Published in J Biol Chem on July 15, 2013
hnRNP K coordinates transcriptional silencing by SETDB1 in embryonic stem cells. PLoS Genet (2015) 1.49
RNA splicing factors as oncoproteins and tumour suppressors. Nat Rev Cancer (2016) 0.92
hnRNP K Is a Haploinsufficient Tumor Suppressor that Regulates Proliferation and Differentiation Programs in Hematologic Malignancies. Cancer Cell (2015) 0.85
P-TEFb regulation of transcription termination factor Xrn2 revealed by a chemical genetic screen for Cdk9 substrates. Genes Dev (2016) 0.84
Heterogeneous Ribonucleoprotein K (hnRNP K) Binds miR-122, a Mature Liver-Specific MicroRNA Required for Hepatitis C Virus Replication. Mol Cell Proteomics (2015) 0.77
Beads-free protein immunoprecipitation for a mass spectrometry-based interactome and posttranslational modifications analysis. Proteome Sci (2015) 0.76
Genome-wide co-localization of active EGFR and downstream ERK pathway kinases mirrors mitogen-inducible RNA polymerase 2 genomic occupancy. Nucleic Acids Res (2016) 0.75
Analysis of relative gene expression data using real-time quantitative PCR and the 2(-Delta Delta C(T)) Method. Methods (2001) 414.27
Ultrafast and memory-efficient alignment of short DNA sequences to the human genome. Genome Biol (2009) 235.12
Systematic and integrative analysis of large gene lists using DAVID bioinformatics resources. Nat Protoc (2009) 137.99
Genome-wide mapping of in vivo protein-DNA interactions. Science (2007) 64.92
Model-based analysis of ChIP-Seq (MACS). Genome Biol (2008) 51.63
MEME SUITE: tools for motif discovery and searching. Nucleic Acids Res (2009) 23.27
The STRING database in 2011: functional interaction networks of proteins, globally integrated and scored. Nucleic Acids Res (2010) 18.73
A user's guide to the encyclopedia of DNA elements (ENCODE). PLoS Biol (2011) 16.53
A map of the interactome network of the metazoan C. elegans. Science (2004) 15.60
Protocol for the fast chromatin immunoprecipitation (ChIP) method. Nat Protoc (2006) 6.24
Assigning significance to peptides identified by tandem mass spectrometry using decoy databases. J Proteome Res (2007) 5.57
ENCODE whole-genome data in the UCSC Genome Browser: update 2012. Nucleic Acids Res (2011) 4.00
Q-Gene: processing quantitative real-time RT-PCR data. Bioinformatics (2003) 3.71
Human 5' --> 3' exonuclease Xrn2 promotes transcription termination at co-transcriptional cleavage sites. Nature (2004) 3.52
RNA polymerase II pauses and associates with pre-mRNA processing factors at both ends of genes. Nat Struct Mol Biol (2007) 3.36
"Cotranscriptionality": the transcription elongation complex as a nexus for nuclear transactions. Mol Cell (2009) 3.28
hnRNP K: an HDM2 target and transcriptional coactivator of p53 in response to DNA damage. Cell (2005) 3.18
hnRNP K: one protein multiple processes. Bioessays (2004) 2.96
Transcription termination by nuclear RNA polymerases. Genes Dev (2009) 2.65
mRNA decapping factors and the exonuclease Xrn2 function in widespread premature termination of RNA polymerase II transcription. Mol Cell (2012) 2.57
The multifunctional protein p54nrb/PSF recruits the exonuclease XRN2 to facilitate pre-mRNA 3' processing and transcription termination. Genes Dev (2007) 2.49
Heterogeneous nuclear ribonucleoprotein K is a transcription factor. Mol Cell Biol (1996) 2.43
Unravelling the means to an end: RNA polymerase II transcription termination. Nat Rev Mol Cell Biol (2011) 2.21
Specific binding of heterogeneous ribonucleoprotein particle protein K to the human c-myc promoter, in vitro. J Biol Chem (1993) 2.04
Crystal structure of a human cleavage factor CFI(m)25/CFI(m)68/RNA complex provides an insight into poly(A) site recognition and RNA looping. Structure (2011) 1.82
