Published in Genome Res on April 12, 2004
Genome sequence of the palaeopolyploid soybean. Nature (2010) 17.82
The Genomes of Oryza sativa: a history of duplications. PLoS Biol (2005) 7.67
Rapid recent growth and divergence of rice nuclear genomes. Proc Natl Acad Sci U S A (2004) 5.35
LTR_FINDER: an efficient tool for the prediction of full-length LTR retrotransposons. Nucleic Acids Res (2007) 3.89
Mechanisms of recent genome size variation in flowering plants. Ann Bot (2005) 3.86
The banana (Musa acuminata) genome and the evolution of monocotyledonous plants. Nature (2012) 3.53
Sequence composition and genome organization of maize. Proc Natl Acad Sci U S A (2004) 3.22
Evolution of DNA sequence nonhomologies among maize inbreds. Plant Cell (2005) 3.17
Gene movement by Helitron transposons contributes to the haplotype variability of maize. Proc Natl Acad Sci U S A (2005) 3.13
Doubling genome size without polyploidization: dynamics of retrotransposition-driven genomic expansions in Oryza australiensis, a wild relative of rice. Genome Res (2006) 3.02
Differential lineage-specific amplification of transposable elements is responsible for genome size variation in Gossypium. Genome Res (2006) 2.69
Exceptional diversity, non-random distribution, and rapid evolution of retroelements in the B73 maize genome. PLoS Genet (2009) 2.45
The Brassica oleracea genome reveals the asymmetrical evolution of polyploid genomes. Nat Commun (2014) 2.43
Molecular basis of evolutionary events that shaped the hardness locus in diploid and polyploid wheat species (Triticum and Aegilops). Plant Cell (2005) 2.40
The Oryza bacterial artificial chromosome library resource: construction and analysis of 12 deep-coverage large-insert BAC libraries that represent the 10 genome types of the genus Oryza. Genome Res (2005) 2.23
High rate of chimeric gene origination by retroposition in plant genomes. Plant Cell (2006) 2.08
Analysis of retrotransposon structural diversity uncovers properties and propensities in angiosperm genome evolution. Proc Natl Acad Sci U S A (2006) 2.05
An analysis of synteny of Arachis with Lotus and Medicago sheds new light on the structure, stability and evolution of legume genomes. BMC Genomics (2009) 2.02
The nuclear genome of Brachypodium distachyon: analysis of BAC end sequences. Funct Integr Genomics (2007) 1.97
Genomic paleontology provides evidence for two distinct origins of Asian rice (Oryza sativa L.). Mol Genet Genomics (2004) 1.96
Uneven chromosome contraction and expansion in the maize genome. Genome Res (2006) 1.96
A workshop report on wheat genome sequencing: International Genome Research on Wheat Consortium. Genetics (2004) 1.94
Genome-wide comparative analysis of copia retrotransposons in Triticeae, rice, and Arabidopsis reveals conserved ancient evolutionary lineages and distinct dynamics of individual copia families. Genome Res (2007) 1.78
Maize centromere structure and evolution: sequence analysis of centromeres 2 and 5 reveals dynamic Loci shaped primarily by retrotransposons. PLoS Genet (2009) 1.71
Distribution, diversity, evolution, and survival of Helitrons in the maize genome. Proc Natl Acad Sci U S A (2009) 1.60
Alu recombination-mediated structural deletions in the chimpanzee genome. PLoS Genet (2007) 1.59
Ancestral grass karyotype reconstruction unravels new mechanisms of genome shuffling as a source of plant evolution. Genome Res (2010) 1.55
Dynamic evolution of oryza genomes is revealed by comparative genomic analysis of a genus-wide vertical data set. Plant Cell (2008) 1.55
Sequence, annotation, and analysis of synteny between rice chromosome 3 and diverged grass species. Genome Res (2005) 1.48
Recombination, rearrangement, reshuffling, and divergence in a centromeric region of rice. Proc Natl Acad Sci U S A (2005) 1.48
Cotton genome mapping with new microsatellites from Acala 'Maxxa' BAC-ends. Mol Genet Genomics (2006) 1.46
Nearly identical paralogs: implications for maize (Zea mays L.) genome evolution. Genetics (2006) 1.45
The Pinus taeda genome is characterized by diverse and highly diverged repetitive sequences. BMC Genomics (2010) 1.40
