Published in Dev Cell on July 01, 2005
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Genome-wide analysis of the RNA-DEPENDENT RNA POLYMERASE6/DICER-LIKE4 pathway in Arabidopsis reveals dependency on miRNA- and tasiRNA-directed targeting. Plant Cell (2007) 3.40
Cell surface- and rho GTPase-based auxin signaling controls cellular interdigitation in Arabidopsis. Cell (2010) 3.33
Recent advances and emerging trends in plant hormone signalling. Nature (2009) 3.32
ARF7 and ARF19 regulate lateral root formation via direct activation of LBD/ASL genes in Arabidopsis. Plant Cell (2007) 3.28
Auxin biosynthesis and its role in plant development. Annu Rev Plant Biol (2010) 3.21
F-box proteins in rice. Genome-wide analysis, classification, temporal and spatial gene expression during panicle and seed development, and regulation by light and abiotic stress. Plant Physiol (2007) 3.18
Auxin synthesized by the YUCCA flavin monooxygenases is essential for embryogenesis and leaf formation in Arabidopsis. Plant Cell (2007) 3.00
A novel sensor to map auxin response and distribution at high spatio-temporal resolution. Nature (2012) 2.86
Ubiquitin, hormones and biotic stress in plants. Ann Bot (2007) 2.77
The auxin signalling network translates dynamic input into robust patterning at the shoot apex. Mol Syst Biol (2011) 2.74
ABP1 mediates auxin inhibition of clathrin-dependent endocytosis in Arabidopsis. Cell (2010) 2.51
Complex regulation of the TIR1/AFB family of auxin receptors. Proc Natl Acad Sci U S A (2009) 2.36
The Arabidopsis Aux/IAA protein family has diversified in degradation and auxin responsiveness. Plant Cell (2006) 2.31
Functional genomic analysis of the AUXIN/INDOLE-3-ACETIC ACID gene family members in Arabidopsis thaliana. Plant Cell (2005) 2.27
Cell cycle progression in the pericycle is not sufficient for SOLITARY ROOT/IAA14-mediated lateral root initiation in Arabidopsis thaliana. Plant Cell (2005) 2.23
A combinatorial TIR1/AFB-Aux/IAA co-receptor system for differential sensing of auxin. Nat Chem Biol (2012) 2.18
Phosphate availability alters lateral root development in Arabidopsis by modulating auxin sensitivity via a mechanism involving the TIR1 auxin receptor. Plant Cell (2008) 2.08
Nitrate-responsive miR393/AFB3 regulatory module controls root system architecture in Arabidopsis thaliana. Proc Natl Acad Sci U S A (2010) 2.03
Strigolactone acts downstream of auxin to regulate bud outgrowth in pea and Arabidopsis. Plant Physiol (2009) 2.02
MONOPTEROS controls embryonic root initiation by regulating a mobile transcription factor. Nature (2010) 2.02
Structure and expression analysis of early auxin-responsive Aux/IAA gene family in rice (Oryza sativa). Funct Integr Genomics (2005) 2.01
Arabidopsis Argonaute 2 regulates innate immunity via miRNA393(∗)-mediated silencing of a Golgi-localized SNARE gene, MEMB12. Mol Cell (2011) 2.01
Jasmonate signaling: a conserved mechanism of hormone sensing. Curr Opin Plant Biol (2008) 2.00
Auxin regulates Arabidopsis anther dehiscence, pollen maturation, and filament elongation. Plant Cell (2008) 1.92
Interactions between auxin and strigolactone in shoot branching control. Plant Physiol (2009) 1.85
Adaptive evolution in two large families of ubiquitin-ligase adapters in nematodes and plants. Genome Res (2006) 1.84
Survival of the flexible: hormonal growth control and adaptation in plant development. Nat Rev Genet (2009) 1.81
The Arabidopsis EIN3 binding F-Box proteins EBF1 and EBF2 have distinct but overlapping roles in ethylene signaling. Plant Cell (2007) 1.79
