Published in Mol Membr Biol on June 18, 2004
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Ins and outs of major facilitator superfamily antiporters. Annu Rev Microbiol (2008) 3.11
Structure of the multidrug transporter EmrD from Escherichia coli. Science (2006) 2.93
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Comparative genomic analyses of the bacterial phosphotransferase system. Microbiol Mol Biol Rev (2005) 2.26
A functional genomics approach to establish the complement of carbohydrate transporters in Streptococcus pneumoniae. PLoS One (2012) 1.53
Arabidopsis sucrose transporter AtSUC9. High-affinity transport activity, intragenic control of expression, and early flowering mutant phenotype. Plant Physiol (2006) 1.37
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Conserved and diversified gene families of monovalent cation/h(+) antiporters from algae to flowering plants. Front Plant Sci (2012) 1.20
Evolution of plant sucrose uptake transporters. Front Plant Sci (2012) 1.18
Sugar binding in lactose permease: anomeric state of a disaccharide influences binding structure. J Mol Biol (2007) 1.15
Three two-component transporters with channel-like properties have monovalent cation/proton antiport activity. Proc Natl Acad Sci U S A (2007) 1.10
Phylogenetic characterization of transport protein superfamilies: superiority of SuperfamilyTree programs over those based on multiple alignments. J Mol Microbiol Biotechnol (2012) 1.06
Structure and function of the reduced folate carrier a paradigm of a major facilitator superfamily mammalian nutrient transporter. Vitam Horm (2008) 1.05
How beta-lactam antibiotics enter bacteria: a dialogue with the porins. PLoS One (2009) 1.04
Molecular modeling of PepT1--towards a structure. J Membr Biol (2007) 1.00
Amino acid export in plants: a missing link in nitrogen cycling. Mol Plant (2011) 0.99
Major facilitator superfamily porters, LacY, FucP and XylE of Escherichia coli appear to have evolved positionally dissimilar catalytic residues without rearrangement of 3-TMS repeat units. J Mol Microbiol Biotechnol (2014) 0.95
Structural insight into the PTS sugar transporter EIIC. Biochim Biophys Acta (2014) 0.94
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NHA-oc/NHA2: a mitochondrial cation-proton antiporter selectively expressed in osteoclasts. Bone (2007) 0.89
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The transporter-opsin-G protein-coupled receptor (TOG) superfamily. FEBS J (2013) 0.88
The American cranberry: first insights into the whole genome of a species adapted to bog habitat. BMC Plant Biol (2014) 0.88
Comprehensive analysis of transport proteins encoded within the genome of Bdellovibrio bacteriovorus. Genomics (2007) 0.87
Biology of the major facilitative folate transporters SLC19A1 and SLC46A1. Curr Top Membr (2014) 0.85
Structural and functional characterization of AtPTR3, a stress-induced peptide transporter of Arabidopsis. J Mol Model (2005) 0.85
Comparative genomics of transport proteins in developmental bacteria: Myxococcus xanthus and Streptomyces coelicolor. BMC Microbiol (2013) 0.84
A novel fluorescent assay for sucrose transporters. Plant Methods (2012) 0.84
Catabolic flexibility of mammalian-associated lactobacilli. Microb Cell Fact (2013) 0.83
Holins in bacteria, eukaryotes, and archaea: multifunctional xenologues with potential biotechnological and biomedical applications. J Bacteriol (2014) 0.83
Agp2, a member of the yeast amino acid permease family, positively regulates polyamine transport at the transcriptional level. PLoS One (2013) 0.83
The MagA protein of Magnetospirilla is not involved in bacterial magnetite biomineralization. J Bacteriol (2011) 0.83
