Published in Trends Plant Sci on July 01, 2006
The ethylene response factors SNORKEL1 and SNORKEL2 allow rice to adapt to deep water. Nature (2009) 3.74
OsSPL14 promotes panicle branching and higher grain productivity in rice. Nat Genet (2010) 3.23
Towards the understanding of complex traits in rice: substantially or superficially? DNA Res (2009) 1.75
Meta-analysis of grain yield QTL identified during agricultural drought in grasses showed consensus. BMC Genomics (2011) 1.48
SNP markers and their impact on plant breeding. Int J Plant Genomics (2012) 1.32
High potential of a transposon mPing as a marker system in japonica x japonica cross in rice. DNA Res (2009) 1.10
Metabolic profiling of a mapping population exposes new insights in the regulation of seed metabolism and seed, fruit, and plant relations. PLoS Genet (2012) 1.06
Rice molecular breeding laboratories in the genomics era: Current status and future considerations. Int J Plant Genomics (2008) 1.04
Genome sequencing and genome resources in model legumes. Plant Physiol (2007) 1.04
Genetic dissection of maize phenology using an intraspecific introgression library. BMC Plant Biol (2011) 0.95
Identification of a Rice stripe necrosis virus resistance locus and yield component QTLs using Oryza sativa x O. glaberrima introgression lines. BMC Plant Biol (2010) 0.95
Small and round seed 5 gene encodes alpha-tubulin regulating seed cell elongation in rice. Rice (N Y) (2012) 0.91
Advances in genetical genomics of plants. Curr Genomics (2009) 0.86
Quantitative trait loci pyramiding for fruit quality traits in tomato. Mol Breed (2012) 0.84
A Chromosome Segment Substitution Library of Weedy Rice for Genetic Dissection of Complex Agronomic and Domestication Traits. PLoS One (2015) 0.83
Genome engineering and plant breeding: impact on trait discovery and development. Plant Cell Rep (2016) 0.83
Identification of quantitative trait loci controlling rice mature seed culturability using chromosomal segment substitution lines. Plant Cell Rep (2008) 0.82
Efficacy of pyramiding elite alleles for dynamic development of plant height in common wheat. Mol Breed (2013) 0.82
Pseudo-backcrossing design for rapidly pyramiding multiple traits into a preferential rice variety. Rice (N Y) (2015) 0.78
Detection and characterization of epistasis between QTLs on plant height in rice using single segment substitution lines. Breed Sci (2015) 0.78
Metabolic Profiling of Developing Pear Fruits Reveals Dynamic Variation in Primary and Secondary Metabolites, Including Plant Hormones. PLoS One (2015) 0.77
Differential Proteomic Analysis Using iTRAQ Reveals Alterations in Hull Development in Rice (Oryza sativa L.). PLoS One (2015) 0.77
Introgression of two chromosome regions for leaf photosynthesis from an indica rice into the genetic background of a japonica rice. J Exp Bot (2014) 0.77
Mapping quantitative trait loci for heat tolerance at anthesis in rice using chromosomal segment substitution lines. Breed Sci (2016) 0.77
Mendelizing all Components of a Pyramid of Three Yield QTL in Tomato. Front Plant Sci (2015) 0.76
Combining DNA pooling with selective recombinant genotyping for increased efficiency in fine mapping. Theor Appl Genet (2009) 0.75
QTL pyramiding for improving of cold tolerance at fertilization stage in rice. Breed Sci (2014) 0.75
Comparative Genomics Analyses Reveal Extensive Chromosome Colinearity and Novel Quantitative Trait Loci in Eucalyptus. PLoS One (2015) 0.75
GIBBERELLIN INSENSITIVE DWARF1 encodes a soluble receptor for gibberellin. Nature (2005) 5.60
Cytokinin oxidase regulates rice grain production. Science (2005) 5.60
Accumulation of phosphorylated repressor for gibberellin signaling in an F-box mutant. Science (2003) 4.44
The ethylene response factors SNORKEL1 and SNORKEL2 allow rice to adapt to deep water. Nature (2009) 3.74
The gibberellin signaling pathway is regulated by the appearance and disappearance of SLENDER RICE1 in nuclei. Plant Cell (2002) 3.41