Structure and evolution of the r/b chromosomal regions in rice, maize and sorghum. Genetics (2004) 1.37
Comprehensive molecular cytogenetic analysis of sorghum genome architecture: distribution of euchromatin, heterochromatin, genes and recombination in comparison to rice. Genetics (2005) 1.36
Differential accumulation of retroelements and diversification of NB-LRR disease resistance genes in duplicated regions following polyploidy in the ancestor of soybean. Plant Physiol (2008) 1.34
Do genetic recombination and gene density shape the pattern of DNA elimination in rice long terminal repeat retrotransposons? Genome Res (2009) 1.33
S locus genes and the evolution of self-fertility in Arabidopsis thaliana. Plant Cell (2007) 1.31
Types and rates of sequence evolution at the high-molecular-weight glutenin locus in hexaploid wheat and its ancestral genomes. Genetics (2006) 1.31
Incongruent patterns of local and global genome size evolution in cotton. Genome Res (2004) 1.30
Copy number variation shapes genome diversity in Arabidopsis over immediate family generational scales. Genome Biol Evol (2010) 1.29
Detailed analysis of a contiguous 22-Mb region of the maize genome. PLoS Genet (2009) 1.29
Evolution of rDNA in Nicotiana allopolyploids: a potential link between rDNA homogenization and epigenetics. Ann Bot (2008) 1.28
Genome size and GC content evolution of Festuca: ancestral expansion and subsequent reduction. Ann Bot (2007) 1.28
Mutational decay and age of chloroplast and mitochondrial genomes transferred recently to angiosperm nuclear chromosomes. Plant Physiol (2005) 1.27
Molecular genetics of berry colour variation in table grape. Mol Genet Genomics (2006) 1.26
The genome sequence of the most widely cultivated cacao type and its use to identify candidate genes regulating pod color. Genome Biol (2013) 1.26
Transposable element distribution, abundance and role in genome size variation in the genus Oryza. BMC Evol Biol (2007) 1.25
Dynamics and differential proliferation of transposable elements during the evolution of the B and A genomes of wheat. Genetics (2008) 1.24
Genome structures and halophyte-specific gene expression of the extremophile Thellungiella parvula in comparison with Thellungiella salsuginea (Thellungiella halophila) and Arabidopsis. Plant Physiol (2010) 1.24
A GeneTrek analysis of the maize genome. Proc Natl Acad Sci U S A (2007) 1.23
Whole-genome sequencing of Oryza brachyantha reveals mechanisms underlying Oryza genome evolution. Nat Commun (2013) 1.22
Updating of transposable element annotations from large wheat genomic sequences reveals diverse activities and gene associations. Mol Genet Genomics (2005) 1.21
Variability, recombination, and mosaic evolution of the barley BARE-1 retrotransposon. J Mol Evol (2005) 1.20
Hybridization and genome size evolution: timing and magnitude of nuclear DNA content increases in Helianthus homoploid hybrid species. New Phytol (2005) 1.19
Gene enrichment in maize with hypomethylated partial restriction (HMPR) libraries. Genome Res (2005) 1.19
SoyTEdb: a comprehensive database of transposable elements in the soybean genome. BMC Genomics (2010) 1.18
Retrotransposon accumulation and satellite amplification mediated by segmental duplication facilitate centromere expansion in rice. Genome Res (2005) 1.18
Rapid DNA loss as a counterbalance to genome expansion through retrotransposon proliferation in plants. Proc Natl Acad Sci U S A (2009) 1.17
De novo identification of LTR retrotransposons in eukaryotic genomes. BMC Genomics (2007) 1.17
Ancient haplotypes resulting from extensive molecular rearrangements in the wheat A genome have been maintained in species of three different ploidy levels. Genome Res (2005) 1.15
Bifurcation and enhancement of autonomous-nonautonomous retrotransposon partnership through LTR Swapping in soybean. Plant Cell (2010) 1.15
Large intraspecific haplotype variability at the Rph7 locus results from rapid and recent divergence in the barley genome. Plant Cell (2005) 1.14