MicroRNAs prevent precocious gene expression and enable pattern formation during plant embryogenesis. Genes Dev (2010) 1.79
Inhibition of cell expansion by rapid ABP1-mediated auxin effect on microtubules. Nature (2014) 1.77
Comprehensive transcriptome analysis of phytohormone biosynthesis and signaling genes in microspore/pollen and tapetum of rice. Plant Cell Physiol (2008) 1.77
Control of leaf and vein development by auxin. Cold Spring Harb Perspect Biol (2010) 1.70
Evolution of F-box genes in plants: different modes of sequence divergence and their relationships with functional diversification. Proc Natl Acad Sci U S A (2009) 1.70
Small-molecule agonists and antagonists of F-box protein-substrate interactions in auxin perception and signaling. Proc Natl Acad Sci U S A (2008) 1.67
Transcriptional regulation of gibberellin metabolism genes by auxin signaling in Arabidopsis. Plant Physiol (2006) 1.66
Conditional repression of AUXIN BINDING PROTEIN1 reveals that it coordinates cell division and cell expansion during postembryonic shoot development in Arabidopsis and tobacco. Plant Cell (2008) 1.66
The ubiquitin-proteasome system regulates plant hormone signaling. Plant J (2010) 1.63
Auxin-cytokinin interaction regulates meristem development. Mol Plant (2011) 1.62
Auxin-Mediated Transcriptional System with a Minimal Set of Components Is Critical for Morphogenesis through the Life Cycle in Marchantia polymorpha. PLoS Genet (2015) 1.62
Auxin activates the plasma membrane H+-ATPase by phosphorylation during hypocotyl elongation in Arabidopsis. Plant Physiol (2012) 1.60
A Developmental Framework for Graft Formation and Vascular Reconnection in Arabidopsis thaliana. Curr Biol (2015) 1.56
The evolving complexity of the auxin pathway. Plant Cell (2008) 1.55
Mutations in an auxin receptor homolog AFB5 and in SGT1b confer resistance to synthetic picolinate auxins and not to 2,4-dichlorophenoxyacetic acid or indole-3-acetic acid in Arabidopsis. Plant Physiol (2006) 1.54
NPY genes and AGC kinases define two key steps in auxin-mediated organogenesis in Arabidopsis. Proc Natl Acad Sci U S A (2008) 1.52
A synthetic approach reveals extensive tunability of auxin signaling. Plant Physiol (2012) 1.50
Auxin controls seed dormancy through stimulation of abscisic acid signaling by inducing ARF-mediated ABI3 activation in Arabidopsis. Proc Natl Acad Sci U S A (2013) 1.50
Auxin signaling. Curr Opin Plant Biol (2006) 1.49
F-box proteins FKF1 and LKP2 act in concert with ZEITLUPE to control Arabidopsis clock progression. Plant Cell (2010) 1.48
Auxin control of embryo patterning. Cold Spring Harb Perspect Biol (2009) 1.47
Retracted CLASP-mediated cortical microtubule organization guides PIN polarization axis. Nature (2013) 1.44
Auxin influx carriers control vascular patterning and xylem differentiation in Arabidopsis thaliana. PLoS Genet (2015) 1.44
Abscisic acid increases Arabidopsis ABI5 transcription factor levels by promoting KEG E3 ligase self-ubiquitination and proteasomal degradation. Plant Cell (2010) 1.44
Involvement of auxin and brassinosteroid in the regulation of petiole elongation under the shade. Plant Physiol (2010) 1.39
LBD18/ASL20 regulates lateral root formation in combination with LBD16/ASL18 downstream of ARF7 and ARF19 in Arabidopsis. Plant Physiol (2009) 1.39
Auxin at the shoot apical meristem. Cold Spring Harb Perspect Biol (2010) 1.38
Auxin biosynthesis: a simple two-step pathway converts tryptophan to indole-3-acetic acid in plants. Mol Plant (2011) 1.37
Large-scale, lineage-specific expansion of a bric-a-brac/tramtrack/broad complex ubiquitin-ligase gene family in rice. Plant Cell (2007) 1.36
