Published in Proc Natl Acad Sci U S A on February 08, 2010
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A genome-wide perspective of miRNAome in response to high temperature, salinity and drought stresses in Brassica juncea (Czern) L. PLoS One (2014) 1.46
Ammonium triggers lateral root branching in Arabidopsis in an AMMONIUM TRANSPORTER1;3-dependent manner. Plant Cell (2010) 1.44
miR393 and secondary siRNAs regulate expression of the TIR1/AFB2 auxin receptor clade and auxin-related development of Arabidopsis leaves. Plant Physiol (2011) 1.34
Identification of nitrogen starvation-responsive microRNAs in Arabidopsis thaliana. PLoS One (2012) 1.18
Genome-wide identification of microRNAs in response to low nitrate availability in maize leaves and roots. PLoS One (2011) 1.17
OsTIR1 and OsAFB2 downregulation via OsmiR393 overexpression leads to more tillers, early flowering and less tolerance to salt and drought in rice. PLoS One (2012) 1.17
Auxin and the integration of environmental signals into plant root development. Ann Bot (2013) 1.14
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A holistic view of nitrogen acquisition in plants. J Exp Bot (2011) 1.11
Ectopic expression of miR160 results in auxin hypersensitivity, cytokinin hyposensitivity, and inhibition of symbiotic nodule development in soybean. Plant Physiol (2013) 1.09
Systems approaches map regulatory networks downstream of the auxin receptor AFB3 in the nitrate response of Arabidopsis thaliana roots. Proc Natl Acad Sci U S A (2013) 1.08
Characterization of the stress associated microRNAs in Glycine max by deep sequencing. BMC Plant Biol (2011) 1.08
Genome-wide identification of soybean microRNAs and their targets reveals their organ-specificity and responses to phosphate starvation. BMC Genomics (2013) 1.01
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Root nutrient foraging. Plant Physiol (2014) 0.99
Dissecting the effects of nitrate, sucrose and osmotic potential on Arabidopsis root and shoot system growth in laboratory assays. Philos Trans R Soc Lond B Biol Sci (2012) 0.97
Mutations in the TIR1 auxin receptor that increase affinity for auxin/indole-3-acetic acid proteins result in auxin hypersensitivity. Plant Physiol (2013) 0.97
Identification of miRNAs and their targets from Brassica napus by high-throughput sequencing and degradome analysis. BMC Genomics (2012) 0.96
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Identification of differentially expressed genes between sorghum genotypes with contrasting nitrogen stress tolerance by genome-wide transcriptional profiling. BMC Genomics (2014) 0.95
Nitrate regulates floral induction in Arabidopsis, acting independently of light, gibberellin and autonomous pathways. Planta (2010) 0.94
MicroRNAs as regulators in plant metal toxicity response. Front Plant Sci (2012) 0.94
NPK macronutrients and microRNA homeostasis. Front Plant Sci (2015) 0.94
Auxin and strigolactone signaling are required for modulation of Arabidopsis shoot branching by nitrogen supply. Plant Physiol (2014) 0.92
The Calcium Ion Is a Second Messenger in the Nitrate Signaling Pathway of Arabidopsis. Plant Physiol (2015) 0.91
Auxin perception is required for arbuscule development in arbuscular mycorrhizal symbiosis. Plant Physiol (2014) 0.90
Integrated RNA-seq and sRNA-seq analysis identifies novel nitrate-responsive genes in Arabidopsis thaliana roots. BMC Genomics (2013) 0.88
Combined small RNA and degradome sequencing reveals novel miRNAs and their targets in response to low nitrate availability in maize. Ann Bot (2013) 0.88
Characterization of miRNAs in response to short-term waterlogging in three inbred lines of Zea mays. PLoS One (2012) 0.88
Nitrate foraging by Arabidopsis roots is mediated by the transcription factor TCP20 through the systemic signaling pathway. Proc Natl Acad Sci U S A (2014) 0.88
miR393: integrator of environmental cues in auxin signaling? Plant Signal Behav (2011) 0.87
Plasticity regulators modulate specific root traits in discrete nitrogen environments. PLoS Genet (2013) 0.87
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Nitric oxide generated by nitrate reductase increases nitrogen uptake capacity by inducing lateral root formation and inorganic nitrogen uptake under partial nitrate nutrition in rice. J Exp Bot (2015) 0.86
Nitrate-Regulated Glutaredoxins Control Arabidopsis Primary Root Growth. Plant Physiol (2015) 0.86
Natural variation of root traits: from development to nutrient uptake. Plant Physiol (2014) 0.86
The Stable Level of Glutamine synthetase 2 Plays an Important Role in Rice Growth and in Carbon-Nitrogen Metabolic Balance. Int J Mol Sci (2015) 0.86
