Characterization of hnRNP K protein-RNA interactions.

PubWeight™: 0.93‹?›

🔗 View Article (PMID 15351640)

Published in J Mol Biol on September 24, 2004

Authors

Karolina Klimek-Tomczak1, Lucjan S Wyrwicz, Sanjeev Jain, Karol Bomsztyk, Jerzy Ostrowski

Author Affiliations

1: Department of Gastroenterology, Medical Center for Postgraduate Education at Maria Skłodowska-Curie Memorial Cancer Center and Institute of Oncology, 02-781 Warsaw, Poland.

Articles by these authors

The Phaeodactylum genome reveals the evolutionary history of diatom genomes. Nature (2008) 6.70

Protocol for the fast chromatin immunoprecipitation (ChIP) method. Nat Protoc (2006) 6.24

hnRNP K: one protein multiple processes. Bioessays (2004) 2.96

Fast chromatin immunoprecipitation assay. Nucleic Acids Res (2006) 2.39

Modeling oncogenic signaling in colon tumors by multidirectional analyses of microarray data directed for maximization of analytical reliability. PLoS One (2010) 2.32

Plant nitric oxide synthase: a never-ending story? Trends Plant Sci (2006) 2.12

Comprehensive classification of nucleotidyltransferase fold proteins: identification of novel families and their representatives in human. Nucleic Acids Res (2009) 2.09

c-Src-mediated phosphorylation of hnRNP K drives translational activation of specifically silenced mRNAs. Mol Cell Biol (2002) 1.98

Members of the poly (rC) binding protein family stimulate the activity of the c-myc internal ribosome entry segment in vitro and in vivo. Oncogene (2003) 1.83

ORFeus: Detection of distant homology using sequence profiles and predicted secondary structure. Nucleic Acids Res (2003) 1.71

Molecular phylogenetics of the RrmJ/fibrillarin superfamily of ribose 2'-O-methyltransferases. Gene (2003) 1.54

Gender-specific association of TSNAX/DISC1 locus for schizophrenia and bipolar affective disorder in South Indian population. J Hum Genet (2012) 1.43

mRNA cap-1 methyltransferase in the SARS genome. Cell (2003) 1.42

Apolipoprotein E4 and brain white matter integrity in Alzheimer's disease: tract-based spatial statistics study under 3-Tesla MRI. Neurodegener Dis (2012) 1.42

Predicting protein structures accurately. Science (2004) 1.39

The transcription factor encyclopedia. Genome Biol (2012) 1.28

Microplate-based chromatin immunoprecipitation method, Matrix ChIP: a platform to study signaling of complex genomic events. Nucleic Acids Res (2008) 1.27

Heterogeneous nuclear ribonucleoprotein K protein associates with multiple mitochondrial transcripts within the organelle. J Biol Chem (2001) 1.26

Endotoxin mediates recruitment of RNA polymerase II to target genes in acute renal failure. J Am Soc Nephrol (2008) 1.23

BRG1 increases transcription of proinflammatory genes in renal ischemia. J Am Soc Nephrol (2009) 1.17

Boolean network analysis of a neurotransmitter signaling pathway. J Theor Biol (2006) 1.13

Maleate nephrotoxicity: mechanisms of injury and correlates with ischemic/hypoxic tubular cell death. Am J Physiol Renal Physiol (2007) 1.12

Better outcome of schizophrenia in India: a natural selection against severe forms? Schizophr Bull (2008) 1.12

Renal ischemia-induced cholesterol loading: transcription factor recruitment and chromatin remodeling along the HMG CoA reductase gene. Am J Pathol (2008) 1.12

Landscape of the hnRNP K protein-protein interactome. Proteomics (2006) 1.12

Unexpected domain composition of MACC1 links MET signaling and apoptosis. Acta Biochim Pol (2009) 1.12

Pharmacogenomics: a path to predictive medicine for schizophrenia. Pharmacogenomics (2006) 1.10

'A disgrace to a civilised community': colonial psychiatry and the visit of Edward Mapother to South Asia, 1937-8. Clio Med (2009) 1.09

Molecular defense mechanisms of Barrett's metaplasia estimated by an integrative genomics. J Mol Med (Berl) (2007) 1.06

Transient recruitment of the hnRNP K protein to inducibly transcribed gene loci. Nucleic Acids Res (2003) 1.06