Retracted The AFB4 auxin receptor is a negative regulator of auxin signaling in seedlings. Curr Biol (2011) 1.36
Nitric oxide influences auxin signaling through S-nitrosylation of the Arabidopsis TRANSPORT INHIBITOR RESPONSE 1 auxin receptor. Plant J (2012) 1.35
Brassinosteroids control male fertility by regulating the expression of key genes involved in Arabidopsis anther and pollen development. Proc Natl Acad Sci U S A (2010) 1.35
SCFTIR1/AFB-based auxin perception: mechanism and role in plant growth and development. Plant Cell (2015) 1.35
miR393 and secondary siRNAs regulate expression of the TIR1/AFB2 auxin receptor clade and auxin-related development of Arabidopsis leaves. Plant Physiol (2011) 1.34
Differential auxin-transporting activities of PIN-FORMED proteins in Arabidopsis root hair cells. Plant Physiol (2010) 1.33
Systems analysis of shoot apical meristem growth and development: integrating hormonal and mechanical signaling. Plant Cell (2012) 1.31
The ectomycorrhizal fungus Laccaria bicolor stimulates lateral root formation in poplar and Arabidopsis through auxin transport and signaling. Plant Physiol (2009) 1.30
Mechanical stimuli modulate lateral root organogenesis. Plant Physiol (2009) 1.28
Auxin perception--structural insights. Cold Spring Harb Perspect Biol (2010) 1.27
Sl-IAA3, a tomato Aux/IAA at the crossroads of auxin and ethylene signalling involved in differential growth. J Exp Bot (2009) 1.27
A gain-of-function mutation in the Arabidopsis pleiotropic drug resistance transporter PDR9 confers resistance to auxinic herbicides. Plant Physiol (2006) 1.24
Why so repressed? Turning off transcription during plant growth and development. Curr Opin Plant Biol (2009) 1.19
Recapitulation of the forward nuclear auxin response pathway in yeast. Proc Natl Acad Sci U S A (2014) 1.17
OsTIR1 and OsAFB2 downregulation via OsmiR393 overexpression leads to more tillers, early flowering and less tolerance to salt and drought in rice. PLoS One (2012) 1.17
Diversity and specificity: auxin perception and signaling through the TIR1/AFB pathway. Curr Opin Plant Biol (2014) 1.16
Hypocotyl transcriptome reveals auxin regulation of growth-promoting genes through GA-dependent and -independent pathways. PLoS One (2012) 1.15
The F-box protein ACRE189/ACIF1 regulates cell death and defense responses activated during pathogen recognition in tobacco and tomato. Plant Cell (2008) 1.15
Auxin efflux by PIN-FORMED proteins is activated by two different protein kinases, D6 PROTEIN KINASE and PINOID. Elife (2014) 1.15
The tryptophan conjugates of jasmonic and indole-3-acetic acids are endogenous auxin inhibitors. Plant Physiol (2009) 1.15
When stress and development go hand in hand: main hormonal controls of adventitious rooting in cuttings. Front Plant Sci (2013) 1.13
Auxin reflux between the endodermis and pericycle promotes lateral root initiation. EMBO J (2012) 1.12
The lateral root initiation index: an integrative measure of primordium formation. Ann Bot (2009) 1.12
Apoplastic reactive oxygen species transiently decrease auxin signaling and cause stress-induced morphogenic response in Arabidopsis. Plant Physiol (2011) 1.11
Multiple AUX/IAA-ARF modules regulate lateral root formation: the role of Arabidopsis SHY2/IAA3-mediated auxin signalling. Philos Trans R Soc Lond B Biol Sci (2012) 1.10
Spatiotemporal regulation of lateral root organogenesis in Arabidopsis by cytokinin. Plant Cell (2012) 1.09
The IBR5 phosphatase promotes Arabidopsis auxin responses through a novel mechanism distinct from TIR1-mediated repressor degradation. BMC Plant Biol (2008) 1.09
