Published in BMC Genomics on May 24, 2009
Mechanisms of suspended animation are revealed by transcript profiling of diapause in the flesh fly. Proc Natl Acad Sci U S A (2010) 1.25
Ecdysteroid regulation of ovarian growth and oocyte maturation in the red flour beetle, Tribolium castaneum. Insect Biochem Mol Biol (2010) 1.09
Population transcriptomics of Drosophila melanogaster females. BMC Genomics (2011) 0.99
Sex peptide of Drosophila melanogaster males is a global regulator of reproductive processes in females. Proc Biol Sci (2012) 0.98
Changes in gene expression linked with adult reproductive diapause in a northern malt fly species: a candidate gene microarray study. BMC Ecol (2010) 0.94
Seasonal cues induce phenotypic plasticity of Drosophila suzukii to enhance winter survival. BMC Ecol (2016) 0.94
Transcriptome profiling of embryonic development rate in rainbow trout advanced backcross introgression lines. Mar Biotechnol (NY) (2010) 0.94
Genome wide gene-expression analysis of facultative reproductive diapause in the two-spotted spider mite Tetranychus urticae. BMC Genomics (2013) 0.93
The sleeping beauty: how reproductive diapause affects hormone signaling, metabolism, immune response and somatic maintenance in Drosophila melanogaster. PLoS One (2014) 0.91
RNA-Seq reveals early distinctions and late convergence of gene expression between diapause and quiescence in the Asian tiger mosquito, Aedes albopictus. J Exp Biol (2013) 0.87
Metabolic and proteomic profiling of diapause in the aphid parasitoid Praon volucre. PLoS One (2012) 0.85
Seasonal gene expression kinetics between diapause phases in Drosophila virilis group species and overwintering differences between diapausing and non-diapausing females. Sci Rep (2015) 0.85
Global transcriptome analysis identifies regulated transcripts and pathways activated during oogenesis and early embryogenesis in Atlantic cod. Mol Reprod Dev (2014) 0.84
Shotgun proteomic analysis on the diapause and non-diapause eggs of domesticated silkworm Bombyx mori. PLoS One (2013) 0.84
Genome-Wide Gene Expression in relation to Age in Large Laboratory Cohorts of Drosophila melanogaster. Genet Res Int (2015) 0.82
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Expression of genes involved in energy mobilization and osmoprotectant synthesis during thermal and dehydration stress in the Antarctic midge, Belgica antarctica. J Comp Physiol B (2012) 0.80
Global Transcriptional Profiling of Diapause and Climatic Adaptation in Drosophila melanogaster. Mol Biol Evol (2015) 0.80
Slowed aging during reproductive dormancy is reflected in genome-wide transcriptome changes in Drosophila melanogaster. BMC Genomics (2016) 0.79
Diapause, signal and molecular characteristics of overwintering Chilo suppressalis (Insecta: Lepidoptera: Pyralidae). Sci Rep (2013) 0.78
Seasonal phenotype-specific transcriptional reprogramming during metamorphosis in the European map butterfly Araschnia levana. Ecol Evol (2016) 0.76
Comparative Transcriptomics Reveals Key Gene Expression Differences between Diapausing and Non-Diapausing Adults of Culex pipiens. PLoS One (2016) 0.76
Early transcriptional events linked to induction of diapause revealed by RNAseq in larvae of drosophilid fly, Chymomyza costata. BMC Genomics (2015) 0.76
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Candidate transcriptomic sources of inbreeding depression in Drosophila melanogaster. PLoS One (2013) 0.75
Dormancy in embryos: insight from hydrated encysted embryos of an aquatic invertebrate. Mol Cell Proteomics (2017) 0.75
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Using FlyAtlas to identify better Drosophila melanogaster models of human disease. Nat Genet (2007) 12.62
Gene expression during the life cycle of Drosophila melanogaster. Science (2002) 11.36
FlyBase: genes and gene models. Nucleic Acids Res (2005) 11.15
The contributions of sex, genotype and age to transcriptional variance in Drosophila melanogaster. Nat Genet (2001) 8.70
A comparison of background correction methods for two-colour microarrays. Bioinformatics (2007) 8.59
