Published in Nature on December 21, 2003
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Sublethal antibiotic treatment leads to multidrug resistance via radical-induced mutagenesis. Mol Cell (2010) 5.33
How antibiotics kill bacteria: from targets to networks. Nat Rev Microbiol (2010) 4.65
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Origin of plasmid-mediated quinolone resistance determinant QnrA. Antimicrob Agents Chemother (2005) 3.18
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Role of reactive oxygen species in antibiotic action and resistance. Curr Opin Microbiol (2009) 1.92
A conserved anti-repressor controls horizontal gene transfer by proteolysis. Mol Microbiol (2008) 1.92
Defining the Pseudomonas aeruginosa SOS response and its role in the global response to the antibiotic ciprofloxacin. J Bacteriol (2006) 1.85
Reassessment of the 2010-2011 Haiti cholera outbreak and rainfall-driven multiseason projections. Proc Natl Acad Sci U S A (2012) 1.72
A toxin-antitoxin system promotes the maintenance of an integrative conjugative element. PLoS Genet (2009) 1.68
Is evolution Darwinian or/and Lamarckian? Biol Direct (2009) 1.67
Functional analysis of insertion sequence ISAba1, responsible for genomic plasticity of Acinetobacter baumannii. J Bacteriol (2009) 1.57
A brief history of the antibiotic era: lessons learned and challenges for the future. Front Microbiol (2010) 1.56
Global fluoroquinolone resistance epidemiology and implictions for clinical use. Interdiscip Perspect Infect Dis (2012) 1.55
Crossing the line: selection and evolution of virulence traits. PLoS Pathog (2006) 1.49
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Evolution of transcriptional regulatory circuits in bacteria. Cell (2009) 1.48
Architecture and gene repertoire of the flexible genome of the extreme acidophile Acidithiobacillus caldus. PLoS One (2013) 1.47
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Antibiotics and the gut microbiota. J Clin Invest (2014) 1.39
Horizontal gene exchange in environmental microbiota. Front Microbiol (2011) 1.39
Microbial persistence and the road to drug resistance. Cell Host Microbe (2013) 1.37
Retargeting R-type pyocins to generate novel bactericidal protein complexes. Appl Environ Microbiol (2008) 1.34
Translesion DNA polymerases. Cold Spring Harb Perspect Biol (2013) 1.33
Bacterial genome instability. Microbiol Mol Biol Rev (2014) 1.31
Conjugative DNA transfer induces the bacterial SOS response and promotes antibiotic resistance development through integron activation. PLoS Genet (2010) 1.28
Antibiotic resistance characteristics of environmental bacteria from an oxytetracycline production wastewater treatment plant and the receiving river. Appl Environ Microbiol (2010) 1.26
Antibiotic resistance gene abundances correlate with metal and geochemical conditions in archived Scottish soils. PLoS One (2011) 1.24
Integrons: past, present, and future. Microbiol Mol Biol Rev (2014) 1.23
Extensive and genome-wide changes in the transcription profile of Staphylococcus aureus induced by modulating the transcription of the cell wall synthesis gene murF. J Bacteriol (2006) 1.23
Formation of SXT tandem arrays and SXT-R391 hybrids. J Bacteriol (2004) 1.23
Hin-mediated DNA knotting and recombining promote replicon dysfunction and mutation. BMC Mol Biol (2007) 1.22
Genomic and functional analysis of ICEPdaSpa1, a fish-pathogen-derived SXT-related integrating conjugative element that can mobilize a virulence plasmid. J Bacteriol (2008) 1.22
The multifaceted roles of antibiotics and antibiotic resistance in nature. Front Microbiol (2013) 1.21
Prevalence of SOS-mediated control of integron integrase expression as an adaptive trait of chromosomal and mobile integrons. Mob DNA (2011) 1.20