An overview of gibberellin metabolism enzyme genes and their related mutants in rice. Plant Physiol (2004) 3.32
OsSPL14 promotes panicle branching and higher grain productivity in rice. Nat Genet (2010) 3.23
Erect leaves caused by brassinosteroid deficiency increase biomass production and grain yield in rice. Nat Biotechnol (2005) 2.89
Six-rowed barley originated from a mutation in a homeodomain-leucine zipper I-class homeobox gene. Proc Natl Acad Sci U S A (2007) 2.82
Identification and characterization of Arabidopsis gibberellin receptors. Plant J (2006) 2.82
The OsTB1 gene negatively regulates lateral branching in rice. Plant J (2003) 2.69
A rice brassinosteroid-deficient mutant, ebisu dwarf (d2), is caused by a loss of function of a new member of cytochrome P450. Plant Cell (2003) 2.58
Crown rootless1, which is essential for crown root formation in rice, is a target of an AUXIN RESPONSE FACTOR in auxin signaling. Plant Cell (2005) 2.56
Structural basis for gibberellin recognition by its receptor GID1. Nature (2008) 2.54
Mutations in mitochondrial carrier family gene SLC25A38 cause nonsyndromic autosomal recessive congenital sideroblastic anemia. Nat Genet (2009) 2.37
A novel cytochrome P450 is implicated in brassinosteroid biosynthesis via the characterization of a rice dwarf mutant, dwarf11, with reduced seed length. Plant Cell (2005) 2.30
Mutations in origin recognition complex gene ORC4 cause Meier-Gorlin syndrome. Nat Genet (2011) 2.18
Molecular interactions of a soluble gibberellin receptor, GID1, with a rice DELLA protein, SLR1, and gibberellin. Plant Cell (2007) 2.14
Loss-of-function of a rice brassinosteroid biosynthetic enzyme, C-6 oxidase, prevents the organized arrangement and polar elongation of cells in the leaves and stem. Plant J (2002) 2.14
The YABBY gene DROOPING LEAF regulates carpel specification and midrib development in Oryza sativa. Plant Cell (2004) 2.08
Mutations in centrosomal protein CEP152 in primary microcephaly families linked to MCPH4. Am J Hum Genet (2010) 2.05
Gibberellin receptor and its role in gibberellin signaling in plants. Annu Rev Plant Biol (2007) 2.05
A rice semi-dwarf gene, Tan-Ginbozu (D35), encodes the gibberellin biosynthesis enzyme, ent-kaurene oxidase. Plant Mol Biol (2004) 2.00
Highly sensitive and high-throughput analysis of plant hormones using MS-probe modification and liquid chromatography-tandem mass spectrometry: an application for hormone profiling in Oryza sativa. Plant Cell Physiol (2009) 1.99
Where do gibberellin biosynthesis and gibberellin signaling occur in rice plants? Plant J (2003) 1.87
Genetic manipulation of gibberellin metabolism in transgenic rice. Nat Biotechnol (2003) 1.83
Comprehensive transcriptome analysis of phytohormone biosynthesis and signaling genes in microspore/pollen and tapetum of rice. Plant Cell Physiol (2008) 1.77
Loss-of-function mutations of the rice GAMYB gene impair alpha-amylase expression in aleurone and flower development. Plant Cell (2003) 1.71
Gibberellin modulates anther development in rice via the transcriptional regulation of GAMYB. Plant Cell (2009) 1.65
Auxin biosynthesis by the YUCCA genes in rice. Plant Physiol (2007) 1.62
Identifying and exploiting grain yield genes in rice. Curr Opin Plant Biol (2008) 1.62
The GID1-mediated gibberellin perception mechanism is conserved in the Lycophyte Selaginella moellendorffii but not in the Bryophyte Physcomitrella patens. Plant Cell (2007) 1.52
White-core endosperm floury endosperm-4 in rice is generated by knockout mutations in the C-type pyruvate orthophosphate dikinase gene (OsPPDKB). Plant J (2005) 1.50
Artificial selection for a green revolution gene during japonica rice domestication. Proc Natl Acad Sci U S A (2011) 1.50
GAMYB controls different sets of genes and is differentially regulated by microRNA in aleurone cells and anthers. Plant J (2006) 1.48
The small interfering RNA production pathway is required for shoot meristem initiation in rice. Proc Natl Acad Sci U S A (2007) 1.46
A role for the ubiquitin-26S-proteasome pathway in gibberellin signaling. Trends Plant Sci (2003) 1.42