The rapid evolution of reproductive proteins. Nat Rev Genet (2002) 6.88
Paucity of genes on the Drosophila X chromosome showing male-biased expression. Science (2003) 6.04
Sex-dependent gene expression and evolution of the Drosophila transcriptome. Science (2003) 5.67
Isolation of microRNA targets by miRNP immunopurification. RNA (2007) 5.50
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The evolution of sex-biased genes and sex-biased gene expression. Nat Rev Genet (2007) 5.43
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Negative genetic correlation for adult fitness between sexes reveals ontogenetic conflict in Drosophila. Proc Natl Acad Sci U S A (2001) 4.05
Nutrient control of gene expression in Drosophila: microarray analysis of starvation and sugar-dependent response. EMBO J (2002) 3.58
Clustering short time series gene expression data. Bioinformatics (2005) 3.48
A survey of ovary-, testis-, and soma-biased gene expression in Drosophila melanogaster adults. Genome Biol (2004) 3.21
The gifts that keep on giving: physiological functions and evolutionary dynamics of male seminal proteins in Drosophila. Heredity (Edinb) (2002) 3.21
Extensive sex-specific nonadditivity of gene expression in Drosophila melanogaster. Genetics (2004) 3.12
Stem cells and their progeny respond to nutritional changes during Drosophila oogenesis. Dev Biol (2001) 3.07
A core transcriptional network for early mesoderm development in Drosophila melanogaster. Genes Dev (2007) 3.01
X-linked female-sterile loci in Drosophila melanogaster. Genetics (1986) 2.94
Natural selection favors a newly derived timeless allele in Drosophila melanogaster. Science (2007) 2.42
Gene amplification as a developmental strategy: isolation of two developmental amplicons in Drosophila. Dev Cell (2004) 2.38
Insulin signaling and FOXO regulate the overwintering diapause of the mosquito Culex pipiens. Proc Natl Acad Sci U S A (2008) 2.16
Evolution in the fast lane: rapidly evolving sex-related genes in Drosophila. Genetics (2007) 2.10
Meeting the energetic demands of insect diapause: nutrient storage and utilization. J Insect Physiol (2007) 2.02
Evolutionary expressed sequence tag analysis of Drosophila female reproductive tracts identifies genes subjected to positive selection. Genetics (2004) 1.98
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Mutations in insulin signaling pathway alter juvenile hormone synthesis in Drosophila melanogaster. Gen Comp Endocrinol (2005) 1.76
Gene expression patterns associated with blood-feeding in the malaria mosquito Anopheles gambiae. BMC Genomics (2005) 1.73
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Widespread adaptive evolution of Drosophila genes with sex-biased expression. Genetics (2006) 1.67
Drosophila Melted modulates FOXO and TOR activity. Dev Cell (2005) 1.59
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Functional genomics identifies TOR-regulated genes that control growth and division. Curr Biol (2006) 1.57
An experimental evaluation of a loop versus a reference design for two-channel microarrays. Bioinformatics (2004) 1.54
Identification of tightly regulated groups of genes during Drosophila melanogaster embryogenesis. Mol Syst Biol (2007) 1.53
Ecdysteroids regulate yolk protein uptake by Drosophila melanogaster oocytes. J Insect Physiol (1998) 1.49
A genomic analysis of Drosophila somatic sexual differentiation and its regulation. Development (2004) 1.47
Insulin signaling is necessary for vitellogenesis in Drosophila melanogaster independent of the roles of juvenile hormone and ecdysteroids: female sterility of the chico1 insulin signaling mutation is autonomous to the ovary. J Insect Physiol (2005) 1.46
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Genetic control of germline sexual dimorphism in Drosophila. Int Rev Cytol (2002) 1.37
Natural variation in Drosophila melanogaster diapause due to the insulin-regulated PI3-kinase. Proc Natl Acad Sci U S A (2006) 1.36
Negligible Senescence during Reproductive Dormancy in Drosophila melanogaster. Am Nat (2001) 1.34
Molecular chaperones activate the Drosophila ecdysone receptor, an RXR heterodimer. Cell (2000) 1.29