Alternative 3'-end processing of long noncoding RNA initiates construction of nuclear paraspeckles. EMBO J (2012) 1.60
hnRNP K binds a core polypyrimidine element in the eukaryotic translation initiation factor 4E (eIF4E) promoter, and its regulation of eIF4E contributes to neoplastic transformation. Mol Cell Biol (2005) 1.50
The K protein domain that recruits the interleukin 1-responsive K protein kinase lies adjacent to a cluster of c-Src and Vav SH3-binding sites. Implications that K protein acts as a docking platform. J Biol Chem (1995) 1.34
The yeast 5'-3' exonuclease Rat1p functions during transcription elongation by RNA polymerase II. Mol Cell (2010) 1.31
Pre-mRNA 3'-end processing complex assembly and function. Wiley Interdiscip Rev RNA (2010) 1.30
Microplate-based chromatin immunoprecipitation method, Matrix ChIP: a platform to study signaling of complex genomic events. Nucleic Acids Res (2008) 1.27
Knock-down of 25 kDa subunit of cleavage factor Im in Hela cells alters alternative polyadenylation within 3'-UTRs. Nucleic Acids Res (2006) 1.26
Identification of the SRC pyrimidine-binding protein (SPy) as hnRNP K: implications in the regulation of SRC1A transcription. Nucleic Acids Res (2003) 1.26
Co-transcriptional degradation of aberrant pre-mRNA by Xrn2. EMBO J (2012) 1.23
Differential effects of heterogeneous nuclear ribonucleoprotein K on Sp1- and Sp3-mediated transcriptional activation of a neuronal nicotinic acetylcholine receptor promoter. J Biol Chem (1998) 1.17
Landscape of the hnRNP K protein-protein interactome. Proteomics (2006) 1.12
Heterogeneous nuclear ribonucleoproteins as regulators of gene expression through interactions with the human thymidine kinase promoter. J Cell Biochem (2000) 1.11
Androgen receptor overexpression in prostate cancer linked to Pur alpha loss from a novel repressor complex. Cancer Res (2008) 1.10
Loss of androgen receptor in aging and oxidative stress through Myb protooncoprotein-regulated reciprocal chromatin dynamics of p53 and poly(ADP-ribose) polymerase PARP-1. J Biol Chem (2008) 0.98
hnRNP-K and Pur(alpha) act together to repress the transcriptional activity of the CD43 gene promoter. Blood (2002) 0.97
Heterogeneous nuclear ribonucleoprotein K represses transcription from a cytosine/thymidine-rich element in the osteocalcin promoter. Biochem J (2005) 0.97
Direct recruitment of ERK cascade components to inducible genes is regulated by heterogeneous nuclear ribonucleoprotein (hnRNP) K. J Biol Chem (2011) 0.96
Structural biology of poly(A) site definition. Wiley Interdiscip Rev RNA (2011) 0.94
Derailing the locomotive: transcription termination. J Biol Chem (2007) 0.92
Comprehensive analysis of the palindromic motif TCTCGCGAGA: a regulatory element of the HNRNPK promoter. DNA Res (2010) 0.90
Protocol for the fast chromatin immunoprecipitation (ChIP) method. Nat Protoc (2006) 6.24
hnRNP K: one protein multiple processes. Bioessays (2004) 2.96
Fast chromatin immunoprecipitation assay. Nucleic Acids Res (2006) 2.39
Modeling oncogenic signaling in colon tumors by multidirectional analyses of microarray data directed for maximization of analytical reliability. PLoS One (2010) 2.32
c-Src-mediated phosphorylation of hnRNP K drives translational activation of specifically silenced mRNAs. Mol Cell Biol (2002) 1.98
Members of the poly (rC) binding protein family stimulate the activity of the c-myc internal ribosome entry segment in vitro and in vivo. Oncogene (2003) 1.83
The transcription factor encyclopedia. Genome Biol (2012) 1.28