Key role of Mfd in the development of fluoroquinolone resistance in Campylobacter jejuni. PLoS Pathog (2008) 1.19
Characterization of the global transcriptional responses to different types of DNA damage and disruption of replication in Bacillus subtilis. J Bacteriol (2006) 1.19
The SOS response promotes qnrB quinolone-resistance determinant expression. EMBO Rep (2009) 1.18
Evolutionary consequences of antibiotic use for the resistome, mobilome and microbial pangenome. Front Microbiol (2013) 1.17
SXT-related integrating conjugative element in New World Vibrio cholerae. Appl Environ Microbiol (2006) 1.17
Folded DNA in action: hairpin formation and biological functions in prokaryotes. Microbiol Mol Biol Rev (2010) 1.16
Starvation, together with the SOS response, mediates high biofilm-specific tolerance to the fluoroquinolone ofloxacin. PLoS Genet (2013) 1.16
Biofilm-related infections: bridging the gap between clinical management and fundamental aspects of recalcitrance toward antibiotics. Microbiol Mol Biol Rev (2014) 1.16
Origin and evolution of antibiotic resistance: the common mechanisms of emergence and spread in water bodies. Front Microbiol (2012) 1.15
Functional characterization of bacterial sRNAs using a network biology approach. Proc Natl Acad Sci U S A (2011) 1.14
Identification of operators and promoters that control SXT conjugative transfer. J Bacteriol (2004) 1.10
Bowel colonization with resistant gram-negative bacilli after antimicrobial therapy of intra-abdominal infections: observations from two randomized comparative clinical trials of ertapenem therapy. Eur J Clin Microbiol Infect Dis (2005) 1.09
Characterization of the SOS regulon of Caulobacter crescentus. J Bacteriol (2007) 1.09
Effect of subinhibitory concentrations of four commonly used biocides on the conjugative transfer of Tn916 in Bacillus subtilis. J Antimicrob Chemother (2013) 1.09
Identification of the origin of transfer (oriT) and a new gene required for mobilization of the SXT/R391 family of integrating conjugative elements. J Bacteriol (2008) 1.09
The master activator of IncA/C conjugative plasmids stimulates genomic islands and multidrug resistance dissemination. PLoS Genet (2014) 1.07
Concentration-dependent activity of antibiotics in natural environments. Front Microbiol (2013) 1.06
Spatial structure and nutrients promote invasion of IncP-1 plasmids in bacterial populations. ISME J (2008) 1.05
Replication and Active Partition of Integrative and Conjugative Elements (ICEs) of the SXT/R391 Family: The Line between ICEs and Conjugative Plasmids Is Getting Thinner. PLoS Genet (2015) 1.05
Role of lon, an ATP-dependent protease homolog, in resistance of Pseudomonas aeruginosa to ciprofloxacin. Antimicrob Agents Chemother (2007) 1.04
Antimicrobials & cholera: are we stranded? Indian J Med Res (2011) 1.02
Horizontal transfer of the high-pathogenicity island of Yersinia pseudotuberculosis. J Bacteriol (2005) 1.02
Stochasticity and bistability in horizontal transfer control of a genomic island in Pseudomonas. Proc Natl Acad Sci U S A (2008) 1.01
Induction of Shiga toxin-converting prophage in Escherichia coli by high hydrostatic pressure. Appl Environ Microbiol (2005) 1.01
Conjugative transfer of the integrative conjugative elements ICESt1 and ICESt3 from Streptococcus thermophilus. J Bacteriol (2009) 1.01
Lateral gene transfer of streptococcal ICE element RD2 (region of difference 2) encoding secreted proteins. BMC Microbiol (2011) 1.00
Shotgun metagenomics reveals a wide array of antibiotic resistance genes and mobile elements in a polluted lake in India. Front Microbiol (2014) 0.99
Staphylococcus aureus strains isolated from bloodstream infections changed significantly in 2006. J Clin Microbiol (2007) 0.98
High-throughput screening for RecA inhibitors using a transcreener adenosine 5'-O-diphosphate assay. Assay Drug Dev Technol (2011) 0.95
