Published in BMC Bioinformatics on March 01, 2006
The impact of quantitative optimization of hybridization conditions on gene expression analysis. BMC Bioinformatics (2011) 0.87
Quantitative monitoring of gene expression patterns with a complementary DNA microarray. Science (1995) 88.48
Normalization for cDNA microarray data: a robust composite method addressing single and multiple slide systematic variation. Nucleic Acids Res (2002) 40.03
Genome-wide location and function of DNA binding proteins. Science (2000) 31.25
Parallel human genome analysis: microarray-based expression monitoring of 1000 genes. Proc Natl Acad Sci U S A (1996) 24.18
High resolution analysis of DNA copy number variation using comparative genomic hybridization to microarrays. Nat Genet (1998) 21.52
A concise guide to cDNA microarray analysis. Biotechniques (2000) 8.36
Fundamentals of experimental design for cDNA microarrays. Nat Genet (2002) 7.49
Rapid analysis of the DNA-binding specificities of transcription factors with DNA microarrays. Nat Genet (2004) 6.33
Statistical design and the analysis of gene expression microarray data. Genet Res (2001) 5.32
The External RNA Controls Consortium: a progress report. Nat Methods (2005) 4.24
Applications of DNA tiling arrays for whole-genome analysis. Genomics (2005) 3.94
Optimization of oligonucleotide-based DNA microarrays. Nucleic Acids Res (2002) 3.36
Making and reading microarrays. Nat Genet (1999) 2.81
Comparative genomic hybridization. Annu Rev Genomics Hum Genet (2005) 2.34
Shotgun DNA microarrays and stage-specific gene expression in Plasmodium falciparum malaria. Mol Microbiol (2000) 1.84
Analysis of whole-genome microarray replicates using mixed models. Bioinformatics (2003) 1.73
In control: systematic assessment of microarray performance. EMBO Rep (2004) 1.55
Resource and hardware options for microarray-based experimentation. Brief Funct Genomic Proteomic (2003) 1.40
Identification and correction of spurious spatial correlations in microarray data. Biotechniques (2003) 1.38
OLIN: optimized normalization, visualization and quality testing of two-channel microarray data. Bioinformatics (2004) 1.20
Construction and usage of a onefold-coverage shotgun DNA microarray to characterize the metabolism of the archaeon Haloferax volcanii. Mol Microbiol (2003) 1.18
Assessing sources of variability in microarray gene expression data. Biotechniques (2002) 1.10
Robotic spotting of cDNA and oligonucleotide microarrays. Trends Biotechnol (2005) 1.02
There is no silver bullet--a guide to low-level data transforms and normalisation methods for microarray data. Brief Bioinform (2005) 0.99
A dynamic, web-accessible resource to process raw microarray scan data into consolidated gene expression values: importance of replication. Nucleic Acids Res (2004) 0.98
Identification and handling of artifactual gene expression profiles emerging in microarray hybridization experiments. Nucleic Acids Res (2004) 0.91
Protein biochips: A new and versatile platform technology for molecular medicine. Drug Discov Today (2005) 0.83
Small molecule microarrays: from proteins to mammalian cells - are we there yet? Trends Biotechnol (2005) 0.77
Identification of functional elements and regulatory circuits by Drosophila modENCODE. Science (2010) 12.39
A cis-regulatory map of the Drosophila genome. Nature (2011) 4.80
The DrosDel collection: a set of P-element insertions for generating custom chromosomal aberrations in Drosophila melanogaster. Genetics (2004) 3.71
A comprehensive map of insulator elements for the Drosophila genome. PLoS Genet (2010) 3.25
The DrosDel deletion collection: a Drosophila genomewide chromosomal deficiency resource. Genetics (2007) 3.08
Hereditary and acquired angioedema: problems and progress: proceedings of the third C1 esterase inhibitor deficiency workshop and beyond. J Allergy Clin Immunol (2004) 3.07