Microplate-based chromatin immunoprecipitation method, Matrix ChIP: a platform to study signaling of complex genomic events. Nucleic Acids Res (2008) 1.27
Heterogeneous nuclear ribonucleoprotein K protein associates with multiple mitochondrial transcripts within the organelle. J Biol Chem (2001) 1.26
Endotoxin mediates recruitment of RNA polymerase II to target genes in acute renal failure. J Am Soc Nephrol (2008) 1.23
BRG1 increases transcription of proinflammatory genes in renal ischemia. J Am Soc Nephrol (2009) 1.17
Maleate nephrotoxicity: mechanisms of injury and correlates with ischemic/hypoxic tubular cell death. Am J Physiol Renal Physiol (2007) 1.12
Renal ischemia-induced cholesterol loading: transcription factor recruitment and chromatin remodeling along the HMG CoA reductase gene. Am J Pathol (2008) 1.12
Landscape of the hnRNP K protein-protein interactome. Proteomics (2006) 1.12
Transient recruitment of the hnRNP K protein to inducibly transcribed gene loci. Nucleic Acids Res (2003) 1.06
High frequency of BRCA1 founder mutations in Polish women with nonfamilial breast cancer. Fam Cancer (2012) 1.02
Cooperative binding of the hnRNP K three KH domains to mRNA targets. FEBS Lett (2004) 1.01
Yeast hnRNP K-like genes are involved in regulation of the telomeric position effect and telomere length. Mol Cell Biol (2002) 1.01
Pooled sample-based GWAS: a cost-effective alternative for identifying colorectal and prostate cancer risk variants in the Polish population. PLoS One (2012) 1.00
Synergistic activation of the rat laminin gamma1 chain promoter by the gut-enriched Kruppel-like factor (GKLF/KLF4) and Sp1. Nucleic Acids Res (2002) 1.00
Quantitative detection for low levels of Helicobacter pylori infection in experimentally infected mice by real-time PCR. J Microbiol Methods (2003) 0.97
Heterogeneous nuclear ribonucleoprotein K contributes to angiotensin II stimulation of vascular endothelial growth factor mRNA translation. Am J Physiol Renal Physiol (2007) 0.97
Direct recruitment of ERK cascade components to inducible genes is regulated by heterogeneous nuclear ribonucleoprotein (hnRNP) K. J Biol Chem (2011) 0.96
The fold recognition of CP2 transcription factors gives new insights into the function and evolution of tumor suppressor protein p53. Cell Cycle (2008) 0.96
Activation of Wnt/β-catenin signaling increases apoptosis in melanoma cells treated with trail. PLoS One (2013) 0.95
An integrated LC-ESI-MS platform for quantitation of serum peptide ladders. Application for colon carcinoma study. Proteomics Clin Appl (2009) 0.94
Characterization of hnRNP K protein-RNA interactions. J Mol Biol (2004) 0.93
Lack of evidence for association of primary sclerosing cholangitis and primary biliary cirrhosis with risk alleles for Crohn's disease in Polish patients. BMC Med Genet (2008) 0.92
Acyl-CoA synthetase 1 is induced by Gram-negative bacteria and lipopolysaccharide and is required for phospholipid turnover in stimulated macrophages. J Biol Chem (2013) 0.91
Association of tumor necrosis factor and human leukocyte antigen DRB1 alleles with Graves' ophthalmopathy. Hum Immunol (2004) 0.91
Comprehensive analysis of the palindromic motif TCTCGCGAGA: a regulatory element of the HNRNPK promoter. DNA Res (2010) 0.90
Heterogeneous nuclear ribonucleoprotein K enhances insulin-induced expression of mitochondrial UCP2 protein. J Biol Chem (2004) 0.90
Microplate-based platform for combined chromatin and DNA methylation immunoprecipitation assays. BMC Mol Biol (2011) 0.89
Direct recruitment of insulin receptor and ERK signaling cascade to insulin-inducible gene loci. Diabetes (2010) 0.89
Increased expression of ribosomal protein S2 in liver tumors, posthepactomized livers, and proliferating hepatocytes in vitro. Acta Biochim Pol (2002) 0.86