Gene space dynamics during the evolution of Aegilops tauschii, Brachypodium distachyon, Oryza sativa, and Sorghum bicolor genomes. Mol Biol Evol (2011) 1.14
Significant expansion of Vicia pannonica genome size mediated by amplification of a single type of giant retroelement. Genetics (2006) 1.14
Demography and weak selection drive patterns of transposable element diversity in natural populations of Arabidopsis lyrata. Proc Natl Acad Sci U S A (2008) 1.13
Intergenic locations of rice centromeric chromatin. PLoS Biol (2008) 1.13
Dynamic evolution at pericentromeres. Genome Res (2006) 1.12
DNA rearrangement in orthologous orp regions of the maize, rice and sorghum genomes. Genetics (2005) 1.12
Comparative sequence analysis of MONOCULM1-orthologous regions in 14 Oryza genomes. Proc Natl Acad Sci U S A (2009) 1.12
Natural selection on gene function drives the evolution of LTR retrotransposon families in the rice genome. Genome Res (2008) 1.12
Centromeric retrotransposon lineages predate the maize/rice divergence and differ in abundance and activity. Mol Genet Genomics (2007) 1.08
LTR retrotransposons in rice (Oryza sativa, L.): recent burst amplifications followed by rapid DNA loss. BMC Genomics (2007) 1.07
Detection of transposable elements by their compositional bias. BMC Bioinformatics (2004) 1.07
Whole genome surveys of rice, maize and sorghum reveal multiple horizontal transfers of the LTR-retrotransposon Route66 in Poaceae. BMC Evol Biol (2009) 1.06
Insertional polymorphism and antiquity of PDR1 retrotransposon insertions in pisum species. Genetics (2005) 1.06
The role of double-stranded break repair in the creation of phenotypic diversity at cereal VRN1 loci. Genetics (2007) 1.06
Retroelement genome painting: cytological visualization of retroelement expansions in the genera Zea and Tripsacum. Genetics (2006) 1.02
Genetic and epigenetic dynamics of a retrotransposon after allopolyploidization of wheat. Genetics (2010) 1.01
Sustained retrotransposition is mediated by nucleotide deletions and interelement recombinations. Proc Natl Acad Sci U S A (2008) 1.00
Comparative genomic paleontology across plant kingdom reveals the dynamics of TE-driven genome evolution. Genome Biol Evol (2013) 0.98
Evolution of ribosomal DNA-derived satellite repeat in tomato genome. BMC Plant Biol (2009) 0.98
The dynamics of LTR retrotransposon accumulation across 25 million years of panicoid grass evolution. Heredity (Edinb) (2013) 0.98
The landscape of transposable elements in the finished genome of the fungal wheat pathogen Mycosphaerella graminicola. BMC Genomics (2014) 0.98
Genome size in Hieracium subgenus Hieracium (Asteraceae) is strongly correlated with major phylogenetic groups. Ann Bot (2009) 0.97
Bioinformatics and genomic analysis of transposable elements in eukaryotic genomes. Chromosome Res (2011) 0.96
Replication of nonautonomous retroelements in soybean appears to be both recent and common. Plant Physiol (2008) 0.95
Active miniature transposons from a plant genome and its nonrecombining Y chromosome. Genetics (2008) 0.95
Differential impact of retrotransposon populations on the genome of allotetraploid tobacco (Nicotiana tabacum). Mol Genet Genomics (2007) 0.94
MITEs in the promoters of effector genes allow prediction of novel virulence genes in Fusarium oxysporum. BMC Genomics (2013) 0.94
P elements and MITE relatives in the whole genome sequence of Anopheles gambiae. BMC Genomics (2006) 0.93
Plant genomes enclose footprints of past infections by giant virus relatives. Nat Commun (2014) 0.93
Analysis of the giant genomes of Fritillaria (Liliaceae) indicates that a lack of DNA removal characterizes extreme expansions in genome size. New Phytol (2015) 0.93
Localization and transcription of a retrotransposon-derived element on the maize B chromosome. Chromosome Res (2007) 0.92
Ancestral repeats have shaped epigenome and genome composition for millions of years in Arabidopsis thaliana. Nat Commun (2014) 0.92
Meiosis-driven genome variation in plants. Curr Genomics (2007) 0.92