The Arabidopsis cell cycle F-box protein SKP2A binds to auxin. Plant Cell (2010) 1.09
Systems approaches map regulatory networks downstream of the auxin receptor AFB3 in the nitrate response of Arabidopsis thaliana roots. Proc Natl Acad Sci U S A (2013) 1.08
Transkingdom signaling based on bacterial cyclodipeptides with auxin activity in plants. Proc Natl Acad Sci U S A (2011) 1.08
Auxin dynamics: the dazzling complexity of a small molecule's message. Planta (2008) 1.07
The GCR2 gene family is not required for ABA control of seed germination and early seedling development in Arabidopsis. PLoS One (2008) 1.07
Is ABP1 an auxin receptor yet? Mol Plant (2011) 1.06
A kinetic analysis of the auxin transcriptome reveals cell wall remodeling proteins that modulate lateral root development in Arabidopsis. Plant Cell (2013) 1.03
SCF(TIR1/AFB)-auxin signalling regulates PIN vacuolar trafficking and auxin fluxes during root gravitropism. EMBO J (2012) 1.03
Constitutive repression and activation of auxin signaling in Arabidopsis. Plant Physiol (2009) 1.03
A gain-of-function mutation in IAA18 alters Arabidopsis embryonic apical patterning. Development (2009) 1.03
Molecular genetic analysis of phototropism in Arabidopsis. Plant Cell Physiol (2012) 1.03
Auxin immunolocalization implicates vesicular neurotransmitter-like mode of polar auxin transport in root apices. Plant Signal Behav (2006) 1.03
AUXIN BINDING PROTEIN1 links cell wall remodeling, auxin signaling, and cell expansion in arabidopsis. Plant Cell (2014) 1.03
Arabidopsis ROOT UVB SENSITIVE2/WEAK AUXIN RESPONSE1 is required for polar auxin transport. Plant Cell (2010) 1.02
Local, efflux-dependent auxin gradients as a common module for plant organ formation. Cell (2003) 11.53
The F-box protein TIR1 is an auxin receptor. Nature (2005) 9.45
Efflux-dependent auxin gradients establish the apical-basal axis of Arabidopsis. Nature (2003) 8.75
Mechanism of auxin perception by the TIR1 ubiquitin ligase. Nature (2007) 8.21
The Physcomitrella genome reveals evolutionary insights into the conquest of land by plants. Science (2007) 8.12
A plant miRNA contributes to antibacterial resistance by repressing auxin signaling. Science (2006) 7.74
The Arabidopsis GNOM ARF-GEF mediates endosomal recycling, auxin transport, and auxin-dependent plant growth. Cell (2003) 6.95
TAA1-mediated auxin biosynthesis is essential for hormone crosstalk and plant development. Cell (2008) 5.26
A PINOID-dependent binary switch in apical-basal PIN polar targeting directs auxin efflux. Science (2004) 4.77
Auxin inhibits endocytosis and promotes its own efflux from cells. Nature (2005) 4.69
AtPIN4 mediates sink-driven auxin gradients and root patterning in Arabidopsis. Cell (2002) 4.56
EIN3-dependent regulation of plant ethylene hormone signaling by two arabidopsis F box proteins: EBF1 and EBF2. Cell (2003) 4.09
Antagonistic regulation of PIN phosphorylation by PP2A and PINOID directs auxin flux. Cell (2007) 3.84
The SCF(COI1) ubiquitin-ligase complexes are required for jasmonate response in Arabidopsis. Plant Cell (2002) 3.34
Recent advances and emerging trends in plant hormone signalling. Nature (2009) 3.32
Auxin receptors and plant development: a new signaling paradigm. Annu Rev Cell Dev Biol (2008) 3.21
Mechanism of auxin-regulated gene expression in plants. Annu Rev Genet (2009) 3.11
The Selaginella genome identifies genetic changes associated with the evolution of vascular plants. Science (2011) 3.10
Sites and regulation of auxin biosynthesis in Arabidopsis roots. Plant Cell (2005) 2.94
The Arabidopsis BODENLOS gene encodes an auxin response protein inhibiting MONOPTEROS-mediated embryo patterning. Genes Dev (2002) 2.90