Collateral effects of antibiotics: carbadox and metronidazole induce VSH-1 and facilitate gene transfer among Brachyspira hyodysenteriae strains. Appl Environ Microbiol (2008) 0.95
Effect of subinhibitory concentrations of antibiotics on intrachromosomal homologous recombination in Escherichia coli. Antimicrob Agents Chemother (2009) 0.95
A globally distributed mobile genetic element inhibits natural transformation of Vibrio cholerae. Proc Natl Acad Sci U S A (2015) 0.95
Connecting environment and genome plasticity in the characterization of transformation-induced SOS regulation and carbon catabolite control of the Vibrio cholerae integron integrase. J Bacteriol (2012) 0.94
Antibiotic-Induced Changes in the Intestinal Microbiota and Disease. Trends Mol Med (2016) 0.94
Integrative and Conjugative Elements (ICEs): What They Do and How They Work. Annu Rev Genet (2015) 0.93
Identification of a novel streptococcal gene cassette mediating SOS mutagenesis in Streptococcus uberis. J Bacteriol (2007) 0.93
The Photobacterium damselae subsp. damselae hemolysins damselysin and HlyA are encoded within a new virulence plasmid. Infect Immun (2011) 0.93
Analysis of the SOS response of Vibrio and other bacteria with multiple chromosomes. BMC Genomics (2012) 0.92
Cellular variability of RpoS expression underlies subpopulation activation of an integrative and conjugative element. PLoS Genet (2012) 0.92
Horizontal DNA Transfer Mechanisms of Bacteria as Weapons of Intragenomic Conflict. PLoS Biol (2016) 0.91
Implications of stress-induced genetic variation for minimizing multidrug resistance in bacteria. BMC Med (2012) 0.91
Novel Inhibitors of E. coli RecA ATPase Activity. Curr Chem Genomics (2010) 0.91
Units of plasticity in bacterial genomes: new insight from the comparative genomics of two bacteria interacting with invertebrates, Photorhabdus and Xenorhabdus. BMC Genomics (2010) 0.91
Directed molecular screening for RecA ATPase inhibitors. Bioorg Med Chem Lett (2007) 0.91
Horizontal gene transfer in the human gastrointestinal tract: potential spread of antibiotic resistance genes. Infect Drug Resist (2014) 0.91
Transfer activation of SXT/R391 integrative and conjugative elements: unraveling the SetCD regulon. Nucleic Acids Res (2015) 0.90
The initial state of the human gut microbiome determines its reshaping by antibiotics. ISME J (2015) 0.90
Nanoalumina promotes the horizontal transfer of multiresistance genes mediated by plasmids across genera. Proc Natl Acad Sci U S A (2012) 0.90
Excision dynamics of Vibrio pathogenicity island-2 from Vibrio cholerae: role of a recombination directionality factor VefA. BMC Microbiol (2010) 0.89
The Leptospira interrogans lexA gene is not autoregulated. J Bacteriol (2005) 0.89
Improving quinolone use in hospitals by using a bundle of interventions in an interrupted time series analysis. Antimicrob Agents Chemother (2010) 0.88
Transcriptome analysis of the mobile genome ICEclc in Pseudomonas knackmussii B13. BMC Microbiol (2010) 0.88
The phn Island: A New Genomic Island Encoding Catabolism of Polynuclear Aromatic Hydrocarbons. Front Microbiol (2012) 0.88
The origin of the Haitian cholera outbreak strain. N Engl J Med (2010) 9.85
Origins of the E. coli strain causing an outbreak of hemolytic-uremic syndrome in Germany. N Engl J Med (2011) 9.37
Genomic islands in pathogenic and environmental microorganisms. Nat Rev Microbiol (2004) 6.94
Integrative and conjugative elements: mosaic mobile genetic elements enabling dynamic lateral gene flow. Nat Rev Microbiol (2010) 3.59
D-amino acids govern stationary phase cell wall remodeling in bacteria. Science (2009) 3.55
Genome-wide mapping of methylated adenine residues in pathogenic Escherichia coli using single-molecule real-time sequencing. Nat Biotechnol (2012) 3.39