Isolation and characterization of a rice WUSCHEL-type homeobox gene that is specifically expressed in the central cells of a quiescent center in the root apical meristem. Plant J (2003) 1.42
Morphological alteration caused by brassinosteroid insensitivity increases the biomass and grain production of rice. Plant Physiol (2006) 1.41
GID2, an F-box subunit of the SCF E3 complex, specifically interacts with phosphorylated SLR1 protein and regulates the gibberellin-dependent degradation of SLR1 in rice. Plant J (2004) 1.41
Ectopic expression of KNOTTED1-like homeobox protein induces expression of cytokinin biosynthesis genes in rice. Plant Physiol (2006) 1.39
GID1-mediated gibberellin signaling in plants. Trends Plant Sci (2008) 1.38
Genetic approaches to crop improvement: responding to environmental and population changes. Nat Rev Genet (2008) 1.36
The role of OsBRI1 and its homologous genes, OsBRL1 and OsBRL3, in rice. Plant Physiol (2006) 1.32
Gibberellin regulates pollen viability and pollen tube growth in rice. Plant Cell (2007) 1.31
The role of QTLs in the breeding of high-yielding rice. Trends Plant Sci (2011) 1.31
Multiple loss-of-function of Arabidopsis gibberellin receptor AtGID1s completely shuts down a gibberellin signal. Plant J (2007) 1.31
A protocol for Agrobacterium-mediated transformation in rice. Nat Protoc (2006) 1.31
OryzaExpress: an integrated database of gene expression networks and omics annotations in rice. Plant Cell Physiol (2010) 1.30
New approach for rice improvement using a pleiotropic QTL gene for lodging resistance and yield. Nat Commun (2010) 1.30
Various spatiotemporal expression profiles of anther-expressed genes in rice. Plant Cell Physiol (2008) 1.29
Dissection of the phosphorylation of rice DELLA protein, SLENDER RICE1. Plant Cell Physiol (2005) 1.27
Characterization of a rice gene family encoding type-A diterpene cyclases. Biosci Biotechnol Biochem (2006) 1.26
A metastable DWARF1 epigenetic mutant affecting plant stature in rice. Proc Natl Acad Sci U S A (2009) 1.26
Characterization of the molecular mechanism underlying gibberellin perception complex formation in rice. Plant Cell (2010) 1.25
Gain of deleterious function causes an autoimmune response and Bateson-Dobzhansky-Muller incompatibility in rice. Mol Genet Genomics (2010) 1.24
Mitochondrial gene in the nuclear genome induces reproductive barrier in rice. Proc Natl Acad Sci U S A (2010) 1.22
Generating high-yielding varieties by genetic manipulation of plant architecture. Curr Opin Biotechnol (2004) 1.19
Isolation and characterization of dominant dwarf mutants, Slr1-d, in rice. Mol Genet Genomics (2008) 1.19
Mutation in pyrroline-5-carboxylate reductase 1 gene in families with cutis laxa type 2. Am J Hum Genet (2009) 1.17
Release of the repressive activity of rice DELLA protein SLR1 by gibberellin does not require SLR1 degradation in the gid2 mutant. Plant Cell (2008) 1.16
Mutation in the gene encoding ubiquitin ligase LRSAM1 in patients with Charcot-Marie-Tooth disease. PLoS Genet (2010) 1.15
Expression of novel rice gibberellin 2-oxidase gene is under homeostatic regulation by biologically active gibberellins. J Plant Res (2003) 1.15
The SCARECROW gene's role in asymmetric cell divisions in rice plants. Plant J (2003) 1.14
Diterpene cyclases responsible for the biosynthesis of phytoalexins, momilactones A, B, and oryzalexins A-F in rice. Biosci Biotechnol Biochem (2004) 1.14
Gibberellin signalling pathway. Curr Opin Plant Biol (2003) 1.13
Isolation of a rice regeneration quantitative trait loci gene and its application to transformation systems. Proc Natl Acad Sci U S A (2005) 1.12
The suppressive function of the rice DELLA protein SLR1 is dependent on its transcriptional activation activity. Plant J (2012) 1.09
Analysis of the rice mutant dwarf and gladius leaf 1. Aberrant katanin-mediated microtubule organization causes up-regulation of gibberellin biosynthetic genes independently of gibberellin signaling. Plant Physiol (2005) 1.09