Ligand.Info small-molecule Meta-Database. Comb Chem High Throughput Screen (2004) 1.02

High frequency of BRCA1 founder mutations in Polish women with nonfamilial breast cancer. Fam Cancer (2012) 1.02

Cooperative binding of the hnRNP K three KH domains to mRNA targets. FEBS Lett (2004) 1.01

Yeast hnRNP K-like genes are involved in regulation of the telomeric position effect and telomere length. Mol Cell Biol (2002) 1.01

Integrating genomics, proteomics and bioinformatics in translational studies of molecular medicine. Expert Rev Mol Diagn (2009) 1.01

Pooled sample-based GWAS: a cost-effective alternative for identifying colorectal and prostate cancer risk variants in the Polish population. PLoS One (2012) 1.00

Synergistic activation of the rat laminin gamma1 chain promoter by the gut-enriched Kruppel-like factor (GKLF/KLF4) and Sp1. Nucleic Acids Res (2002) 1.00

Quantitative detection for low levels of Helicobacter pylori infection in experimentally infected mice by real-time PCR. J Microbiol Methods (2003) 0.97

Heterogeneous nuclear ribonucleoprotein K contributes to angiotensin II stimulation of vascular endothelial growth factor mRNA translation. Am J Physiol Renal Physiol (2007) 0.97

Target specific compound identification using a support vector machine. Comb Chem High Throughput Screen (2007) 0.97

The fold recognition of CP2 transcription factors gives new insights into the function and evolution of tumor suppressor protein p53. Cell Cycle (2008) 0.96

Direct recruitment of ERK cascade components to inducible genes is regulated by heterogeneous nuclear ribonucleoprotein (hnRNP) K. J Biol Chem (2011) 0.96

Duchenne muscular dystrophy: a clinical, histopathological and genetic study at a neurology tertiary care center in Southern India. Neurol India (2010) 0.95

Activation of Wnt/β-catenin signaling increases apoptosis in melanoma cells treated with trail. PLoS One (2013) 0.95

Glycogen synthase kinase 3beta as a likely target for the action of lithium on circadian clocks. Chronobiol Int (2004) 0.94

An integrated LC-ESI-MS platform for quantitation of serum peptide ladders. Application for colon carcinoma study. Proteomics Clin Appl (2009) 0.94

AutoMotif Server for prediction of phosphorylation sites in proteins using support vector machine: 2007 update. J Mol Model (2007) 0.94

MLC1 gene is associated with schizophrenia and bipolar disorder in Southern India. Biol Psychiatry (2005) 0.93

Lack of evidence for association of primary sclerosing cholangitis and primary biliary cirrhosis with risk alleles for Crohn's disease in Polish patients. BMC Med Genet (2008) 0.92

Impairment of verbal learning and memory and executive function in unaffected siblings of probands with bipolar disorder. Bipolar Disord (2010) 0.92

Perspectives towards predictive testing in Huntington disease. Neurol India (2006) 0.91

Mapping the substrate binding site of phenylacetone monooxygenase from Thermobifida fusca by mutational analysis. Appl Environ Microbiol (2011) 0.91

Acyl-CoA synthetase 1 is induced by Gram-negative bacteria and lipopolysaccharide and is required for phospholipid turnover in stimulated macrophages. J Biol Chem (2013) 0.91

Association of serotonin transporter gene polymorphisms with obsessive-compulsive disorder (OCD) in a south Indian population. Indian J Med Res (2010) 0.90

Association studies of catechol-O-methyltransferase (COMT) gene with schizophrenia and response to antipsychotic treatment. Pharmacogenomics (2009) 0.90

Heterogeneous nuclear ribonucleoprotein K enhances insulin-induced expression of mitochondrial UCP2 protein. J Biol Chem (2004) 0.90

Three clinical variants of gastroesophageal reflux disease form two distinct gene expression signatures. J Mol Med (Berl) (2006) 0.90

Comprehensive analysis of the palindromic motif TCTCGCGAGA: a regulatory element of the HNRNPK promoter. DNA Res (2010) 0.90

Direct recruitment of insulin receptor and ERK signaling cascade to insulin-inducible gene loci. Diabetes (2010) 0.89

Genetic susceptibility to schizophrenia: role of dopaminergic pathway gene polymorphisms. Pharmacogenomics (2009) 0.89