Improving reproducibility and sensitivity in identifying human proteins by shotgun proteomics. Anal Chem (2004) 2.53
CTCF genomic binding sites in Drosophila and the organisation of the bithorax complex. PLoS Genet (2007) 2.12
Fisherfolk are among groups most at risk of HIV: cross-country analysis of prevalence and numbers infected. AIDS (2005) 2.01
Affordability, availability and acceptability barriers to health care for the chronically ill: longitudinal case studies from South Africa. BMC Health Serv Res (2009) 1.95
A comprehensive gene expression atlas of sex- and tissue-specificity in the malaria vector, Anopheles gambiae. BMC Genomics (2011) 1.88
Stability and dynamics of polycomb target sites in Drosophila development. PLoS Genet (2008) 1.72
Genomic analysis of heat-shock factor targets in Drosophila. Genome Biol (2005) 1.53
Evidence for differential and redundant function of the Sox genes Dichaete and SoxN during CNS development in Drosophila. Development (2002) 1.45
Disruption of microtubule integrity initiates mitosis during CNS repair. Dev Cell (2012) 1.43
Transposable elements as tools for genomics and genetics in Drosophila. Brief Funct Genomic Proteomic (2003) 1.36
Genomic mapping of Suppressor of Hairy-wing binding sites in Drosophila. Genome Biol (2007) 1.29
Insect population control by homing endonuclease-based gene drive: an evaluation in Drosophila melanogaster. Genetics (2011) 1.28
Cardiovascular risk in type 2 diabetes is associated with variation at the PPARG locus: a Go-DARTS study. Arterioscler Thromb Vasc Biol (2004) 1.26
Sex-specific apoptosis regulates sexual dimorphism in the Drosophila embryonic gonad. Dev Cell (2003) 1.23
No backbone but lots of Sox: Invertebrate Sox genes. Int J Biochem Cell Biol (2009) 1.18
Latency of alpha-herpes viruses is accompanied by a chronic inflammation in human trigeminal ganglia but not in dorsal root ganglia. J Neuropathol Exp Neurol (2006) 1.15
Haplotype analysis of the PPARgamma Pro12Ala and C1431T variants reveals opposing associations with body weight. BMC Genet (2002) 1.15
Addressing the structural drivers of HIV: a luxury or necessity for programmes? J Int AIDS Soc (2012) 1.11
Microarray oligonucleotide probes. Methods Enzymol (2006) 1.09
Sex after ART: sexual partnerships established by HIV-infected persons taking anti-retroviral therapy in Eastern Uganda. Cult Health Sex (2009) 1.08
Gene expression during Drosophila melanogaster egg development before and after reproductive diapause. BMC Genomics (2009) 1.07
In vivo analysis of proteomes and interactomes using Parallel Affinity Capture (iPAC) coupled to mass spectrometry. Mol Cell Proteomics (2011) 1.05
Transcriptional dynamics elicited by a short pulse of notch activation involves feed-forward regulation by E(spl)/Hes genes. PLoS Genet (2013) 1.03
Recurrent episodes of skin angioedema and severe attacks of abdominal pain induced by oral contraceptives or hormone replacement therapy. Am J Med (2003) 1.03
Robotic spotting of cDNA and oligonucleotide microarrays. Trends Biotechnol (2005) 1.02
Optimising homing endonuclease gene drive performance in a semi-refractory species: the Drosophila melanogaster experience. PLoS One (2013) 1.01
Identifying targets of the Sox domain protein Dichaete in the Drosophila CNS via targeted expression of dominant negative proteins. BMC Dev Biol (2013) 1.00
Role of testis-specific gene expression in sex-chromosome evolution of Anopheles gambiae. Genetics (2011) 0.99
There is no silver bullet--a guide to low-level data transforms and normalisation methods for microarray data. Brief Bioinform (2005) 0.99
Disco clothing, female sexual motivation, and relationship status: is she dressed to impress? J Sex Res (2004) 0.96
Conserved genomic organisation of Group B Sox genes in insects. BMC Genet (2005) 0.96