Nitrogen modulation of legume root architecture signaling pathways involves phytohormones and small regulatory molecules. Front Plant Sci (2013) 0.85
Roles of small RNAs in soybean defense against Phytophthora sojae infection. Plant J (2014) 0.84
Genome-wide analysis of miRNAs and Tasi-RNAs in Zea mays in response to phosphate deficiency. Funct Integr Genomics (2017) 0.84
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Accumulated expression level of cytosolic glutamine synthetase 1 gene (OsGS1;1 or OsGS1;2) alter plant development and the carbon-nitrogen metabolic status in rice. PLoS One (2014) 0.83
Systemic regulation of mineral homeostasis by micro RNAs. Front Plant Sci (2013) 0.83
MiR393 regulation of auxin signaling and redox-related components during acclimation to salinity in Arabidopsis. PLoS One (2014) 0.83
miR393 is required for production of proper auxin signalling outputs. PLoS One (2014) 0.82
Auxin perception: in the IAA of the beholder. Physiol Plant (2014) 0.82
Differentially expressed microRNA cohorts in seed development may contribute to poor grain filling of inferior spikelets in rice. BMC Plant Biol (2014) 0.82
Transcriptome profiling of root microRNAs reveals novel insights into taproot thickening in radish (Raphanus sativus L.). BMC Plant Biol (2015) 0.81
NO signaling is a key component of the root growth response to nitrate in Zea mays L. Plant Signal Behav (2014) 0.81
Elucidation of miRNAs-mediated responses to low nitrogen stress by deep sequencing of two soybean genotypes. PLoS One (2013) 0.81
Involvement of microRNA-related regulatory pathways in the glucose-mediated control of Arabidopsis early seedling development. J Exp Bot (2013) 0.81
Genetic control of root growth: from genes to networks. Ann Bot (2015) 0.81
Nitrate regulation of AFB3 and NAC4 gene expression in Arabidopsis roots depends on NRT1.1 nitrate transport function. Plant Signal Behav (2014) 0.80
miR393 contributes to the embryogenic transition induced in vitro in Arabidopsis via the modification of the tissue sensitivity to auxin treatment. Planta (2016) 0.79
MADS-box transcription factor AGL21 regulates lateral root development and responds to multiple external and physiological signals. Mol Plant (2014) 0.79
Root-type-specific plasticity in response to localized high nitrate supply in maize (Zea mays). Ann Bot (2015) 0.79
The nitrate transporter MtNPF6.8 (MtNRT1.3) transports abscisic acid and mediates nitrate regulation of primary root growth in Medicago truncatula. Plant Physiol (2014) 0.79
The Arabidopsis NRG2 Protein Mediates Nitrate Signaling and Interacts with and Regulates Key Nitrate Regulators. Plant Cell (2016) 0.79
CLE peptides regulate lateral root development in response to nitrogen nutritional status of plants. Plant Signal Behav (2014) 0.79
Identification of Rapeseed MicroRNAs Involved in Early Stage Seed Germination under Salt and Drought Stresses. Front Plant Sci (2016) 0.78
The miRNA-mediated post-transcriptional regulation of maize response to nitrate. Plant Signal Behav (2012) 0.78
Combined Small RNA and Degradome Sequencing Reveals Novel MiRNAs and Their Targets in the High-Yield Mutant Wheat Strain Yunong 3114. PLoS One (2015) 0.78
Differential profiling analysis of miRNAs reveals a regulatory role in low N stress response of Populus. Funct Integr Genomics (2014) 0.78
Responses of symbiotic nitrogen-fixing common bean to aluminum toxicity and delineation of nodule responsive microRNAs. Front Plant Sci (2015) 0.77
Inferring plant microRNA functional similarity using a weighted protein-protein interaction network. BMC Bioinformatics (2015) 0.77
MicroRNA857 Is Involved in the Regulation of Secondary Growth of Vascular Tissues in Arabidopsis. Plant Physiol (2015) 0.77
NPKS uptake, sensing, and signaling and miRNAs in plant nutrient stress. Protoplasma (2015) 0.76
MADS-box transcription factor OsMADS25 regulates root development through affection of nitrate accumulation in rice. PLoS One (2015) 0.76
Transcriptome analysis reveals regulatory networks underlying differential susceptibility to Botrytis cinerea in response to nitrogen availability in Solanum lycopersicum. Front Plant Sci (2015) 0.76
Cesium Toxicity Alters MicroRNA Processing and AGO1 Expressions in Arabidopsis thaliana. PLoS One (2015) 0.76
Knockdown of the partner protein OsNAR2.1 for high-affinity nitrate transport represses lateral root formation in a nitrate-dependent manner. Sci Rep (2015) 0.76
miRNAome analysis associated with anatomic and transcriptomic investigations reveal the polar exhibition of corky split vein in boron deficient Citrus sinensis. Mol Genet Genomics (2015) 0.76