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Two members of a network of putative Na+/H+ antiporters are involved in salt and pH tolerance of the freshwater cyanobacterium Synechococcus elongatus. J Bacteriol (2008) 0.82
Purification and characterization of mammalian glucose transporters expressed in Pichia pastoris. Protein Expr Purif (2009) 0.82
AtNHX5 and AtNHX6 Control Cellular K+ and pH Homeostasis in Arabidopsis: Three Conserved Acidic Residues Are Essential for K+ Transport. PLoS One (2015) 0.81
High affinity S-Adenosylmethionine plasma membrane transporter of Leishmania is a member of the folate biopterin transporter (FBT) family. J Biol Chem (2010) 0.81
Identification of amino acids important for substrate specificity in sucrose transporters using gene shuffling. J Biol Chem (2012) 0.81
The roles of the cation transporters CHX21 and CHX23 in the development of Arabidopsis thaliana. J Exp Bot (2011) 0.80
The C-terminal domain of the neutral amino acid transporter SNAT2 regulates transport activity through voltage-dependent processes. Biochem J (2011) 0.80
A novel AtKEA gene family, homolog of bacterial K+/H+ antiporters, plays potential roles in K+ homeostasis and osmotic adjustment in Arabidopsis. PLoS One (2013) 0.79
Nhe1 is essential for potassium but not calcium facilitation of cell motility and the monovalent cation requirement for chemotactic orientation in Dictyostelium discoideum. Eukaryot Cell (2011) 0.79
Isolation and characterization of LHT-type plant amino acid transporter gene from Panax ginseng Meyer. J Ginseng Res (2013) 0.79
Establishing homology between mitochondrial calcium uniporters, prokaryotic magnesium channels and chlamydial IncA proteins. Microbiology (2014) 0.79
Transferring functional annotations of membrane transporters on the basis of sequence similarity and sequence motifs. BMC Bioinformatics (2013) 0.78
Structure, phylogeny, allelic haplotypes and expression of sucrose transporter gene families in Saccharum. BMC Genomics (2016) 0.78
Expression and functional analysis of two NhaD type antiporters from the halotolerant and alkaliphilic Halomonas sp. Y2. Extremophiles (2016) 0.76
Linking 3D and 2D binding kinetics of membrane proteins by multiscale simulations. Protein Sci (2014) 0.76
Helical unwinding and side-chain unlocking unravel the outward open conformation of the melibiose transporter. Sci Rep (2016) 0.75
Glutamate Transporter Homolog-based Model Predicts That Anion-π Interaction Is the Mechanism for the Voltage-dependent Response of Prestin. J Biol Chem (2015) 0.75
Transport protein evolution deduced from analysis of sequence, topology and structure. Curr Opin Struct Biol (2016) 0.75
Eukaryotic transporters for hydroxyderivatives of benzoic acid. Sci Rep (2017) 0.75
Bacterial production and reconstitution in proteoliposomes of Solanum lycopersicum CAT2: a transporter of basic amino acids and organic cations. Plant Mol Biol (2017) 0.75
TCDB: the Transporter Classification Database for membrane transport protein analyses and information. Nucleic Acids Res (2006) 5.31
The transporter classification (TC) system, 2002. Crit Rev Biochem Mol Biol (2002) 2.56
Combinatorial transcriptional control of the lactose operon of Escherichia coli. Proc Natl Acad Sci U S A (2007) 2.51
Type II protein secretion and its relationship to bacterial type IV pili and archaeal flagella. Microbiology (2003) 2.48
Comparative genomic analyses of the bacterial phosphotransferase system. Microbiol Mol Biol Rev (2005) 2.26
Transcriptome analysis of Crp-dependent catabolite control of gene expression in Escherichia coli. J Bacteriol (2004) 2.20
Two families of mechanosensitive channel proteins. Microbiol Mol Biol Rev (2003) 2.12