Shaping bacterial genomes with integrative and conjugative elements. Res Microbiol (2004) 3.37
Targeting QseC signaling and virulence for antibiotic development. Science (2008) 3.26
Bacteriophage control of bacterial virulence. Infect Immun (2002) 2.97
Comparative ICE genomics: insights into the evolution of the SXT/R391 family of ICEs. PLoS Genet (2009) 2.91
A dynamic, mitotic-like mechanism for bacterial chromosome segregation. Genes Dev (2006) 2.75
Hfq is essential for Vibrio cholerae virulence and downregulates sigma expression. Mol Microbiol (2004) 2.73
Genomic and functional analyses of SXT, an integrating antibiotic resistance gene transfer element derived from Vibrio cholerae. J Bacteriol (2002) 2.71
The current ICE age: biology and evolution of SXT-related integrating conjugative elements. Plasmid (2006) 2.63
Filamentous phages linked to virulence of Vibrio cholerae. Curr Opin Microbiol (2003) 2.57
Experimental discovery of sRNAs in Vibrio cholerae by direct cloning, 5S/tRNA depletion and parallel sequencing. Nucleic Acids Res (2009) 2.25
Bacteriophage control of Shiga toxin 1 production and release by Escherichia coli. Mol Microbiol (2002) 2.13
Identification of 17 Pseudomonas aeruginosa sRNAs and prediction of sRNA-encoding genes in 10 diverse pathogens using the bioinformatic tool sRNAPredict2. Nucleic Acids Res (2006) 2.11
Analysis of the genome of the Escherichia coli O157:H7 2006 spinach-associated outbreak isolate indicates candidate genes that may enhance virulence. Infect Immun (2009) 2.07
RNA-Seq-based monitoring of infection-linked changes in Vibrio cholerae gene expression. Cell Host Microbe (2011) 2.05
Identification of small RNAs in diverse bacterial species. Curr Opin Microbiol (2007) 2.01
Filamentous phage integration requires the host recombinases XerC and XerD. Nature (2002) 2.00
Distinct pathways for modification of the bacterial cell wall by non-canonical D-amino acids. EMBO J (2011) 1.94
Fucose sensing regulates bacterial intestinal colonization. Nature (2012) 1.89
Distinct replication requirements for the two Vibrio cholerae chromosomes. Cell (2003) 1.88
Critical roles for stx2, eae, and tir in enterohemorrhagic Escherichia coli-induced diarrhea and intestinal inflammation in infant rabbits. Infect Immun (2003) 1.81
High-throughput, kingdom-wide prediction and annotation of bacterial non-coding RNAs. PLoS One (2008) 1.80
Distribution of centromere-like parS sites in bacteria: insights from comparative genomics. J Bacteriol (2007) 1.78
Characterization of XerC- and XerD-dependent CTX phage integration in Vibrio cholerae. Mol Microbiol (2004) 1.77
Distinct segregation dynamics of the two Vibrio cholerae chromosomes. Mol Microbiol (2005) 1.72
Divided genomes: negotiating the cell cycle in prokaryotes with multiple chromosomes. Mol Microbiol (2005) 1.69
A toxin-antitoxin system promotes the maintenance of an integrative conjugative element. PLoS Genet (2009) 1.68
Comparison of Shiga toxin production by hemolytic-uremic syndrome-associated and bovine-associated Shiga toxin-producing Escherichia coli isolates. Appl Environ Microbiol (2003) 1.65
Control of SXT integration and excision. J Bacteriol (2003) 1.64
LexA cleavage is required for CTX prophage induction. Mol Cell (2005) 1.64
A satellite phage-encoded antirepressor induces repressor aggregation and cholera toxin gene transfer. EMBO J (2002) 1.61
Characterization of the small untranslated RNA RyhB and its regulon in Vibrio cholerae. J Bacteriol (2005) 1.60
par genes and the pathology of chromosome loss in Vibrio cholerae. Proc Natl Acad Sci U S A (2006) 1.53
sRNAPredict: an integrative computational approach to identify sRNAs in bacterial genomes. Nucleic Acids Res (2005) 1.52
Mobile antibiotic resistance encoding elements promote their own diversity. PLoS Genet (2009) 1.49