Microplate-based platform for combined chromatin and DNA methylation immunoprecipitation assays. BMC Mol Biol (2011) 0.89

Duration of reappearance of gingival melanin pigmentation after surgical removal - A clinical study. J Indian Soc Periodontol (2010) 0.88

Deletion of the APOBEC3B gene strongly impacts susceptibility to falciparum malaria. Infect Genet Evol (2011) 0.88

The fast chromatin immunoprecipitation method. Methods Mol Biol (2009) 0.86

A common cis-element in promoters of protein synthesis and cell cycle genes. Acta Biochim Pol (2007) 0.86

Transcription of laminin gamma1 chain gene in rat mesangial cells: constitutive and inducible RNA polymerase II recruitment and chromatin states. Am J Physiol Renal Physiol (2008) 0.86

Increased expression of ribosomal protein S2 in liver tumors, posthepactomized livers, and proliferating hepatocytes in vitro. Acta Biochim Pol (2002) 0.86

SCA 1, SCA 2 & SCA 3/MJD mutations in ataxia syndromes in southern India. Indian J Med Res (2007) 0.86

Functional features of gene expression profiles differentiating gastrointestinal stromal tumours according to KIT mutations and expression. BMC Cancer (2009) 0.86

Founder haplotype for Machado-Joseph disease in the Indian population: novel insights from history and polymorphism studies. Arch Neurol (2005) 0.85

The hppA gene of Helicobacter pylori encodes the class C acid phosphatase precursor. FEBS Lett (2002) 0.85

Detailed mechanism of squalene epoxidase inhibition by terbinafine. J Chem Inf Model (2011) 0.85

Free-energy distribution of binary protein-protein binding suggests cross-species interactome differences. Proc Natl Acad Sci U S A (2006) 0.85

Heterogeneous nuclear ribonucleoprotein (HnRNP) K genome-wide binding survey reveals its role in regulating 3'-end RNA processing and transcription termination at the early growth response 1 (EGR1) gene through XRN2 exonuclease. J Biol Chem (2013) 0.85

Structure prediction, evolution and ligand interaction of CHASE domain. FEBS Lett (2004) 0.85

Helicobacter pylori VacA cytotoxin interacts with fibronectin and alters HeLa cell adhesion and cytoskeletal organization in vitro. FEMS Immunol Med Microbiol (2005) 0.84

RACK1 binds to Smad3 to modulate transforming growth factor-beta1-stimulated alpha2(I) collagen transcription in renal tubular epithelial cells. J Biol Chem (2006) 0.84

Helicobacter pylori protein oxidation influences the colonization process. Int J Med Microbiol (2006) 0.84

Heterogeneous nuclear ribonucleoprotein K modulates angiotensinogen gene expression in kidney cells. J Biol Chem (2006) 0.84

Serotonergic candidate genes and puerperal psychosis: an association study. Psychiatr Genet (2007) 0.84

SYNGR1 is associated with schizophrenia and bipolar disorder in southern India. J Hum Genet (2005) 0.83

The distribution of human endogenous retrovirus K-113 in health and autoimmune diseases in Poland. Rheumatology (Oxford) (2011) 0.83

Association of DRD2 gene variant with schizophrenia. Neurosci Lett (2005) 0.83

Corpus callosal area differences and gender dimorphism in neuroleptic-naïve, recent-onset schizophrenia and healthy control subjects. Schizophr Res (2008) 0.83

A proposal for MRI-based parcellation of the frontal pole. Brain Struct Funct (2007) 0.83

Phylogenetic analysis and selection pressures of 5-HT receptors in human and non-human primates: receptor of an ancient neurotransmitter. J Biomol Struct Dyn (2010) 0.82

Up-regulation of human PNPase mRNA by beta-interferon has no effect on protein level in melanoma cell lines. Acta Biochim Pol (2006) 0.82

Homoplasmic MELAS A3243G mtDNA mutation in a colon cancer sample. Mitochondrion (2003) 0.82

Mitochondrial-related proteomic changes during obesity and fasting in mice are greater in the liver than skeletal muscles. Funct Integr Genomics (2013) 0.82

Casein kinases phosphorylate multiple residues spanning the entire hnRNP K length. Biochim Biophys Acta (2006) 0.81

Increased mitochondrial gene expression during L6 cell myogenesis is accelerated by insulin. Int J Biochem Cell Biol (2005) 0.81