Analysis of plastid and mitochondrial DNA insertions in the nucleus (NUPTs and NUMTs) of six plant species: size, relative age and chromosomal localization. Heredity (Edinb) (2013) 0.91
Exploring the rice dispensable genome using a metagenome-like assembly strategy. Genome Biol (2015) 0.91
Nested Ty3-gypsy retrotransposons of a single Beta procumbens centromere contain a putative chromodomain. Chromosome Res (2009) 0.91
Transposable elements and genome size variations in plants. Genomics Inform (2014) 0.90
The CLUSTAL_X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucleic Acids Res (1997) 175.36
A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences. J Mol Evol (1980) 113.75
Analysis of the genome sequence of the flowering plant Arabidopsis thaliana. Nature (2000) 70.33
A draft sequence of the rice genome (Oryza sativa L. ssp. indica). Science (2002) 42.78
MEGA2: molecular evolutionary genetics analysis software. Bioinformatics (2001) 38.50
A draft sequence of the rice genome (Oryza sativa L. ssp. japonica). Science (2002) 21.26
Nested retrotransposons in the intergenic regions of the maize genome. Science (1996) 12.95
On the formation of spontaneous deletions: the importance of short sequence homologies in the generation of large deletions. Cell (1982) 9.72
The paleontology of intergene retrotransposons of maize. Nat Genet (1998) 8.55
DNA sequence evidence for the segmental allotetraploid origin of maize. Proc Natl Acad Sci U S A (1997) 7.08
Date of the monocot-dicot divergence estimated from chloroplast DNA sequence data. Proc Natl Acad Sci U S A (1989) 6.99
Extensive duplication and reshuffling in the Arabidopsis genome. Plant Cell (2000) 6.16
Intraspecific violation of genetic colinearity and its implications in maize. Proc Natl Acad Sci U S A (2002) 5.85
Plant retrotransposons. Annu Rev Genet (1999) 5.75
Substitution rate comparisons between grasses and palms: synonymous rate differences at the nuclear gene Adh parallel rate differences at the plastid gene rbcL. Proc Natl Acad Sci U S A (1996) 5.52
High intrinsic rate of DNA loss in Drosophila. Nature (1996) 5.51
Genome size reduction through illegitimate recombination counteracts genome expansion in Arabidopsis. Genome Res (2002) 5.15
The genome sequence and structure of rice chromosome 1. Nature (2002) 4.99
Comparing sequenced segments of the tomato and Arabidopsis genomes: large-scale duplication followed by selective gene loss creates a network of synteny. Proc Natl Acad Sci U S A (2000) 4.90
Sequence and analysis of rice chromosome 4. Nature (2002) 4.39
Evidence for DNA loss as a determinant of genome size. Science (2000) 4.25
Abundance, distribution, and transcriptional activity of repetitive elements in the maize genome. Genome Res (2001) 4.17
In-depth view of structure, activity, and evolution of rice chromosome 10. Science (2003) 3.80
Colinearity and its exceptions in orthologous adh regions of maize and sorghum. Proc Natl Acad Sci U S A (1999) 3.60
Evolution of genome size: new approaches to an old problem. Trends Genet (2001) 3.39
Genetic and molecular analysis of the Spm-dependent a-m2 alleles of the maize a locus. Genetics (1987) 3.34
Retrotransposon BARE-1 and Its Role in Genome Evolution in the Genus Hordeum. Plant Cell (1999) 3.30
An active DNA transposon family in rice. Nature (2003) 3.24
A contiguous 66-kb barley DNA sequence provides evidence for reversible genome expansion. Genome Res (2000) 3.10
The age of Alu subfamilies. J Mol Evol (1996) 2.85
Comparative sequence analysis of plant nuclear genomes:m microcolinearity and its many exceptions. Plant Cell (2000) 2.82
High rate of DNA loss in the Drosophila melanogaster and Drosophila virilis species groups. Mol Biol Evol (1998) 2.78
Analysis of a contiguous 211 kb sequence in diploid wheat (Triticum monococcum L.) reveals multiple mechanisms of genome evolution. Plant J (2001) 2.75
Comparative sequence analysis of colinear barley and rice bacterial artificial chromosomes. Plant Physiol (2001) 2.73
Rapid genome divergence at orthologous low molecular weight glutenin loci of the A and Am genomes of wheat. Plant Cell (2003) 2.58