Inflammation and disintegration of intestinal villi in an experimental model for Vibrio parahaemolyticus-induced diarrhea. PLoS Pathog (2012) 1.47
The Vibrio cholerae ToxR-regulated porin OmpU confers resistance to antimicrobial peptides. Infect Immun (2004) 1.40
Emerging knowledge of regulatory roles of D-amino acids in bacteria. Cell Mol Life Sci (2010) 1.39
Characterization of a higBA toxin-antitoxin locus in Vibrio cholerae. J Bacteriol (2006) 1.38
Back to the future: studying cholera pathogenesis using infant rabbits. MBio (2010) 1.38
Instability of pathogenicity islands in uropathogenic Escherichia coli 536. J Bacteriol (2004) 1.37
Evolutionary and functional analyses of variants of the toxin-coregulated pilus protein TcpA from toxigenic Vibrio cholerae non-O1/non-O139 serogroup isolates. Microbiology (2002) 1.36
High-resolution definition of the Vibrio cholerae essential gene set with hidden Markov model-based analyses of transposon-insertion sequencing data. Nucleic Acids Res (2013) 1.35
Meeting cholera's challenge to Haiti and the world: a joint statement on cholera prevention and care. PLoS Negl Trop Dis (2011) 1.33
Synchronous replication initiation of the two Vibrio cholerae chromosomes. Curr Biol (2004) 1.31
Transcription of the toxin genes present within the Staphylococcal phage phiSa3ms is intimately linked with the phage's life cycle. J Bacteriol (2003) 1.31
A multidomain hub anchors the chromosome segregation and chemotactic machinery to the bacterial pole. Genes Dev (2012) 1.29
Entering the era of bacterial epigenomics with single molecule real time DNA sequencing. Curr Opin Microbiol (2013) 1.29
Vibrio cholerae interactions with the gastrointestinal tract: lessons from animal studies. Curr Top Microbiol Immunol (2009) 1.27
RNase E-dependent processing stabilizes MicX, a Vibrio cholerae sRNA. Mol Microbiol (2007) 1.26
Independent control of replication initiation of the two Vibrio cholerae chromosomes by DnaA and RctB. J Bacteriol (2006) 1.25
Formation of SXT tandem arrays and SXT-R391 hybrids. J Bacteriol (2004) 1.23
The molecular basis of infectious diseases: pathogenicity islands and other mobile genetic elements. A review. Acta Microbiol Immunol Hung (2003) 1.23
Genomic and functional analysis of ICEPdaSpa1, a fish-pathogen-derived SXT-related integrating conjugative element that can mobilize a virulence plasmid. J Bacteriol (2008) 1.22
Type 2 secretion promotes enterohemorrhagic Escherichia coli adherence and intestinal colonization. Infect Immun (2008) 1.20
The locus of enterocyte effacement-encoded effector proteins all promote enterohemorrhagic Escherichia coli pathogenicity in infant rabbits. Infect Immun (2005) 1.19
ParA2, a Vibrio cholerae chromosome partitioning protein, forms left-handed helical filaments on DNA. Proc Natl Acad Sci U S A (2010) 1.19
Comparative genomics of recent Shiga toxin-producing Escherichia coli O104:H4: short-term evolution of an emerging pathogen. MBio (2013) 1.19
Enterohemorrhagic Escherichia coli O157:H7 gal mutants are sensitive to bacteriophage P1 and defective in intestinal colonization. Infect Immun (2006) 1.18
A family of ParA-like ATPases promotes cell pole maturation by facilitating polar localization of chemotaxis proteins. Genes Dev (2011) 1.18
Type III secretion is essential for the rapidly fatal diarrheal disease caused by non-O1, non-O139 Vibrio cholerae. MBio (2011) 1.17
SXT-related integrating conjugative element in New World Vibrio cholerae. Appl Environ Microbiol (2006) 1.17
Distinct centromere-like parS sites on the two chromosomes of Vibrio spp. J Bacteriol (2007) 1.16
Antimicrobial peptides activate the Vibrio cholerae sigmaE regulon through an OmpU-dependent signalling pathway. Mol Microbiol (2006) 1.14