Protein-translocating outer membrane porins of Gram-negative bacteria. Biochim Biophys Acta (2002) 1.83
The multidrug/oligosaccharidyl-lipid/polysaccharide (MOP) exporter superfamily. Eur J Biochem (2003) 1.76
The major facilitator superfamily (MFS) revisited. FEBS J (2012) 1.72
A genomic analysis of the archaeal system Ignicoccus hospitalis-Nanoarchaeum equitans. Genome Biol (2008) 1.60
Functional interactions between the carbon and iron utilization regulators, Crp and Fur, in Escherichia coli. J Bacteriol (2005) 1.54
Gap junctional proteins of animals: the innexin/pannexin superfamily. Prog Biophys Mol Biol (2007) 1.41
The beta-barrel finder (BBF) program, allowing identification of outer membrane beta-barrel proteins encoded within prokaryotic genomes. Protein Sci (2002) 1.38
A web-based Tree View (TV) program for the visualization of phylogenetic trees. J Mol Microbiol Biotechnol (2002) 1.37
The ascorbate transporter of Escherichia coli. J Bacteriol (2003) 1.36
The ion transporter superfamily. Biochim Biophys Acta (2003) 1.36
The general protein secretory pathway: phylogenetic analyses leading to evolutionary conclusions. Biochim Biophys Acta (2003) 1.34
The IUBMB-endorsed transporter classification system. Mol Biotechnol (2004) 1.32
Sequence and phylogenetic analyses of the twin-arginine targeting (Tat) protein export system. Arch Microbiol (2002) 1.30
The principal chloroquine resistance protein of Plasmodium falciparum is a member of the drug/metabolite transporter superfamily. Microbiology (2004) 1.29
A simple sensitive program for detecting internal repeats in sets of multiply aligned homologous proteins. J Mol Microbiol Biotechnol (2002) 1.24
Bioinformatic analyses of transmembrane transport: novel software for deducing protein phylogeny, topology, and evolution. J Mol Microbiol Biotechnol (2009) 1.21
Catabolite repression and activation in Bacillus subtilis: dependency on CcpA, HPr, and HprK. J Bacteriol (2005) 1.20
The amino acid-polyamine-organocation superfamily. J Mol Microbiol Biotechnol (2012) 1.20
Extra domains in secondary transport carriers and channel proteins. Biochim Biophys Acta (2006) 1.17
Transport capabilities of eleven gram-positive bacteria: comparative genomic analyses. Biochim Biophys Acta (2007) 1.14
Membrane porters of ATP-binding cassette transport systems are polyphyletic. J Membr Biol (2009) 1.14
A transporter of Escherichia coli specific for L- and D-methionine is the prototype for a new family within the ABC superfamily. Arch Microbiol (2003) 1.14
In silico and transcriptional analysis of carbohydrate uptake systems of Streptomyces coelicolor A3(2). J Bacteriol (2004) 1.14
Web-based programs for the display and analysis of transmembrane alpha-helices in aligned protein sequences. J Mol Microbiol Biotechnol (2003) 1.13
Ser/Thr/Tyr protein phosphorylation in bacteria - for long time neglected, now well established. J Mol Microbiol Biotechnol (2005) 1.13
The tripartite tricarboxylate transporter (TTT) family. Res Microbiol (2003) 1.13
Overexpression of the Escherichia coli sugE gene confers resistance to a narrow range of quaternary ammonium compounds. J Bacteriol (2002) 1.11
Protein secretion systems of Pseudomonas aeruginosa and P fluorescens. Biochim Biophys Acta (2003) 1.10
The p-type ATPase superfamily. J Mol Microbiol Biotechnol (2010) 1.09
The bile/arsenite/riboflavin transporter (BART) superfamily. FEBS J (2007) 1.07
Phylogenetic characterization of transport protein superfamilies: superiority of SuperfamilyTree programs over those based on multiple alignments. J Mol Microbiol Biotechnol (2012) 1.06
Biofilm-defective mutants of Bacillus subtilis. J Mol Microbiol Biotechnol (2004) 1.05