Drosophila euchromatic LTR retrotransposons are much younger than the host species in which they reside. Genome Res (2001) 2.40
Mosaic organization of orthologous sequences in grass genomes. Genome Res (2002) 2.22
Mechanisms and rates of genome expansion and contraction in flowering plants. Genetica (2002) 2.09
Long terminal repeat retrotransposons of Oryza sativa. Genome Biol (2002) 1.97
Formation of solo-LTRs through unequal homologous recombination counterbalances amplifications of LTR retrotransposons in rice Oryza sativa L. Mol Biol Evol (2003) 1.88
Different types and rates of genome evolution detected by comparative sequence analysis of orthologous segments from four cereal genomes. Genetics (2002) 1.76
Genome-wide intraspecific DNA-sequence variations in rice. Curr Opin Plant Biol (2003) 1.56
Genomic gigantism: DNA loss is slow in mountain grasshoppers. Mol Biol Evol (2001) 1.56
Genomic sequencing reveals gene content, genomic organization, and recombination relationships in barley. Funct Integr Genomics (2002) 1.52
Extreme structural heterogeneity among the members of a maize retrotransposon family. Genetics (1998) 1.29
Duplicate and diverge: the evolution of plant genome microstructure. Trends Genet (2001) 1.28
Evolutionary history of the human endogenous retrovirus family ERV9. Mol Biol Evol (2000) 1.26
Structure and coding properties of Bs1, a maize retrovirus-like transposon. Proc Natl Acad Sci U S A (1989) 1.16
Comparative sequence analysis of the sorghum Rph region and the maize Rp1 resistance gene complex. Plant Physiol (2002) 1.08
Effect of the DNA topoisomerase II inhibitor VP-16 on illegitimate recombination in yeast chromosomes. Gene (2002) 0.96
The B73 maize genome: complexity, diversity, and dynamics. Science (2009) 18.73
A unified classification system for eukaryotic transposable elements. Nat Rev Genet (2007) 11.03
The Physcomitrella genome reveals evolutionary insights into the conquest of land by plants. Science (2007) 8.12
The wheat VRN2 gene is a flowering repressor down-regulated by vernalization. Science (2004) 5.86
The genome of woodland strawberry (Fragaria vesca). Nat Genet (2010) 5.86
Rapid recent growth and divergence of rice nuclear genomes. Proc Natl Acad Sci U S A (2004) 5.35
Genome size reduction through illegitimate recombination counteracts genome expansion in Arabidopsis. Genome Res (2002) 5.15
Close split of sorghum and maize genome progenitors. Genome Res (2004) 4.34
Mechanisms of recent genome size variation in flowering plants. Ann Bot (2005) 3.86
Reference genome sequence of the model plant Setaria. Nat Biotechnol (2012) 3.21
The Selaginella genome identifies genetic changes associated with the evolution of vascular plants. Science (2011) 3.10
De novo genome sequencing and comparative genomics of date palm (Phoenix dactylifera). Nat Biotechnol (2011) 2.94
The genome of the pear (Pyrus bretschneideri Rehd.). Genome Res (2012) 2.55
Exceptional diversity, non-random distribution, and rapid evolution of retroelements in the B73 maize genome. PLoS Genet (2009) 2.45
Foxtail millet: a sequence-driven grass model system. Plant Physiol (2009) 2.32
Transposable elements, genes and recombination in a 215-kb contig from wheat chromosome 5A(m). Funct Integr Genomics (2002) 2.23
Promoter mutations of an essential gene for pollen development result in disease resistance in rice. Genes Dev (2006) 2.21
Gene loss and movement in the maize genome. Genome Res (2004) 2.11
Analysis of retrotransposon structural diversity uncovers properties and propensities in angiosperm genome evolution. Proc Natl Acad Sci U S A (2006) 2.05
Uneven chromosome contraction and expansion in the maize genome. Genome Res (2006) 1.96
A complex history of rearrangement in an orthologous region of the maize, sorghum, and rice genomes. Proc Natl Acad Sci U S A (2003) 1.94
A workshop report on wheat genome sequencing: International Genome Research on Wheat Consortium. Genetics (2004) 1.94
Geographical distribution and diversity of bacteria associated with natural populations of Drosophila melanogaster. Appl Environ Microbiol (2007) 1.80