CTXphi and Vibrio cholerae: exploring a newly recognized type of phage-host cell relationship. Mol Microbiol (2005) 1.14
Reactogenicity of live-attenuated Vibrio cholerae vaccines is dependent on flagellins. Proc Natl Acad Sci U S A (2010) 1.14
Hfq negatively regulates type III secretion in EHEC and several other pathogens. Mol Microbiol (2009) 1.12
Interactions between inner membrane proteins in donor and recipient cells limit conjugal DNA transfer. Dev Cell (2005) 1.10
Identification of operators and promoters that control SXT conjugative transfer. J Bacteriol (2004) 1.10
The CTXphi repressor RstR binds DNA cooperatively to form tetrameric repressor-operator complexes. J Biol Chem (2003) 1.08
Regulatory cross-talk links Vibrio cholerae chromosome II replication and segregation. PLoS Genet (2011) 1.06
EspFU, a type III-translocated effector of actin assembly, fosters epithelial association and late-stage intestinal colonization by E. coli O157:H7. Cell Microbiol (2007) 1.06
A Vibrio parahaemolyticus T3SS effector mediates pathogenesis by independently enabling intestinal colonization and inhibiting TAK1 activation. Cell Rep (2013) 1.04
Autorepression of RctB, an initiator of Vibrio cholerae chromosome II replication. J Bacteriol (2006) 1.00
Transient shielding of intimin and the type III secretion system of enterohemorrhagic and enteropathogenic Escherichia coli by a group 4 capsule. J Bacteriol (2008) 0.99
Mining regulatory 5'UTRs from cDNA deep sequencing datasets. Nucleic Acids Res (2009) 0.99
Dam methyltransferase is required for stable lysogeny of the Shiga toxin (Stx2)-encoding bacteriophage 933W of enterohemorrhagic Escherichia coli O157:H7. J Bacteriol (2007) 0.98
Pathogenomics of mobile genetic elements of toxigenic bacteria. Int J Med Microbiol (2004) 0.97
Genetic analysis of activation of the Vibrio cholerae Cpx pathway. J Bacteriol (2009) 0.97
High-throughput sequencing reveals suppressors of Vibrio cholerae rpoE mutations: one fewer porin is enough. Nucleic Acids Res (2009) 0.96
Non-O1 Vibrio cholerae unlinked to cholera in Haiti. Proc Natl Acad Sci U S A (2012) 0.96
An Escherichia coli O157-specific engineered pyocin prevents and ameliorates infection by E. coli O157:H7 in an animal model of diarrheal disease. Antimicrob Agents Chemother (2011) 0.96
pIIICTX, a predicted CTXphi minor coat protein, can expand the host range of coliphage fd to include Vibrio cholerae. J Bacteriol (2003) 0.94
The SXT/R391 family of integrative conjugative elements is composed of two exclusion groups. J Bacteriol (2007) 0.94
Conserved small RNAs govern replication and incompatibility of a diverse new plasmid family from marine bacteria. Nucleic Acids Res (2010) 0.93
The three vibrio cholerae chromosome II-encoded ParE toxins degrade chromosome I following loss of chromosome II. J Bacteriol (2010) 0.93
Vibrio cholerae LexA coordinates CTX prophage gene expression. J Bacteriol (2009) 0.93
Virulence of an emerging pathogenic lineage of Vibrio nigripulchritudo is dependent on two plasmids. Environ Microbiol (2010) 0.93
Determinants of entry exclusion within Eex and TraG are cytoplasmic. J Bacteriol (2007) 0.92
ATP negatively regulates the initiator protein of Vibrio cholerae chromosome II replication. Proc Natl Acad Sci U S A (2008) 0.92
Vibrio cholerae ParE2 poisons DNA gyrase via a mechanism distinct from other gyrase inhibitors. J Biol Chem (2010) 0.92
Substrate specificity of an elongation-specific peptidoglycan endopeptidase and its implications for cell wall architecture and growth of Vibrio cholerae. Mol Microbiol (2013) 0.91
CadA negatively regulates Escherichia coli O157:H7 adherence and intestinal colonization. Infect Immun (2008) 0.91
Differential requirement for PBP1a and PBP1b in in vivo and in vitro fitness of Vibrio cholerae. Infect Immun (2014) 0.91