Published in Nucleic Acids Res on June 07, 2005
Type I restriction enzymes and their relatives. Nucleic Acids Res (2013) 1.54
The structure of M.EcoKI Type I DNA methyltransferase with a DNA mimic antirestriction protein. Nucleic Acids Res (2008) 1.37
Atomic force microscopy of the EcoKI Type I DNA restriction enzyme bound to DNA shows enzyme dimerization and DNA looping. Nucleic Acids Res (2009) 1.17
Structural model for the multisubunit Type IC restriction-modification DNA methyltransferase M.EcoR124I in complex with DNA. Nucleic Acids Res (2006) 0.97
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Differential stabilization of reaction intermediates: specificity checkpoints for M.EcoRI revealed by transient fluorescence and fluorescence lifetime studies. Nucleic Acids Res (2008) 0.80
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ArdA proteins from different mobile genetic elements can bind to the EcoKI Type I DNA methyltransferase of E. coli K12. Biochim Biophys Acta (2013) 0.79
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p53 C-terminal interaction with DNA ends and gaps has opposing effect on specific DNA binding by the core. Nucleic Acids Res (2000) 0.86
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The Scottish Structural Proteomics Facility: targets, methods and outputs. J Struct Funct Genomics (2010) 1.66
Differential dynamic microscopy: a high-throughput method for characterizing the motility of microorganisms. Biophys J (2012) 1.61
Highlights of the DNA cutters: a short history of the restriction enzymes. Nucleic Acids Res (2013) 1.60
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Type I restriction enzymes and their relatives. Nucleic Acids Res (2013) 1.54
Extensive DNA mimicry by the ArdA anti-restriction protein and its role in the spread of antibiotic resistance. Nucleic Acids Res (2009) 1.38
The structure of M.EcoKI Type I DNA methyltransferase with a DNA mimic antirestriction protein. Nucleic Acids Res (2008) 1.37
Fast-scan atomic force microscopy reveals that the type III restriction enzyme EcoP15I is capable of DNA translocation and looping. Proc Natl Acad Sci U S A (2007) 1.31
DNA looping and translocation provide an optimal cleavage mechanism for the type III restriction enzymes. EMBO J (2007) 1.28
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Type III restriction-modification enzymes: a historical perspective. Nucleic Acids Res (2013) 1.18
Time-resolved fluorescence of 2-aminopurine as a probe of base flipping in M.HhaI-DNA complexes. Nucleic Acids Res (2005) 1.17
Atomic force microscopy of the EcoKI Type I DNA restriction enzyme bound to DNA shows enzyme dimerization and DNA looping. Nucleic Acids Res (2009) 1.17
Structure and operation of the DNA-translocating type I DNA restriction enzymes. Genes Dev (2012) 1.13
High-precision FLIM-FRET in fixed and living cells reveals heterogeneity in a simple CFP-YFP fusion protein. Biophys Chem (2007) 1.08
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Strong physical constraints on sequence-specific target location by proteins on DNA molecules. Nucleic Acids Res (2006) 1.06
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The Orf18 gene product from conjugative transposon Tn916 is an ArdA antirestriction protein that inhibits type I DNA restriction-modification systems. J Mol Biol (2008) 0.96
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A mutational analysis of DNA mimicry by ocr, the gene 0.3 antirestriction protein of bacteriophage T7. Biochem Biophys Res Commun (2008) 0.95
Cluster-driven dynamical arrest in concentrated lysozyme solutions. J Phys Chem B (2011) 0.93
Quantitative imaging of colloidal flows. Adv Colloid Interface Sci (2008) 0.93
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A conserved tyrosine residue aids ternary complex formation, but not catalysis, in phage T5 flap endonuclease. J Mol Biol (2002) 0.91
Single-molecule imaging of Bacteroides fragilis AddAB reveals the highly processive translocation of a single motor helicase. Nucleic Acids Res (2010) 0.90
The kinetics of YOYO-1 intercalation into single molecules of double-stranded DNA. Biochem Biophys Res Commun (2010) 0.89
Migration of chemotactic bacteria in soft agar: role of gel concentration. Biophys J (2011) 0.88
Mechanosensitive channels and bacterial cell wall integrity: does life end with a bang or a whimper? J R Soc Interface (2013) 0.88
Impact of target site distribution for Type I restriction enzymes on the evolution of methicillin-resistant Staphylococcus aureus (MRSA) populations. Nucleic Acids Res (2013) 0.88
Differential dynamic microscopy for anisotropic colloidal dynamics. Langmuir (2012) 0.87
Unusual structures are present in DNA fragments containing super-long Huntingtin CAG repeats. PLoS One (2011) 0.87
Shear zones and wall slip in the capillary flow of concentrated colloidal suspensions. Phys Rev Lett (2007) 0.86
The structure of the KlcA and ArdB proteins reveals a novel fold and antirestriction activity against Type I DNA restriction systems in vivo but not in vitro. Nucleic Acids Res (2009) 0.86
