Published in Plant Mol Biol on August 17, 2006
Comparison of next generation sequencing technologies for transcriptome characterization. BMC Genomics (2009) 2.60
Comparison of the transcriptomes of American chestnut (Castanea dentata) and Chinese chestnut (Castanea mollissima) in response to the chestnut blight infection. BMC Plant Biol (2009) 2.10
PlantTribes: a gene and gene family resource for comparative genomics in plants. Nucleic Acids Res (2007) 1.65
The genetic manipulation of medicinal and aromatic plants. Plant Cell Rep (2007) 1.22
Comparative transcriptomics among floral organs of the basal eudicot Eschscholzia californica as reference for floral evolutionary developmental studies. Genome Biol (2010) 0.92
An EST dataset for Metasequoia glyptostroboides buds: the first EST resource for molecular genomics studies in Metasequoia. Planta (2012) 0.85
Floral morphogenesis in Euptelea (Eupteleaceae, Ranunculales). Ann Bot (2007) 0.85
Virus-induced gene silencing (VIGS) in Cysticapnos vesicaria, a zygomorphic-flowered Papaveraceae (Ranunculales, basal eudicots). Ann Bot (2012) 0.82
Characterization of the basal angiosperm Aristolochia fimbriata: a potential experimental system for genetic studies. BMC Plant Biol (2013) 0.78
In silico identification of miRNAs and their target genes and analysis of gene co-expression network in saffron (Crocus sativus L.) stigma. Mol Biol Res Commun (2016) 0.75
Mining expressed sequence tags of rapeseed (Brassica napus L.) to predict the drought responsive regulatory network. Physiol Mol Biol Plants (2015) 0.75
The Arabidopsis Information Resource (TAIR): a model organism database providing a centralized, curated gateway to Arabidopsis biology, research materials and community. Nucleic Acids Res (2003) 18.69
Toward an online repository of Standard Operating Procedures (SOPs) for (meta)genomic annotation. OMICS (2008) 18.69
Promoting coherent minimum reporting guidelines for biological and biomedical investigations: the MIBBI project. Nat Biotechnol (2008) 12.96
MetaCyc: a multiorganism database of metabolic pathways and enzymes. Nucleic Acids Res (2004) 10.71
Minimum information about a marker gene sequence (MIMARKS) and minimum information about any (x) sequence (MIxS) specifications. Nat Biotechnol (2011) 7.53
The MetaCyc database of metabolic pathways and enzymes and the BioCyc collection of pathway/genome databases. Nucleic Acids Res (2009) 7.33
Ancestral polyploidy in seed plants and angiosperms. Nature (2011) 7.00
The Earth Microbiome Project: Meeting report of the "1 EMP meeting on sample selection and acquisition" at Argonne National Laboratory October 6 2010. Stand Genomic Sci (2010) 6.30
Human embryonic stem cells derived by somatic cell nuclear transfer. Cell (2013) 5.91
ISA software suite: supporting standards-compliant experimental annotation and enabling curation at the community level. Bioinformatics (2010) 5.60
The draft genome of the transgenic tropical fruit tree papaya (Carica papaya Linnaeus). Nature (2008) 5.54
The MetaCyc database of metabolic pathways and enzymes and the BioCyc collection of pathway/genome databases. Nucleic Acids Res (2011) 5.34
Chapter 3. European guidelines for the management of acute nonspecific low back pain in primary care. Eur Spine J (2006) 5.26
Functional annotation of the Arabidopsis genome using controlled vocabularies. Plant Physiol (2004) 5.17
The MetaCyc database of metabolic pathways and enzymes and the BioCyc collection of Pathway/Genome Databases. Nucleic Acids Res (2013) 5.13
Mitochondrial gene replacement in primate offspring and embryonic stem cells. Nature (2009) 4.98
Toward interoperable bioscience data. Nat Genet (2012) 4.72
Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. Proc Natl Acad Sci U S A (2003) 4.70
Meeting report: the terabase metagenomics workshop and the vision of an Earth microbiome project. Stand Genomic Sci (2010) 4.70
Recharacterization of ancient DNA miscoding lesions: insights in the era of sequencing-by-synthesis. Nucleic Acids Res (2006) 4.70
Defining seasonal marine microbial community dynamics. ISME J (2011) 4.61
Polyploidy and angiosperm diversification. Am J Bot (2009) 4.41
Habitat-Lite: a GSC case study based on free text terms for environmental metadata. OMICS (2008) 4.40
The seasonal structure of microbial communities in the Western English Channel. Environ Microbiol (2009) 4.30
The first RSBI (ISA-TAB) workshop: "can a simple format work for complex studies?". OMICS (2008) 4.15
Widespread genome duplications throughout the history of flowering plants. Genome Res (2006) 4.07
A small molecule inhibitor of beta-catenin/CREB-binding protein transcription [corrected]. Proc Natl Acad Sci U S A (2004) 3.95
Anti-tumor activity of GW572016: a dual tyrosine kinase inhibitor blocks EGF activation of EGFR/erbB2 and downstream Erk1/2 and AKT pathways. Oncogene (2002) 3.87
Detection of large numbers of novel sequences in the metatranscriptomes of complex marine microbial communities. PLoS One (2008) 3.83
TAIR: a resource for integrated Arabidopsis data. Funct Integr Genomics (2002) 3.74
Towards germline gene therapy of inherited mitochondrial diseases. Nature (2012) 3.73
Laying the foundation for a Genomic Rosetta Stone: creating information hubs through the use of consensus identifiers. OMICS (2008) 3.71
The SOL Genomics Network: a comparative resource for Solanaceae biology and beyond. Plant Physiol (2005) 3.65
Development of FuGO: an ontology for functional genomics investigations. OMICS (2006) 3.59