A common cis-element in promoters of protein synthesis and cell cycle genes. Acta Biochim Pol (2007) 0.86
Transcription of laminin gamma1 chain gene in rat mesangial cells: constitutive and inducible RNA polymerase II recruitment and chromatin states. Am J Physiol Renal Physiol (2008) 0.86
The fast chromatin immunoprecipitation method. Methods Mol Biol (2009) 0.86
Functional features of gene expression profiles differentiating gastrointestinal stromal tumours according to KIT mutations and expression. BMC Cancer (2009) 0.86
Free-energy distribution of binary protein-protein binding suggests cross-species interactome differences. Proc Natl Acad Sci U S A (2006) 0.85
The hppA gene of Helicobacter pylori encodes the class C acid phosphatase precursor. FEBS Lett (2002) 0.85
Helicobacter pylori VacA cytotoxin interacts with fibronectin and alters HeLa cell adhesion and cytoskeletal organization in vitro. FEMS Immunol Med Microbiol (2005) 0.84
Heterogeneous nuclear ribonucleoprotein K modulates angiotensinogen gene expression in kidney cells. J Biol Chem (2006) 0.84
Helicobacter pylori protein oxidation influences the colonization process. Int J Med Microbiol (2006) 0.84
Successful treatment of refractory autoimmune thrombocytopenia with rituximab and cyclosporin A in a patient with chronic granulomatous disease. Ann Hematol (2005) 0.84
RACK1 binds to Smad3 to modulate transforming growth factor-beta1-stimulated alpha2(I) collagen transcription in renal tubular epithelial cells. J Biol Chem (2006) 0.84
[Management of hyperthyroidism with radioactive iodine in end-stage renal disease patients undergoing dialysis]. Pol Arch Med Wewn (2004) 0.83
Homoplasmic MELAS A3243G mtDNA mutation in a colon cancer sample. Mitochondrion (2003) 0.82
Acute lymphoblastic leukemia in adult first manifested as severe aplastic anemia--role of molecular analysis in correct diagnosis. Leuk Lymphoma (2002) 0.82
Mitochondrial-related proteomic changes during obesity and fasting in mice are greater in the liver than skeletal muscles. Funct Integr Genomics (2013) 0.82
Up-regulation of human PNPase mRNA by beta-interferon has no effect on protein level in melanoma cell lines. Acta Biochim Pol (2006) 0.82
Efficacy and safety of a new intravenous immunoglobulin 10% formulation (octagam® 10%) in patients with immune thrombocytopenia. Hematology (2010) 0.82
Epigenetic changes in renal genes dysregulated in mouse and rat models of type 1 diabetes. Lab Invest (2013) 0.81
Increased mitochondrial gene expression during L6 cell myogenesis is accelerated by insulin. Int J Biochem Cell Biol (2005) 0.81
Pre-analytical-related variability influencing serum peptide profiles demonstrated in a mass spectrometry-based search for colorectal and prostate cancer biomarkers. Acta Biochim Pol (2013) 0.81
Impact of screening kindreds for SDHD p.Cys11X as a common mutation associated with paraganglioma syndrome type 1. J Clin Endocrinol Metab (2008) 0.81
Common low-penetrance risk variants associated with breast cancer in Polish women. BMC Cancer (2013) 0.81
Large intra- and inter-individual variability of genes expression levels limits potential predictive value of molecular diagnosis of dysplasia in Barrett's esophagus. J Mol Med (Berl) (2007) 0.81
Casein kinases phosphorylate multiple residues spanning the entire hnRNP K length. Biochim Biophys Acta (2006) 0.81
Adipokines and genetic factors in overweight or obese but metabolically healthy Polish women. Neuro Endocrinol Lett (2010) 0.81
Association between gynecomastia and aromatase (CYP19) polymorphisms. Eur J Endocrinol (2008) 0.81