Multidrug resistance: phylogenetic characterization of superfamilies of secondary carriers that include drug exporters. Methods Mol Biol (2010) 1.05
Phylogeny of phosphoryl transfer proteins of the phosphoenolpyruvate-dependent sugar-transporting phosphotransferase system. Res Microbiol (2002) 1.05
Regulation of sigL expression by the catabolite control protein CcpA involves a roadblock mechanism in Bacillus subtilis: potential connection between carbon and nitrogen metabolism. J Bacteriol (2005) 1.04
Evolutionary origins of members of a superfamily of integral membrane cytochrome c biogenesis proteins. Biochim Biophys Acta (2007) 1.03
Lysophospholipid flipping across the Escherichia coli inner membrane catalyzed by a transporter (LplT) belonging to the major facilitator superfamily. J Biol Chem (2005) 1.03
Reversing transmembrane electron flow: the DsbD and DsbB protein families. J Mol Microbiol Biotechnol (2003) 1.03
The IUBMB-endorsed transporter classification system. Methods Mol Biol (2003) 1.03
BioV Suite--a collection of programs for the study of transport protein evolution. FEBS J (2012) 1.03
Bioinformatic characterization of p-type ATPases encoded within the fully sequenced genomes of 26 eukaryotes. J Membr Biol (2009) 1.01
Molecular modeling of the bacterial outer membrane receptor energizer, ExbBD/TonB, based on homology with the flagellar motor, MotAB. Biochim Biophys Acta (2003) 0.99
Domain analysis of transcriptional regulators bearing PTS regulatory domains. Res Microbiol (2002) 0.99
Evolutionary relationship between 5+5 and 7+7 inverted repeat folds within the amino acid-polyamine-organocation superfamily. Proteins (2013) 0.98
Education for Humanity. Water Air Soil Pollut (2009) 0.98
A novel mechanism of transposon-mediated gene activation. PLoS Genet (2009) 0.96
The urea transporter (UT) family: bioinformatic analyses leading to structural, functional, and evolutionary predictions. Receptors Channels (2003) 0.95
The phagosomal nutrient transporter (Pht) family. Microbiology (2008) 0.95
Bioinformatic analyses of the bacterial L-ascorbate phosphotransferase system permease family. J Mol Microbiol Biotechnol (2003) 0.95
Carbonic anhydrases fused to anion transporters of the SulP family: evidence for a novel type of bicarbonate transporter. J Mol Microbiol Biotechnol (2004) 0.95
Sequence similarity between the channel-forming domains of voltage-gated ion channel proteins and the C-terminal domains of secondary carriers of the major facilitator superfamily. Microbiology (2002) 0.94
Topological predictions for integral membrane permeases of the phosphoenolpyruvate:sugar phosphotransferase system. J Mol Microbiol Biotechnol (2006) 0.94
A mechanism of transposon-mediated directed mutation. Mol Microbiol (2009) 0.94
Protein-translocating trimeric autotransporters of gram-negative bacteria. J Bacteriol (2006) 0.94
The copper transporter (Ctr) family of Cu+ uptake systems. J Mol Microbiol Biotechnol (2006) 0.94
Regulation of carbon utilization by sulfur availability in Escherichia coli and Salmonella typhimurium. Microbiology (2002) 0.93
In vitro phosphorylation of key metabolic enzymes from Bacillus subtilis: PrkC phosphorylates enzymes from different branches of basic metabolism. J Mol Microbiol Biotechnol (2010) 0.93
Evolution of the oligopeptide transporter family. J Membr Biol (2011) 0.93
The bacterial intimins and invasins: a large and novel family of secreted proteins. PLoS One (2010) 0.92
Animal Ca2+ release-activated Ca2+ (CRAC) channels appear to be homologous to and derived from the ubiquitous cation diffusion facilitators. BMC Res Notes (2010) 0.92
Comparative genomics of metabolic capacities of regulons controlled by cis-regulatory RNA motifs in bacteria. BMC Genomics (2013) 0.91