Different types and rates of genome evolution detected by comparative sequence analysis of orthologous segments from four cereal genomes. Genetics (2002) 1.76
High-Cot sequence analysis of the maize genome. Plant J (2003) 1.65
The regulatory regions required for B' paramutation and expression are located far upstream of the maize b1 transcribed sequences. Genetics (2002) 1.61
Distribution, diversity, evolution, and survival of Helitrons in the maize genome. Proc Natl Acad Sci U S A (2009) 1.60
Dynamic evolution of oryza genomes is revealed by comparative genomic analysis of a genus-wide vertical data set. Plant Cell (2008) 1.55
Genomic sequencing reveals gene content, genomic organization, and recombination relationships in barley. Funct Integr Genomics (2002) 1.52
Analysis and mapping of randomly chosen bacterial artificial chromosome clones from hexaploid bread wheat. Proc Natl Acad Sci U S A (2005) 1.50
Plant centromere organization: a dynamic structure with conserved functions. Trends Genet (2007) 1.50
Genetic control of branching in foxtail millet. Proc Natl Acad Sci U S A (2004) 1.50
Structural analysis of the maize rp1 complex reveals numerous sites and unexpected mechanisms of local rearrangement. Plant Cell (2002) 1.49
Recombination, rearrangement, reshuffling, and divergence in a centromeric region of rice. Proc Natl Acad Sci U S A (2005) 1.48
G protein activation without a GEF in the plant kingdom. PLoS Genet (2012) 1.43
The evolution of nuclear genome structure in seed plants. Am J Bot (2004) 1.41
Structure and evolution of the r/b chromosomal regions in rice, maize and sorghum. Genetics (2004) 1.37
Comparative analyses reveal high levels of conserved colinearity between the finger millet and rice genomes. Theor Appl Genet (2007) 1.36
Do genetic recombination and gene density shape the pattern of DNA elimination in rice long terminal repeat retrotransposons? Genome Res (2009) 1.33
On the tetraploid origin of the maize genome. Comp Funct Genomics (2004) 1.32
The maize genome as a model for efficient sequence analysis of large plant genomes. Curr Opin Plant Biol (2006) 1.31
Detailed analysis of a contiguous 22-Mb region of the maize genome. PLoS Genet (2009) 1.29
Structure-based discovery and description of plant and animal Helitrons. Proc Natl Acad Sci U S A (2009) 1.27
Methylation-spanning linker libraries link gene-rich regions and identify epigenetic boundaries in Zea mays. Genome Res (2002) 1.25
A GeneTrek analysis of the maize genome. Proc Natl Acad Sci U S A (2007) 1.23
Divergent perspectives on GM food. Nat Biotechnol (2002) 1.19
Gene enrichment in maize with hypomethylated partial restriction (HMPR) libraries. Genome Res (2005) 1.19
Pathogen corruption and site-directed recombination at a plant disease resistance gene cluster. Genome Res (2008) 1.19
Structure and evolution of the Cinful retrotransposon family of maize. Genome (2003) 1.16
Transposable element origins of epigenetic gene regulation. Curr Opin Plant Biol (2011) 1.16
DNA rearrangement in orthologous orp regions of the maize, rice and sorghum genomes. Genetics (2005) 1.12
Comparative sequence analysis of MONOCULM1-orthologous regions in 14 Oryza genomes. Proc Natl Acad Sci U S A (2009) 1.12
Natural selection on gene function drives the evolution of LTR retrotransposon families in the rice genome. Genome Res (2008) 1.12
Function and transcript analysis of gibberellin-biosynthetic enzymes in wheat. Planta (2005) 1.11
The genetic basis for inflorescence variation between foxtail and green millet (poaceae). Genetics (2005) 1.10
Comparative sequence analysis of the sorghum Rph region and the maize Rp1 resistance gene complex. Plant Physiol (2002) 1.08
An examination of targeted gene neighborhoods in strawberry. BMC Plant Biol (2010) 1.08
Novel genes are enriched in normalized cDNA libraries from drought-stressed seedlings of rice (Oryza sativa L. subsp. indica cv. Nagina 22). Genome (2002) 1.06
Identification of stress-responsive genes in an indica rice (Oryza sativa L.) using ESTs generated from drought-stressed seedlings. J Exp Bot (2006) 1.06