Different anti-HCV profiles of statins and their potential for combination therapy with interferon. Hepatology (2006) 2.87
A novel aux/IAA28 signaling cascade activates GATA23-dependent specification of lateral root founder cell identity. Curr Biol (2010) 2.81
The auxin signalling network translates dynamic input into robust patterning at the shoot apex. Mol Syst Biol (2011) 2.74
The ubiquitin-proteasome pathway and plant development. Plant Cell (2004) 2.72
Plant development: regulation by protein degradation. Science (2002) 2.64
Co-option of a default secretory pathway for plant immune responses. Nature (2008) 2.48
Developmental specificity of auxin response by pairs of ARF and Aux/IAA transcriptional regulators. EMBO J (2005) 2.35
Development of an optimized backbone of FRET biosensors for kinases and GTPases. Mol Biol Cell (2011) 2.28
Cytokinins act directly on lateral root founder cells to inhibit root initiation. Plant Cell (2007) 2.23
A combinatorial TIR1/AFB-Aux/IAA co-receptor system for differential sensing of auxin. Nat Chem Biol (2012) 2.18
Auxin signaling and regulated protein degradation. Trends Plant Sci (2004) 2.15
Endocytic and secretory traffic in Arabidopsis merge in the trans-Golgi network/early endosome, an independent and highly dynamic organelle. Plant Cell (2010) 2.14
AXR1-ECR1-dependent conjugation of RUB1 to the Arabidopsis Cullin AtCUL1 is required for auxin response. Plant Cell (2002) 2.09
A mutually inhibitory interaction between auxin and cytokinin specifies vascular pattern in roots. Curr Biol (2011) 2.08
Phosphate availability alters lateral root development in Arabidopsis by modulating auxin sensitivity via a mechanism involving the TIR1 auxin receptor. Plant Cell (2008) 2.08
Receptor-like kinase ACR4 restricts formative cell divisions in the Arabidopsis root. Science (2008) 2.06
Auxin triggers transient local signaling for cell specification in Arabidopsis embryogenesis. Dev Cell (2006) 2.03
MONOPTEROS controls embryonic root initiation by regulating a mobile transcription factor. Nature (2010) 2.02
Arabidopsis haiku mutants reveal new controls of seed size by endosperm. Plant Physiol (2003) 2.01
miR390, Arabidopsis TAS3 tasiRNAs, and their AUXIN RESPONSE FACTOR targets define an autoregulatory network quantitatively regulating lateral root growth. Plant Cell (2010) 1.96
Receptor-like kinases shape the plant. Nat Cell Biol (2009) 1.96
Auxin action in a cell-free system. Curr Biol (2003) 1.93
Plant hormones are versatile chemical regulators of plant growth. Nat Chem Biol (2009) 1.89
Protein interaction analysis of SCF ubiquitin E3 ligase subunits from Arabidopsis. Plant J (2003) 1.89
Stem cells that make stems. Nature (2002) 1.87
F-box-like domain in the polerovirus protein P0 is required for silencing suppressor function. Proc Natl Acad Sci U S A (2006) 1.86
Partial loss-of-function alleles reveal a role for GNOM in auxin transport-related, post-embryonic development of Arabidopsis. Development (2003) 1.84
Ligand-binding specificities of laminin-binding integrins: a comprehensive survey of laminin-integrin interactions using recombinant alpha3beta1, alpha6beta1, alpha7beta1 and alpha6beta4 integrins. Matrix Biol (2006) 1.82
Survival of the flexible: hormonal growth control and adaptation in plant development. Nat Rev Genet (2009) 1.81
Functional diversification of closely related ARF-GEFs in protein secretion and recycling. Nature (2007) 1.81
Null mutation of AtCUL1 causes arrest in early embryogenesis in Arabidopsis. Mol Biol Cell (2002) 1.78