Overexpression of Arabidopsis NLP7 improves plant growth under both nitrogen-limiting and -sufficient conditions by enhancing nitrogen and carbon assimilation. Sci Rep (2016) 0.76
Genome-Wide Identification of miRNAs and Their Targets Involved in the Developing Internodes under Maize Ears by Responding to Hormone Signaling. PLoS One (2016) 0.75
A new insight into root responses to external cues: Paradigm shift in nutrient sensing. Plant Signal Behav (2015) 0.75
Comparison of Small RNA Profiles of Glycine max and Glycine soja at Early Developmental Stages. Int J Mol Sci (2016) 0.75
Transcriptome and Degradome Sequencing Reveals Dormancy Mechanisms of Cunninghamia lanceolata Seeds. Plant Physiol (2016) 0.75
Periodic Lateral Root Priming: What Makes It Tick? Plant Cell (2017) 0.75
Small RNA and degradome profiling reveals miRNA regulation in the seed germination of ancient eudicot Nelumbo nucifera. BMC Genomics (2016) 0.75
Regulation of Non-coding RNAs in Heat Stress Responses of Plants. Front Plant Sci (2016) 0.75
A Populus TIR1 gene family survey reveals differential expression patterns and responses to 1-naphthaleneacetic acid and stress treatments. Front Plant Sci (2015) 0.75
A Role for Arabidopsis miR399f in Salt, Drought, and ABA Signaling. Mol Cells (2015) 0.75
MicroRNA393 is involved in nitrogen-promoted rice tillering through regulation of auxin signal transduction in axillary buds. Sci Rep (2016) 0.75
The developmental and environmental regulation of gravitropic setpoint angle in Arabidopsis and bean. Sci Rep (2017) 0.75
Nitrate: A Crucial Signal during Lateral Roots Development. Front Plant Sci (2017) 0.75
Overexpression of plum auxin receptor PslTIR1 in tomato alters plant growth, fruit development and fruit shelf-life characteristics. BMC Plant Biol (2016) 0.75
Food for thought: how nutrients regulate root system architecture. Curr Opin Plant Biol (2017) 0.75
N availability modulates the role of NPF3.1, a gibberellin transporter, in GA-mediated phenotypes in Arabidopsis. Planta (2016) 0.75
Durum wheat miRNAs in response to nitrogen starvation at the grain filling stage. PLoS One (2017) 0.75
Nitrate transporters: an overview in legumes. Planta (2017) 0.75
New insights into the roles of cucumber TIR1 homologs and miR393 in regulating fruit/seed set development and leaf morphogenesis. BMC Plant Biol (2017) 0.75
The auxin biosynthetic TRYPTOPHAN AMINOTRANSFERASE RELATED TaTAR2.1-3A increases wheat grain yield. Plant Physiol (2017) 0.75
Genome-wide identification of Hami melon miRNAs with putative roles during fruit development. PLoS One (2017) 0.75
Type-B ARABIDOPSIS RESPONSE REGULATORs Is Critical to the Specification of Shoot Stem Cell Niche by Dual Regulation of WUSCHEL. Plant Cell (2017) 0.75
Dancing with Hormones: A Current Perspective of Nitrate Signaling and Regulation in Arabidopsis. Front Plant Sci (2017) 0.75
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Genome-wide patterns of carbon and nitrogen regulation of gene expression validate the combined carbon and nitrogen (CN)-signaling hypothesis in plants. Genome Biol (2004) 1.53
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A systems view of nitrogen nutrient and metabolite responses in Arabidopsis. Curr Opin Plant Biol (2008) 1.48
Mapping molecular motions leading to charge delocalization with ultrabright electrons. Nature (2013) 1.47
Nitrogen economics of root foraging: transitive closure of the nitrate-cytokinin relay and distinct systemic signaling for N supply vs. demand. Proc Natl Acad Sci U S A (2011) 1.46
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Predictive network modeling of the high-resolution dynamic plant transcriptome in response to nitrate. Genome Biol (2010) 1.34
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Diamonds in the rough: mRNA-like non-coding RNAs. Trends Plant Sci (2008) 1.30
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Detailed analysis of a contiguous 22-Mb region of the maize genome. PLoS Genet (2009) 1.29
Overexpression of the ASN1 gene enhances nitrogen status in seeds of Arabidopsis. Plant Physiol (2003) 1.28
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New auxin analogs with growth-promoting effects in intact plants reveal a chemical strategy to improve hormone delivery. Proc Natl Acad Sci U S A (2008) 1.27
Genomic and genetic characterization of rice Cen3 reveals extensive transcription and evolutionary implications of a complex centromere. Plant Cell (2006) 1.27
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Root gravitropism is regulated by a transient lateral auxin gradient controlled by a tipping-point mechanism. Proc Natl Acad Sci U S A (2012) 1.22
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