosms of a Chilean semiarid soil. Front Microbiol (2012) 0.79
Impact of fungicides on the diversity and function of non-target ammonia-oxidizing microorganisms residing in a litter soil cover. Microb Ecol (2012) 0.79
Environmental factors shaping the community structure of ammonia-oxidizing bacteria and archaea in sugarcane field soil. Microbes Environ (2014) 0.79
Response of ammonia oxidizing bacteria and archaea to acute zinc stress and different moisture regimes in soil. Microb Ecol (2012) 0.78
Ammonia-oxidizer communities in an agricultural soil treated with contrasting nitrogen sources. Front Microbiol (2013) 0.77
Archaeal Ammonia Oxidizers Dominate in Numbers, but Bacteria Drive Gross Nitrification in N-amended Grassland Soil. Front Microbiol (2015) 0.77
High Oxygen Concentration Increases the Abundance and Activity of Bacterial Rather than Archaeal Nitrifiers in Rice Field Soil. Microb Ecol (2015) 0.76
Diversity and abundance of ammonia oxidizing archaea in tropical compost systems. Front Microbiol (2012) 0.76
Response of induced perturbation on replicating β-proteobacterial ammonia-oxidizing populations in soil. Microb Ecol (2011) 0.76
Temperature responses of ammonia-oxidizing prokaryotes in freshwater sediment microcosms. PLoS One (2014) 0.76
Effects of the application of digestates from wet and dry anaerobic fermentation to Japanese paddy and upland soils on short-term nitrification. Microbes Environ (2015) 0.75
Modeling of soil nitrification responses to temperature reveals thermodynamic differences between ammonia-oxidizing activity of archaea and bacteria. ISME J (2016) 0.75
Nitrification Is a Primary Driver of Nitrous Oxide Production in Laboratory Microcosms from Different Land-Use Soils. Front Microbiol (2016) 0.75
Spatial Interaction of Archaeal Ammonia-Oxidizers and Nitrite-Oxidizing Bacteria in an Unfertilized Grassland Soil. Front Microbiol (2016) 0.75
The influence of soil pH on the diversity, abundance and transcriptional activity of ammonia oxidizing archaea and bacteria. Environ Microbiol (2008) 3.34
The ecological coherence of high bacterial taxonomic ranks. Nat Rev Microbiol (2010) 2.80
Growth, activity and temperature responses of ammonia-oxidizing archaea and bacteria in soil microcosms. Environ Microbiol (2008) 2.68
Relative contributions of archaea and bacteria to aerobic ammonia oxidation in the environment. Environ Microbiol (2008) 2.56
Plant host habitat and root exudates shape soil bacterial community structure. ISME J (2008) 2.15
Cultivation of an obligate acidophilic ammonia oxidizer from a nitrifying acid soil. Proc Natl Acad Sci U S A (2011) 1.98
Decline of soil microbial diversity does not influence the resistance and resilience of key soil microbial functional groups following a model disturbance. Environ Microbiol (2007) 1.91
Autotrophic ammonia oxidation by soil thaumarchaea. Proc Natl Acad Sci U S A (2010) 1.89
Identification of active methylotroph populations in an acidic forest soil by stable-isotope probing. Microbiology (2002) 1.85
Niche specialization of terrestrial archaeal ammonia oxidizers. Proc Natl Acad Sci U S A (2011) 1.72
Changes in the community structure and activity of betaproteobacterial ammonia-oxidizing sediment bacteria along a freshwater-marine gradient. Environ Microbiol (2006) 1.72
Ammonia concentration determines differential growth of ammonia-oxidising archaea and bacteria in soil microcosms. ISME J (2011) 1.71
Archaea rather than bacteria control nitrification in two agricultural acidic soils. FEMS Microbiol Ecol (2010) 1.61
Bacterial biodiversity-ecosystem functioning relations are modified by environmental complexity. PLoS One (2010) 1.59
Maintenance of soil functioning following erosion of microbial diversity. Environ Microbiol (2006) 1.58
Ammonia-oxidising archaea--physiology, ecology and evolution. Adv Microb Physiol (2010) 1.57
Archaeal and bacterial ammonia-oxidisers in soil: the quest for niche specialisation and differentiation. Trends Microbiol (2012) 1.55
Primary succession of soil Crenarchaeota across a receding glacier foreland. Environ Microbiol (2005) 1.55