bcn-1 Element-dependent activation of the laminin gamma 1 chain gene by the cooperative action of transcription factor E3 (TFE3) and Smad proteins. J Biol Chem (2002) 0.81
The diverse involvement of heterogeneous nuclear ribonucleoprotein K in mitochondrial response to insulin. FEBS Lett (2006) 0.80
Tip-alpha (hp0596 gene product) is a highly immunogenic Helicobacter pylori protein involved in colonization of mouse gastric mucosa. Curr Microbiol (2008) 0.80
High activity of rituximab combined with cladribine and cyclophosphamide in a patient with pulmonary lymphomatoid granulomatosis and bone marrow involvement. Leuk Lymphoma (2006) 0.79
Gene expression alterations induced by low molecular weight heparin during bowel anastomosis healing in rats. Acta Biochim Pol (2011) 0.79
Estimation of groin recurrence risk in patients with squamous cell vulvar carcinoma by the assessment of marker gene expression in the lymph nodes. BMC Cancer (2012) 0.79
Barrett's esophagus associates with a variant of IL23R gene. Acta Biochim Pol (2008) 0.79
Plasma levels of angiogenic factors and circulating endothelial cells in essential thrombocythemia: correlation with cytoreductive therapy and JAK2-V617F mutational status. Leuk Lymphoma (2010) 0.79
High ambient glucose augments angiotensin II-induced proinflammatory gene mRNA expression in human mesangial cells: effects of valsartan and simvastatin. Am J Nephrol (2009) 0.79
Identification of a late onset Alzheimer's disease candidate risk variant at 9q21.33 in Polish patients. J Alzheimers Dis (2012) 0.79
jChIP: a graphical environment for exploratory ChIP-Seq data analysis. BMC Res Notes (2014) 0.79
The binding activity of yeast RNAs to yeast Hek2p and mammalian hnRNP K proteins, determined using the three-hybrid system. Cell Mol Biol Lett (2005) 0.79
Growth and development alter susceptibility to acute renal injury. Kidney Int (2008) 0.79
Poly(ADP-ribose) polymerase-1 (PARP-1) contributes to the barrier function of a vertebrate chromatin insulator. J Biol Chem (2010) 0.79
Lack of evidence for increased level of circulating urothelial cells in the peripheral blood after transurethral resection of bladder tumors. Int Urol Nephrol (2011) 0.78
Multivariate analysis of risk factors for development of duodenal ulcer in Helicobacter pylori-infected patients. Digestion (2003) 0.78
microRNAs in uterine sarcomas and mixed epithelial-mesenchymal uterine tumors: a preliminary report. Tumour Biol (2013) 0.78
Expression of genes encoding mitochondrial proteins can distinguish nonalcoholic steatosis from steatohepatitis. Acta Biochim Pol (2007) 0.78
Halogenated imidazole derivatives block RNA polymerase II elongation along mitogen inducible genes. BMC Mol Biol (2010) 0.78
Limited clinical relevance of mitochondrial DNA mutation and gene expression analyses in ovarian cancer. BMC Cancer (2008) 0.77
The influence of low-dose aspirin and hydroxyurea on platelet-leukocyte interactions in patients with essential thrombocythemia. Blood Coagul Fibrinolysis (2009) 0.77
Profiling RNA polymerase II using the fast chromatin immunoprecipitation method. Methods Mol Biol (2011) 0.77
Mitochondria-associated satellite I RNA binds to hnRNP K protein. Acta Biochim Pol (2006) 0.77
Therapeutic properties and safety of recombinant factor VIII and factor IX. Pol Arch Med Wewn (2009) 0.77
Comparative kinome analysis to identify putative colon tumor biomarkers. J Mol Med (Berl) (2011) 0.77
Extracellular matrix and cytochrome P450 gene expression can distinguish steatohepatitis from steatosis in mice. J Cell Mol Med (2014) 0.77
Clustering coefficients of protein-protein interaction networks. Phys Rev E Stat Nonlin Soft Matter Phys (2007) 0.77