OsPNH1 regulates leaf development and maintenance of the shoot apical meristem in rice. Plant J (2002) 1.08
The alpha-amylase induction in endosperm during rice seed germination is caused by gibberellin synthesized in epithelium. Plant Physiol (2002) 1.08
Production and characterization of auxin-insensitive rice by overexpression of a mutagenized rice IAA protein. Plant J (2006) 1.08
Two rice GRAS family genes responsive to N -acetylchitooligosaccharide elicitor are induced by phytoactive gibberellins: evidence for cross-talk between elicitor and gibberellin signaling in rice cells. Plant Mol Biol (2004) 1.07
Overexpression of a GRAS protein lacking the DELLA domain confers altered gibberellin responses in rice. Plant J (2005) 1.04
Characterization of a xyloglucan endotransglucosylase gene that is up-regulated by gibberellin in rice. Plant Physiol (2004) 1.04
Position dependent expression of GL2-type homeobox gene, Roc1: significance for protoderm differentiation and radial pattern formation in early rice embryogenesis. Plant J (2002) 1.03
A novel AP2-type transcription factor, SMALL ORGAN SIZE1, controls organ size downstream of an auxin signaling pathway. Plant Cell Physiol (2014) 0.99
Mutations in a novel serine protease PRSS56 in families with nanophthalmos. Mol Vis (2011) 0.99
OsCAD2 is the major CAD gene responsible for monolignol biosynthesis in rice culm. Plant Cell Rep (2011) 0.97
A rice gid1 suppressor mutant reveals that gibberellin is not always required for interaction between its receptor, GID1, and DELLA proteins. Plant Cell (2010) 0.97
Comprehensive network analysis of anther-expressed genes in rice by the combination of 33 laser microdissection and 143 spatiotemporal microarrays. PLoS One (2011) 0.97
The rice mutant dwarf bamboo shoot 1: a leaky mutant of the NACK-type kinesin-like gene can initiate organ primordia but not organ development. Plant Cell Physiol (2005) 0.96
Molecular biology of gibberellins signaling in higher plants. Int Rev Cell Mol Biol (2008) 0.94
A rice tryptophan deficient dwarf mutant, tdd1, contains a reduced level of indole acetic acid and develops abnormal flowers and organless embryos. Plant J (2009) 0.93
Functional analysis of cotton orthologs of GA signal transduction factors GID1 and SLR1. Plant Mol Biol (2008) 0.91
Survey of genes involved in rice secondary cell wall formation through a co-expression network. Plant Cell Physiol (2013) 0.89
A novel brassinolide-enhanced gene identified by cDNA microarray is involved in the growth of rice. Plant Mol Biol (2003) 0.89
Crystal structures of pyruvate phosphate dikinase from maize revealed an alternative conformation in the swiveling-domain motion. Biochemistry (2005) 0.89
Genes offering the potential for designing yield-related traits in rice. Curr Opin Plant Biol (2013) 0.88
Identification of transcription factors involved in rice secondary cell wall formation. Plant Cell Physiol (2013) 0.88
Reduction of gibberellin by low temperature disrupts pollen development in rice. Plant Physiol (2014) 0.87
gid1, a gibberellin-insensitive dwarf mutant, shows altered regulation of probenazole-inducible protein (PBZ1) in response to cold stress and pathogen attack. Plant Cell Environ (2006) 0.87
Adhesion of human osteoblast-like cells (Saos-2) to carbon nanotube sheets. Biomed Mater Eng (2009) 0.87
SSD1, which encodes a plant-specific novel protein, controls plant elongation by regulating cell division in rice. Proc Jpn Acad Ser B Phys Biol Sci (2010) 0.87
The Gibberellin perception system evolved to regulate a pre-existing GAMYB-mediated system during land plant evolution. Nat Commun (2011) 0.87
Differential expression pattern of C4 bundle sheath expression genes in rice, a C3 plant. Plant Cell Physiol (2005) 0.86
Involvement of homeobox genes in early body plan of monocot. Int Rev Cytol (2002) 0.86
Differential expression and affinities of Arabidopsis gibberellin receptors can explain variation in phenotypes of multiple knock-out mutants. Plant J (2009) 0.85