The function of the broad-complex during Drosophila melanogaster oogenesis. Genetics (1999) 1.26
Signalling pathways involved in adult heart formation revealed by gene expression profiling in Drosophila. PLoS Genet (2007) 1.20
Molecular evolution and population genetic analysis of candidate female reproductive genes in Drosophila. Genetics (2006) 1.19
Cold hardening and transcriptional change in Drosophila melanogaster. Insect Mol Biol (2005) 1.09
Hormonal and genetic regulation of vitellogenesis in Drosophila. Q Rev Biol (1982) 1.06
The early gene Broad is involved in the ecdysteroid hierarchy governing vitellogenesis of the mosquito Aedes aegypti. J Mol Endocrinol (2004) 1.02
Photoperiodic diapause in Drosophila melanogaster involves a block to the juvenile hormone regulation of ovarian maturation. Gen Comp Endocrinol (1990) 1.00
Short time-series microarray analysis: methods and challenges. BMC Syst Biol (2008) 0.97
Variable sexually dimorphic gene expression in laboratory strains of Drosophila melanogaster. BMC Genomics (2007) 0.96
Adaptive protein evolution and regulatory divergence in Drosophila. Mol Biol Evol (2006) 0.94
Developmental and functional analysis of Jonah gene expression. Dev Biol (1985) 0.94
Rapid evolution of outer egg membrane proteins in the Drosophila melanogaster subgroup: a case of ecologically driven evolution of female reproductive traits. Mol Biol Evol (2007) 0.92
The detection of Jonah gene transcripts in Drosophila by in situ hybridization. EMBO J (1985) 0.88
Energy storage during reproductive diapause in the Drosophila melanogaster species group. J Comp Physiol B (1992) 0.88
Heat-shock-responsive genes are not involved in the adult diapause of Drosophila triauraria. Gene (2004) 0.87
Insect cold hardiness: a Canadian perspective. Cryo Letters (2002) 0.80
Identification of functional elements and regulatory circuits by Drosophila modENCODE. Science (2010) 12.39
A cis-regulatory map of the Drosophila genome. Nature (2011) 4.80
The DrosDel collection: a set of P-element insertions for generating custom chromosomal aberrations in Drosophila melanogaster. Genetics (2004) 3.71
A comprehensive map of insulator elements for the Drosophila genome. PLoS Genet (2010) 3.25
The DrosDel deletion collection: a Drosophila genomewide chromosomal deficiency resource. Genetics (2007) 3.08
Improving reproducibility and sensitivity in identifying human proteins by shotgun proteomics. Anal Chem (2004) 2.53
CTCF genomic binding sites in Drosophila and the organisation of the bithorax complex. PLoS Genet (2007) 2.12
Fisherfolk are among groups most at risk of HIV: cross-country analysis of prevalence and numbers infected. AIDS (2005) 2.01
Affordability, availability and acceptability barriers to health care for the chronically ill: longitudinal case studies from South Africa. BMC Health Serv Res (2009) 1.95
A comprehensive gene expression atlas of sex- and tissue-specificity in the malaria vector, Anopheles gambiae. BMC Genomics (2011) 1.88
Stability and dynamics of polycomb target sites in Drosophila development. PLoS Genet (2008) 1.72
Genomic analysis of heat-shock factor targets in Drosophila. Genome Biol (2005) 1.53
Evidence for differential and redundant function of the Sox genes Dichaete and SoxN during CNS development in Drosophila. Development (2002) 1.45
Disruption of microtubule integrity initiates mitosis during CNS repair. Dev Cell (2012) 1.43
Transposable elements as tools for genomics and genetics in Drosophila. Brief Funct Genomic Proteomic (2003) 1.36
Genomic mapping of Suppressor of Hairy-wing binding sites in Drosophila. Genome Biol (2007) 1.29
Insect population control by homing endonuclease-based gene drive: an evaluation in Drosophila melanogaster. Genetics (2011) 1.28
Sex-specific apoptosis regulates sexual dimorphism in the Drosophila embryonic gonad. Dev Cell (2003) 1.23
No backbone but lots of Sox: Invertebrate Sox genes. Int J Biochem Cell Biol (2009) 1.18
Latency of alpha-herpes viruses is accompanied by a chronic inflammation in human trigeminal ganglia but not in dorsal root ganglia. J Neuropathol Exp Neurol (2006) 1.15