Bimodular auxin response controls organogenesis in Arabidopsis. Proc Natl Acad Sci U S A (2010) 1.78
The TRANSPORT INHIBITOR RESPONSE2 gene is required for auxin synthesis and diverse aspects of plant development. Plant Physiol (2009) 1.70
Laminin E8 fragments support efficient adhesion and expansion of dissociated human pluripotent stem cells. Nat Commun (2012) 1.70
The WUSCHEL and SHOOTMERISTEMLESS genes fulfil complementary roles in Arabidopsis shoot meristem regulation. Development (2002) 1.67
The Arabidopsis HINKEL gene encodes a kinesin-related protein involved in cytokinesis and is expressed in a cell cycle-dependent manner. Curr Biol (2002) 1.67
Plant cytokinesis requires de novo secretory trafficking but not endocytosis. Curr Biol (2007) 1.67
Role of the Arabidopsis RING-H2 protein RBX1 in RUB modification and SCF function. Plant Cell (2002) 1.66
The IAA1 protein is encoded by AXR5 and is a substrate of SCF(TIR1). Plant J (2004) 1.63
The ubiquitin-proteasome system regulates plant hormone signaling. Plant J (2010) 1.63
Cyclophilin 40 is required for microRNA activity in Arabidopsis. Proc Natl Acad Sci U S A (2009) 1.56
The role of regulated protein degradation in auxin response. Plant Mol Biol (2002) 1.56
The evolving complexity of the auxin pathway. Plant Cell (2008) 1.55
Processive phosphorylation of ERK MAP kinase in mammalian cells. Proc Natl Acad Sci U S A (2011) 1.55
Auxin receptors: a new role for F-box proteins. Curr Opin Cell Biol (2006) 1.55
Cullins 3a and 3b assemble with members of the broad complex/tramtrack/bric-a-brac (BTB) protein family to form essential ubiquitin-protein ligases (E3s) in Arabidopsis. J Biol Chem (2005) 1.52
The Arabidopsis SUPPRESSOR OF AUXIN RESISTANCE proteins are nucleoporins with an important role in hormone signaling and development. Plant Cell (2006) 1.52
The RUB/Nedd8 conjugation pathway is required for early development in Arabidopsis. EMBO J (2003) 1.50
Auxin control of embryo patterning. Cold Spring Harb Perspect Biol (2009) 1.47
Ralstonia solanacearum requires F-box-like domain-containing type III effectors to promote disease on several host plants. Proc Natl Acad Sci U S A (2006) 1.46
Mis-expression of the CLV3/ESR-like gene CLE19 in Arabidopsis leads to a consumption of root meristem. Gene (2004) 1.46
The Arabidopsis PILZ group genes encode tubulin-folding cofactor orthologs required for cell division but not cell growth. Genes Dev (2002) 1.45
Arabidopsis AXR6 encodes CUL1 implicating SCF E3 ligases in auxin regulation of embryogenesis. EMBO J (2003) 1.45
The emerging family of CULLIN3-RING ubiquitin ligases (CRL3s): cellular functions and disease implications. EMBO J (2013) 1.43
Unraveling the evolution of auxin signaling. Plant Physiol (2010) 1.41
Endocytosis restricts Arabidopsis KNOLLE syntaxin to the cell division plane during late cytokinesis. EMBO J (2009) 1.39
LACHESIS restricts gametic cell fate in the female gametophyte of Arabidopsis. PLoS Biol (2007) 1.38
R1R2R3-Myb proteins positively regulate cytokinesis through activation of KNOLLE transcription in Arabidopsis thaliana. Development (2007) 1.36
Retracted The AFB4 auxin receptor is a negative regulator of auxin signaling in seedlings. Curr Biol (2011) 1.36
Nitric oxide influences auxin signaling through S-nitrosylation of the Arabidopsis TRANSPORT INHIBITOR RESPONSE 1 auxin receptor. Plant J (2012) 1.35
Cellularisation in the endosperm of Arabidopsis thaliana is coupled to mitosis and shares multiple components with cytokinesis. Development (2002) 1.34
Different auxin response machineries control distinct cell fates in the early plant embryo. Dev Cell (2012) 1.32