Emulsification of partially miscible liquids using colloidal particles: nonspherical and extended domain structures. Langmuir (2007) 0.85
A unique homologue of the eukaryotic protein-modifier ubiquitin present in the bacterium Bacteroides fragilis, a predominant resident of the human gastrointestinal tract. Microbiology (2011) 0.85
Colloidal glasses and gels: The interplay of bonding and caging. Proc Natl Acad Sci U S A (2009) 0.85
Aggregation by depletion attraction in cultures of bacteria producing exopolysaccharide. J R Soc Interface (2012) 0.85
Avalanches mediate crystallization in a hard-sphere glass. Proc Natl Acad Sci U S A (2013) 0.85
Exploring the DNA mimicry of the Ocr protein of phage T7. Nucleic Acids Res (2012) 0.85
Dissection of the DNA mimicry of the bacteriophage T7 Ocr protein using chemical modification. J Mol Biol (2009) 0.84
Dimensions of plectonemically supercoiled DNA. Biophys J (2002) 0.84
Use of time-resolved FRET to validate crystal structure of complement regulatory complex between C3b and factor H (N terminus). Protein Sci (2011) 0.84
An investigation of the structural requirements for ATP hydrolysis and DNA cleavage by the EcoKI Type I DNA restriction and modification enzyme. Nucleic Acids Res (2011) 0.83
Optical tweezer micromanipulation of filamentous fungi. Fungal Genet Biol (2006) 0.83
Controlling protein retention on enzyme-responsive surfaces. Surf Interface Anal (2006) 0.82
Assembly of EcoKI DNA methyltransferase requires the C-terminal region of the HsdM modification subunit. Biophys Chem (2003) 0.82
Reeling in the bases. Nat Struct Mol Biol (2004) 0.81
Overexpression of the single-stranded DNA-binding protein (SSB) stabilises CAG*CTG triplet repeats in an orientation dependent manner. FEBS Lett (2010) 0.81
Differential stabilization of reaction intermediates: specificity checkpoints for M.EcoRI revealed by transient fluorescence and fluorescence lifetime studies. Nucleic Acids Res (2008) 0.80
Dynamics of individual colloidal particles in one-dimensional random potentials: a simulation study. J Phys Condens Matter (2012) 0.80
Particle dynamics in two-dimensional random-energy landscapes: experiments and simulations. Phys Rev E Stat Nonlin Soft Matter Phys (2013) 0.80
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Effect of crowding on the conformation of interwound DNA strands from neutron scattering measurements and Monte Carlo simulations. Phys Rev E Stat Nonlin Soft Matter Phys (2010) 0.80
A small molecule that walks non-directionally along a track without external intervention. Angew Chem Int Ed Engl (2012) 0.79
Fusion of GFP to the M.EcoKI DNA methyltransferase produces a new probe of Type I DNA restriction and modification enzymes. Biochem Biophys Res Commun (2010) 0.79
On polydispersity and the hard sphere glass transition. Soft Matter (2015) 0.79
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Removal of a frameshift between the hsdM and hsdS genes of the EcoKI Type IA DNA restriction and modification system produces a new type of system and links the different families of Type I systems. Nucleic Acids Res (2012) 0.78
Simple model for the growth behaviour of mixed lecithin-bile salt micelles. Phys Chem Chem Phys (2010) 0.77
Formation of self-supporting reversible cellular networks in suspensions of colloids and liquid crystals. Langmuir (2005) 0.77
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Enhanced diffusion of nonswimmers in a three-dimensional bath of motile bacteria. Phys Rev E Stat Nonlin Soft Matter Phys (2013) 0.77
Tuning colloidal gels by shear. Soft Matter (2015) 0.77
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Enzyme-promoted base flipping controls DNA methylation fidelity. Biochemistry (2013) 0.76
Restriction endonuclease TseI cleaves A:A and T:T mismatches in CAG and CTG repeats. Nucleic Acids Res (2013) 0.75
Glasses under high pressure: a link to colloidal science? J Phys Condens Matter (2006) 0.75
Tuning protein-protein interactions using cosolvents: specific effects of ionic and non-ionic additives on protein phase behavior. Phys Chem Chem Phys (2016) 0.75
Kinks in experimental diffusion profiles of a dissolving semi-crystalline polymer explained by a concentration-dependent diffusion coefficient. Phys Chem Chem Phys (2015) 0.75
Colloids, grains and dense suspensions: under flow and under arrest. Philos Trans A Math Phys Eng Sci (2009) 0.75
Time- and ensemble-averages in evolving systems: the case of Brownian particles in random potentials. Phys Chem Chem Phys (2016) 0.75
DNA electrophoresis: historical and theoretical perspectives. Methods Mol Biol (2013) 0.75
Celebrating Soft Matter's 10th Anniversary: Simplicity in complexity - towards a soft matter physics of caramel. Soft Matter (2016) 0.75
Using the fluorescence decay of 2-aminopurine to investigate conformational change in the recognition sequence of the EcoRV DNA-(adenine-N6)-methyltransferase on enzyme binding. Biophys Chem (2011) 0.75
Three-dimensional structure and growth of myelins. Langmuir (2010) 0.75