Addressing the structural drivers of HIV: a luxury or necessity for programmes? J Int AIDS Soc (2012) 1.11
Microarray oligonucleotide probes. Methods Enzymol (2006) 1.09
Sex after ART: sexual partnerships established by HIV-infected persons taking anti-retroviral therapy in Eastern Uganda. Cult Health Sex (2009) 1.08
In vivo analysis of proteomes and interactomes using Parallel Affinity Capture (iPAC) coupled to mass spectrometry. Mol Cell Proteomics (2011) 1.05
Transcriptional dynamics elicited by a short pulse of notch activation involves feed-forward regulation by E(spl)/Hes genes. PLoS Genet (2013) 1.03
Robotic spotting of cDNA and oligonucleotide microarrays. Trends Biotechnol (2005) 1.02
Optimising homing endonuclease gene drive performance in a semi-refractory species: the Drosophila melanogaster experience. PLoS One (2013) 1.01
Identifying targets of the Sox domain protein Dichaete in the Drosophila CNS via targeted expression of dominant negative proteins. BMC Dev Biol (2013) 1.00
Role of testis-specific gene expression in sex-chromosome evolution of Anopheles gambiae. Genetics (2011) 0.99
Genome-wide analysis of the binding of the Hox protein Ultrabithorax and the Hox cofactor Homothorax in Drosophila. PLoS One (2011) 0.96
Conserved genomic organisation of Group B Sox genes in insects. BMC Genet (2005) 0.96
Variable sexually dimorphic gene expression in laboratory strains of Drosophila melanogaster. BMC Genomics (2007) 0.96
Tissue banking, bioinformatics, and electronic medical records: the front-end requirements for personalized medicine. J Oncol (2013) 0.95
Prediction of gene expression in embryonic structures of Drosophila melanogaster. PLoS Comput Biol (2007) 0.94
The design and in vivo evaluation of engineered I-OnuI-based enzymes for HEG gene drive. PLoS One (2013) 0.91
Drosophila melanogaster as a model system for drug discovery and pathway screening. Curr Opin Pharmacol (2002) 0.91
On the use of resampling tests for evaluating statistical significance of binding-site co-occurrence. BMC Bioinformatics (2010) 0.90
Conserved properties of Drosophila and human spermatozoal mRNA repertoires. Proc Biol Sci (2012) 0.90
SoxNeuro orchestrates central nervous system specification and differentiation in Drosophila and is only partially redundant with Dichaete. Genome Biol (2014) 0.89
Temporally dynamic response to Wingless directs the sequential elaboration of the proximodistal axis of the Drosophila wing. Dev Biol (2003) 0.88
Replacement of mouse Sox10 by the Drosophila ortholog Sox100B provides evidence for co-option of SoxE proteins into vertebrate-specific gene-regulatory networks through altered expression. Dev Biol (2010) 0.88
Genomic approaches to understanding Hox gene function. Adv Genet (2011) 0.88
The impact of quantitative optimization of hybridization conditions on gene expression analysis. BMC Bioinformatics (2011) 0.87
Expanding antiretroviral therapy provision in resource-constrained settings: social processes and their policy challenges. AIDS Care (2010) 0.85
ChIPing away at the genome: the new frontier travel guide. Mol Biosyst (2009) 0.84
Neighbourhood continuity is not required for correct testis gene expression in Drosophila. PLoS Biol (2010) 0.82
Spotted-dick, a zinc-finger protein of Drosophila required for expression of Orc4 and S phase. EMBO J (2005) 0.82
Toward a complete Drosophila deficiency kit. Genome Biol (2012) 0.81
Polysaccharide microarrays for high-throughput screening of transglycosylase activities in plant extracts. Glycoconj J (2009) 0.81
Sexually transmitted diseases and HIV/AIDS in Vanuatu: a cause for concern and action. N Z Med J (2005) 0.77
SimArray: a user-friendly and user-configurable microarray design tool. BMC Bioinformatics (2006) 0.77
The future of care for type 1 diabetes. CMAJ (2013) 0.75
SNPing and chipping away at the fly genome. Nat Methods (2008) 0.75
From sequence to function: the impact of the genome sequence on Drosophila biology. Brief Funct Genomics (2012) 0.75
Water and coffee: a systems approach to improving coffee harvesting work in Nicaragua. Hum Factors (2012) 0.75