Genome-wide analysis of the binding of the Hox protein Ultrabithorax and the Hox cofactor Homothorax in Drosophila. PLoS One (2011) 0.96
Variable sexually dimorphic gene expression in laboratory strains of Drosophila melanogaster. BMC Genomics (2007) 0.96
Tissue banking, bioinformatics, and electronic medical records: the front-end requirements for personalized medicine. J Oncol (2013) 0.95
Association of common variation in the PPARA gene with incident myocardial infarction in individuals with type 2 diabetes: a Go-DARTS study. Nucl Recept (2005) 0.95
Prediction of gene expression in embryonic structures of Drosophila melanogaster. PLoS Comput Biol (2007) 0.94
Attosecond tracing of correlated electron-emission in non-sequential double ionization. Nat Commun (2012) 0.94
The design and in vivo evaluation of engineered I-OnuI-based enzymes for HEG gene drive. PLoS One (2013) 0.91
The role of Dichaete in transcriptional regulation during Drosophila embryonic development. BMC Genomics (2013) 0.91
Drosophila melanogaster as a model system for drug discovery and pathway screening. Curr Opin Pharmacol (2002) 0.91
On the use of resampling tests for evaluating statistical significance of binding-site co-occurrence. BMC Bioinformatics (2010) 0.90
Conserved properties of Drosophila and human spermatozoal mRNA repertoires. Proc Biol Sci (2012) 0.90
SoxNeuro orchestrates central nervous system specification and differentiation in Drosophila and is only partially redundant with Dichaete. Genome Biol (2014) 0.89
Replacement of mouse Sox10 by the Drosophila ortholog Sox100B provides evidence for co-option of SoxE proteins into vertebrate-specific gene-regulatory networks through altered expression. Dev Biol (2010) 0.88
Temporally dynamic response to Wingless directs the sequential elaboration of the proximodistal axis of the Drosophila wing. Dev Biol (2003) 0.88
Genomic approaches to understanding Hox gene function. Adv Genet (2011) 0.88
The impact of quantitative optimization of hybridization conditions on gene expression analysis. BMC Bioinformatics (2011) 0.87
Expanding antiretroviral therapy provision in resource-constrained settings: social processes and their policy challenges. AIDS Care (2010) 0.85
ChIPing away at the genome: the new frontier travel guide. Mol Biosyst (2009) 0.84
Electron localization in molecular fragmentation of H2 by carrier-envelope phase stabilized laser pulses. Phys Rev Lett (2009) 0.84
Variants of the peroxisome proliferator-activated receptor gamma- and beta-adrenergic receptor genes are associated with measures of compensatory eating behaviors in young children. Am J Clin Nutr (2007) 0.84
Neighbourhood continuity is not required for correct testis gene expression in Drosophila. PLoS Biol (2010) 0.82
Spotted-dick, a zinc-finger protein of Drosophila required for expression of Orc4 and S phase. EMBO J (2005) 0.82
Polysaccharide microarrays for high-throughput screening of transglycosylase activities in plant extracts. Glycoconj J (2009) 0.81
How do insects react to novel inherited symbionts? A microarray analysis of Drosophila melanogaster response to the presence of natural and introduced Spiroplasma. Mol Ecol (2011) 0.81
Toward a complete Drosophila deficiency kit. Genome Biol (2012) 0.81
Sexually transmitted diseases and HIV/AIDS in Vanuatu: a cause for concern and action. N Z Med J (2005) 0.77
SNPing and chipping away at the fly genome. Nat Methods (2008) 0.75
The future of care for type 1 diabetes. CMAJ (2013) 0.75
Male preponderance in early diagnosed type 2 diabetes is associated with the ARE insertion/deletion polymorphism in the PPP1R3A locus. BMC Genet (2003) 0.75
Water and coffee: a systems approach to improving coffee harvesting work in Nicaragua. Hum Factors (2012) 0.75
From sequence to function: the impact of the genome sequence on Drosophila biology. Brief Funct Genomics (2012) 0.75