Grassland management regimens reduce small-scale heterogeneity and species diversity of beta-proteobacterial ammonia pxidizer populations. Appl Environ Microbiol (2002) 1.54
Impact of protozoan grazing on bacterial community structure in soil microcosms. Appl Environ Microbiol (2002) 1.49
Potential bias of fungal 18S rDNA and internal transcribed spacer polymerase chain reaction primers for estimating fungal biodiversity in soil. Environ Microbiol (2003) 1.46
Environmentally-acquired bacteria influence microbial diversity and natural innate immune responses at gut surfaces. BMC Biol (2009) 1.45
Diversity of fungi in organic soils under a moorland--Scots pine (Pinus sylvestris L.) gradient. Environ Microbiol (2003) 1.42
Links between ammonia oxidizer species composition, functional diversity and nitrification kinetics in grassland soils. Environ Microbiol (2005) 1.32
Thaumarchaeal ammonia oxidation in an acidic forest peat soil is not influenced by ammonium amendment. Appl Environ Microbiol (2010) 1.32
Homologues of nitrite reductases in ammonia-oxidizing archaea: diversity and genomic context. Environ Microbiol (2010) 1.30
Links between plant and rhizoplane bacterial communities in grassland soils, characterized using molecular techniques. Appl Environ Microbiol (2005) 1.29
Community structure of ammonia-oxidizing bacteria within anoxic marine sediments. Appl Environ Microbiol (2003) 1.27
Links between ammonia oxidizer community structure, abundance, and nitrification potential in acidic soils. Appl Environ Microbiol (2011) 1.26
Correlation of methane production and functional gene transcriptional activity in a peat soil. Appl Environ Microbiol (2009) 1.21
Effects of management regime and plant species on the enzyme activity and genetic structure of N-fixing, denitrifying and nitrifying bacterial communities in grassland soils. Environ Microbiol (2006) 1.20
Differential photoinhibition of bacterial and archaeal ammonia oxidation. FEMS Microbiol Lett (2011) 1.19
Spatial analysis of archaeal community structure in grassland soil. Appl Environ Microbiol (2003) 1.17
Altitude ammonia-oxidizing bacteria and archaea in soils of Mount Everest. FEMS Microbiol Ecol (2009) 1.17
Crenarchaeal community assembly and microdiversity in developing soils at two sites associated with deglaciation. Environ Microbiol (2006) 1.16
Nitrosospira spp. can produce nitrous oxide via a nitrifier denitrification pathway. Environ Microbiol (2006) 1.16
Stable isotope probing analysis of the influence of liming on root exudate utilization by soil microorganisms. Environ Microbiol (2005) 1.11
Influence of inorganic nitrogen management regime on the diversity of nitrite-oxidizing bacteria in agricultural grassland soils. Appl Environ Microbiol (2005) 1.10
Soil pH regulates the abundance and diversity of Group 1.1c Crenarchaeota. FEMS Microbiol Ecol (2009) 1.09
Establishment of normal gut microbiota is compromised under excessive hygiene conditions. PLoS One (2011) 1.07
Resource quality affects carbon cycling in deep-sea sediments. ISME J (2012) 1.07
Effects of aboveground grazing on coupling among nitrifier activity, abundance and community structure. ISME J (2007) 1.06
Relationship between assemblages of mycorrhizal fungi and bacteria on grass roots. Environ Microbiol (2007) 1.05
Differential response of archaeal and bacterial communities to nitrogen inputs and pH changes in upland pasture rhizosphere soil. Environ Microbiol (2004) 1.03
Molecular phylogeny of slug-parasitic nematodes inferred from 18S rRNA gene sequences. Mol Phylogenet Evol (2010) 1.02
The impact of grassland management on archaeal community structure in upland pasture rhizosphere soil. Environ Microbiol (2003) 1.02
Differential effects of microorganism-invertebrate interactions on benthic nitrogen cycling. FEMS Microbiol Ecol (2012) 1.01
The ribulose-1,5-bisphosphate carboxylase/oxygenase gene cluster of Methylococcus capsulatus (Bath). Arch Microbiol (2002) 1.01
Identity of active methanotrophs in landfill cover soil as revealed by DNA-stable isotope probing. FEMS Microbiol Ecol (2007) 1.00