Sequence analysis of bacterial artificial chromosome clones from the apospory-specific genomic region of Pennisetum and Cenchrus. Plant Physiol (2008) 1.03
Permanent genetic resources added to molecular ecology resources database 1 October 2012-30 November 2012. Mol Ecol Resour (2013) 1.00
Permanent Genetic Resources added to Molecular Ecology Resources Database 1 April 2010 - 31 May 2010. Mol Ecol Resour (2010) 0.97
Genetic control and comparative genomic analysis of flowering time in Setaria (Poaceae). G3 (Bethesda) (2013) 0.97
Discovery and assembly of repeat family pseudomolecules from sparse genomic sequence data using the Assisted Automated Assembler of Repeat Families (AAARF) algorithm. BMC Bioinformatics (2008) 0.95
The genetic map of finger millet, Eleusine coracana. Theor Appl Genet (2006) 0.93
Grass genome structure and evolution. Genome Dyn (2008) 0.93
Brachypodium distachyon and Setaria viridis: Model Genetic Systems for the Grasses. Annu Rev Plant Biol (2015) 0.92
Spatio-temporal patterns of genome evolution in allotetraploid species of the genus Oryza. Plant J (2010) 0.90
Evolutionary history and positional shift of a rice centromere. Genetics (2007) 0.89
The DAWGPAWS pipeline for the annotation of genes and transposable elements in plant genomes. Plant Methods (2009) 0.89
Switchgrass (Panicum virgatum L.) polyubiquitin gene (PvUbi1 and PvUbi2) promoters for use in plant transformation. BMC Biotechnol (2011) 0.89
Methylation-sensitive linking libraries enhance gene-enriched sequencing of complex genomes and map DNA methylation domains. BMC Genomics (2008) 0.88
Centromere retention and loss during the descent of maize from a tetraploid ancestor. Proc Natl Acad Sci U S A (2012) 0.87
Population genetics of Setaria viridis, a new model system. Mol Ecol (2014) 0.87
Insular organization of gene space in grass genomes. PLoS One (2013) 0.85
Isolation and bioinformatic analysis of a novel transposable element, ISCbe4, from the hyperthermophilic bacterium, Caldicellulosiruptor bescii. J Ind Microbiol Biotechnol (2013) 0.85
High-throughput discovery of mutations in tef semi-dwarfing genes by next-generation sequencing analysis. Genetics (2012) 0.85
Natural insertions in rice commonly form tandem duplications indicative of patch-mediated double-strand break induction and repair. Proc Natl Acad Sci U S A (2014) 0.85
Dynamic gene copy number variation in collinear regions of grass genomes. Mol Biol Evol (2011) 0.84
Fine mapping of the Pc locus of Sorghum bicolor, a gene controlling the reaction to a fungal pathogen and its host-selective toxin. Theor Appl Genet (2007) 0.83
Association mapping, patterns of linkage disequilibrium and selection in the vicinity of the PHYTOCHROME C gene in pearl millet. Theor Appl Genet (2013) 0.83
Fine-mapping and identification of a candidate gene underlying the d2 dwarfing phenotype in pearl millet, Cenchrus americanus (L.) Morrone. G3 (Bethesda) (2013) 0.83
Haplotype Analysis and Linkage Disequilibrium at Five Loci in Eragrostis tef. G3 (Bethesda) (2012) 0.81
Genomic colinearity as a tool for plant gene isolation. Methods Mol Biol (2003) 0.80
Current status and prospects for the study of Nicotiana genomics, genetics, and nicotine biosynthesis genes. Mol Genet Genomics (2015) 0.80
Trends in comparative genetics and their potential impacts on wheat and barley research. Plant Mol Biol (2002) 0.80
Genomic resources for gene discovery, functional genome annotation, and evolutionary studies of maize and its close relatives. Genetics (2013) 0.79
Frequent genic rearrangements in two regions of grass genomes identified by comparative sequence analysis. Comp Funct Genomics (2002) 0.78
Isolation and diversity analysis of resistance gene homologues from switchgrass. G3 (Bethesda) (2013) 0.78
Enchilada redux: how complete is your genome sequence? New Phytol (2008) 0.77
Epigenetics of the epigenome. Curr Opin Plant Biol (2011) 0.76
Variation in allelic expression associated with a recombination hotspot in Zea mays. Plant J (2014) 0.76