Functional Promiscuity of Homologues of the Bacterial ArsA ATPases. Int J Microbiol (2010) 0.91
Transposon-mediated adaptive and directed mutations and their potential evolutionary benefits. J Mol Microbiol Biotechnol (2012) 0.91
Sec61beta--a component of the archaeal protein secretory system. Trends Biochem Sci (2002) 0.90
Topological and phylogenetic analyses of bacterial holin families and superfamilies. Biochim Biophys Acta (2013) 0.90
A stochastic automaton shows how enzyme assemblies may contribute to metabolic efficiency. BMC Syst Biol (2008) 0.90
Pathways of transport protein evolution: recent advances. Biol Chem (2011) 0.89
Sequence similarity between multidrug resistance efflux pumps of the ABC and RND superfamilies. Microbiology (2004) 0.88
Functional characterization of the heterooligomeric EbrAB multidrug efflux transporter of Bacillus subtilis. Biochemistry (2007) 0.88
The transporter-opsin-G protein-coupled receptor (TOG) superfamily. FEBS J (2013) 0.88
Regulation of crp gene expression by the catabolite repressor/activator, Cra, in Escherichia coli. J Mol Microbiol Biotechnol (2014) 0.87
Comprehensive analysis of transport proteins encoded within the genome of Bdellovibrio bacteriovorus. Genomics (2007) 0.87
Expansion of the APC superfamily of secondary carriers. Proteins (2014) 0.87
The iron/lead transporter superfamily of Fe/Pb2+ uptake systems. J Mol Microbiol Biotechnol (2006) 0.86
Bioinformatic characterization of the 4-Toluene Sulfonate Uptake Permease (TSUP) family of transmembrane proteins. Biochim Biophys Acta (2011) 0.86
The ubiquitous ThrE family of putative transmembrane amino acid efflux transporters. Res Microbiol (2002) 0.85
Biochemical characterization of phosphoryl transfer involving HPr of the phosphoenolpyruvate-dependent phosphotransferase system in Treponema denticola, an organism that lacks PTS permeases. Biochemistry (2005) 0.85
Topological analysis of integral membrane constituents of prokaryotic ABC efflux systems. Res Microbiol (2004) 0.85
Precise excision of IS5 from the intergenic region between the fucPIK and the fucAO operons and mutational control of fucPIK operon expression in Escherichia coli. J Bacteriol (2010) 0.84
Regulation of pho regulon gene expression by the carbon control protein A, CcpA, in Bacillus subtilis. J Mol Microbiol Biotechnol (2005) 0.84
Defense against cannibalism: the SdpI family of bacterial immunity/signal transduction proteins. J Membr Biol (2010) 0.84
Bioinformatic analyses of integral membrane transport proteins encoded within the genome of the planctomycetes species, Rhodopirellula baltica. Biochim Biophys Acta (2013) 0.83
Identifying relevant data for a biological database: handcrafted rules versus machine learning. IEEE/ACM Trans Comput Biol Bioinform (2011) 0.83
Evolutionary relationships of ATP-Binding Cassette (ABC) uptake porters. BMC Microbiol (2013) 0.83
Comparative analyses of transport proteins encoded within the genomes of Mycobacterium tuberculosis and Mycobacterium leprae. Biochim Biophys Acta (2011) 0.83
Reliability of nine programs of topological predictions and their application to integral membrane channel and carrier proteins. J Mol Microbiol Biotechnol (2014) 0.82
Sequence analyses of cyanobacterial bicarbonate transporters and their homologues. J Mol Microbiol Biotechnol (2004) 0.82
Evolutionary appearance of H+-translocating pyrophosphatases. Microbiology (2006) 0.82
Active transport in communication, protection and nutrition. J Mol Microbiol Biotechnol (2007) 0.81
Bioinformatic characterization of the trimeric intracellular cation-specific channel protein family. J Membr Biol (2011) 0.81