Comparison of PCR primer-based strategies for characterization of ammonia oxidizer communities in environmental samples. FEMS Microbiol Ecol (2006) 0.99
Nutrient amendments in soil DNA stable isotope probing experiments reduce the observed methanotroph diversity. Appl Environ Microbiol (2006) 0.98
Stimulation of thaumarchaeal ammonia oxidation by ammonia derived from organic nitrogen but not added inorganic nitrogen. FEMS Microbiol Ecol (2012) 0.97
Cultivation-independent in situ molecular analysis of bacteria involved in degradation of pentachlorophenol in soil. Environ Microbiol (2005) 0.96
Multi-factorial drivers of ammonia oxidizer communities: evidence from a national soil survey. Environ Microbiol (2013) 0.96
Links between methane flux and transcriptional activities of methanogens and methane oxidizers in a blanket peat bog. FEMS Microbiol Ecol (2010) 0.95
Ammonium supply rate influences archaeal and bacterial ammonia oxidizers in a wetland soil vertical profile. FEMS Microbiol Ecol (2010) 0.95
Community profiling and quantification of putative autotrophic thaumarchaeal communities in environmental samples. Environ Microbiol Rep (2010) 0.93
PCR profiling of ammonia-oxidizer communities in acidic soils subjected to nitrogen and sulphur deposition. FEMS Microbiol Ecol (2007) 0.93
Role of functionally dominant species in varying environmental regimes: evidence for the performance-enhancing effect of biodiversity. BMC Ecol (2012) 0.93
Exploring links between pH and bacterial community composition in soils from the Craibstone Experimental Farm. FEMS Microbiol Ecol (2013) 0.92
The impact of zero-valent iron nanoparticles on a river water bacterial community. J Hazard Mater (2010) 0.92
Afforestation of moorland leads to changes in crenarchaeal community structure. FEMS Microbiol Ecol (2007) 0.90
Differences between betaproteobacterial ammonia-oxidizing communities in marine sediments and those in overlying water. Appl Environ Microbiol (2004) 0.89
Resource availability influences the diversity of a functional group of heterotrophic soil bacteria. Environ Microbiol (2008) 0.88
Characterisation of terrestrial acidophilic archaeal ammonia oxidisers and their inhibition and stimulation by organic compounds. FEMS Microbiol Ecol (2014) 0.87
Stable isotope probing analysis of interactions between ammonia oxidizers. Appl Environ Microbiol (2010) 0.86
Microbiology: The life beneath our feet. Nature (2013) 0.86
Differential response of nonadapted ammonia-oxidising archaea and bacteria to drying-rewetting stress. FEMS Microbiol Ecol (2014) 0.86
Functional principal component data analysis: a new method for analysing microbial community fingerprints. J Microbiol Methods (2009) 0.83
Multitrophic interactions in the rhizosphere Rhizosphere microbiology: at the interface of many disciplines and expertises. FEMS Microbiol Ecol (2008) 0.82
pH as a Driver for Ammonia-Oxidizing Archaea in Forest Soils. Microb Ecol (2014) 0.82
Phylogeny of nitrite reductase (nirK) and nitric oxide reductase (norB) genes from Nitrosospira species isolated from soil. FEMS Microbiol Lett (2006) 0.81
The influence of synthetic sheep urine on ammonia oxidizing bacterial communities in grassland soil. FEMS Microbiol Ecol (2006) 0.81
Grand challenges in terrestrial microbiology. Front Microbiol (2011) 0.80
Effect of anoxia and high sulphide concentrations on heterotrophic microbial communities in reduced surface sediments (Black Spots) in sandy intertidal flats of the German Wadden Sea. FEMS Microbiol Ecol (2003) 0.80
Strategies to determine diversity, growth, and activity of ammonia-oxidizing archaea in soil. Methods Enzymol (2011) 0.78
Rhizosphere bacterial community composition responds to arbuscular mycorrhiza, but not to reductions in microbial activity induced by foliar cutting. FEMS Microbiol Ecol (2008) 0.77
Ecology and metagenomics of soil microorganisms. FEMS Microbiol Ecol (2011) 0.77
Showcasing microbial ecology research in China. FEMS Microbiol Ecol (2009) 0.75
Gut microbiology: the black box and beyond. FEMS Microbiol Ecol (2008) 0.75
Abiotic conversion of extracellular NH2OH contributes to N2O emission during ammonia oxidation. Environ Sci Technol (2017) 0.75