The SCF(COI1) ubiquitin-ligase complexes are required for jasmonate response in Arabidopsis. Plant Cell (2002) 3.34
Mental health system in China: history, recent service reform and future challenges. World Psychiatry (2011) 3.23
Parkin, PINK1, and DJ-1 form a ubiquitin E3 ligase complex promoting unfolded protein degradation. J Clin Invest (2009) 3.17
Control of rice grain-filling and yield by a gene with a potential signature of domestication. Nat Genet (2008) 3.09
Metagenomic analysis of fever, thrombocytopenia and leukopenia syndrome (FTLS) in Henan Province, China: discovery of a new bunyavirus. PLoS Pathog (2011) 2.95
Surviving in a sea of data: a survey of plant genome data resources and issues in building data management systems. Plant Mol Biol (2002) 2.95
Identification, analysis, and utilization of conserved ortholog set markers for comparative genomics in higher plants. Plant Cell (2002) 2.93
Transcriptome and selected metabolite analyses reveal multiple points of ethylene control during tomato fruit development. Plant Cell (2005) 2.87
Methods for obtaining and analyzing whole chloroplast genome sequences. Methods Enzymol (2005) 2.86
Intramyocardial transplantation of autologous endothelial progenitor cells for therapeutic neovascularization of myocardial ischemia. Circulation (2003) 2.82
A standard MIGS/MIMS compliant XML Schema: toward the development of the Genomic Contextual Data Markup Language (GCDML). OMICS (2008) 2.82
The Sol Genomics Network (solgenomics.net): growing tomatoes using Perl. Nucleic Acids Res (2010) 2.74
Concept of sample in OMICS technology. OMICS (2006) 2.74
The evolution of the plastid chromosome in land plants: gene content, gene order, gene function. Plant Mol Biol (2011) 2.68
Antiemetic prophylaxis for office-based surgery: are the 5-HT3 receptor antagonists beneficial? Anesthesiology (2003) 2.64
The rice tapetum degeneration retardation gene is required for tapetum degradation and anther development. Plant Cell (2006) 2.62
Comparison of next generation sequencing technologies for transcriptome characterization. BMC Genomics (2009) 2.60
An algorithm that improves speech intelligibility in noise for normal-hearing listeners. J Acoust Soc Am (2009) 2.52
CD34-positive cells exhibit increased potency and safety for therapeutic neovascularization after myocardial infarction compared with total mononuclear cells. Circulation (2006) 2.51
Rapid mitochondrial DNA segregation in primate preimplantation embryos precedes somatic and germline bottleneck. Cell Rep (2012) 2.50
Identification of shared single copy nuclear genes in Arabidopsis, Populus, Vitis and Oryza and their phylogenetic utility across various taxonomic levels. BMC Evol Biol (2010) 2.50
The excess microsporocytes1 gene encodes a putative leucine-rich repeat receptor protein kinase that controls somatic and reproductive cell fates in the Arabidopsis anther. Genes Dev (2002) 2.46
A new class of regulatory genes underlying the cause of pear-shaped tomato fruit. Proc Natl Acad Sci U S A (2002) 2.46
The taxonomic and functional diversity of microbes at a temperate coastal site: a 'multi-omic' study of seasonal and diel temporal variation. PLoS One (2010) 2.44
Natural alleles at a tomato fruit size quantitative trait locus differ by heterochronic regulatory mutations. Proc Natl Acad Sci U S A (2002) 2.43
ESTs, cDNA microarrays, and gene expression profiling: tools for dissecting plant physiology and development. Plant J (2004) 2.42
Generation of chimeric rhesus monkeys. Cell (2012) 2.41
The Western English Channel contains a persistent microbial seed bank. ISME J (2011) 2.37
Ruling out coronary artery disease in primary care: development and validation of a simple prediction rule. CMAJ (2010) 2.37
The Chlamydomonas reinhardtii plastid chromosome: islands of genes in a sea of repeats. Plant Cell (2002) 2.36
The draft genome of watermelon (Citrullus lanatus) and resequencing of 20 diverse accessions. Nat Genet (2012) 2.33
Genome-wide analysis of basic/helix-loop-helix transcription factor family in rice and Arabidopsis. Plant Physiol (2006) 2.25
Sonic hedgehog myocardial gene therapy: tissue repair through transient reconstitution of embryonic signaling. Nat Med (2005) 2.24
A comparative genetic linkage map of eggplant (Solanum melongena) and its implications for genome evolution in the solanaceae. Genetics (2002) 2.24
Cloud BioLinux: pre-configured and on-demand bioinformatics computing for the genomics community. BMC Bioinformatics (2012) 2.22
Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis. Mol Biol Evol (2005) 2.18
The evolution of parasitism in plants. Trends Plant Sci (2010) 2.16
Comparative sequencing in the genus Lycopersicon. Implications for the evolution of fruit size in the domestication of cultivated tomatoes. Genetics (2002) 2.14
Comprehensive EST analysis of tomato and comparative genomics of fruit ripening. Plant J (2004) 2.11
Toward a standards-compliant genomic and metagenomic publication record. OMICS (2008) 2.11
Unlocking the potential of metagenomics through replicated experimental design. Nat Biotechnol (2012) 2.08
Regulation of Arabidopsis tapetum development and function by DYSFUNCTIONAL TAPETUM1 (DYT1) encoding a putative bHLH transcription factor. Development (2006) 2.04
Role of dynamin, synaptojanin, and endophilin in podocyte foot processes. J Clin Invest (2012) 2.02
A decadal view of biodiversity informatics: challenges and priorities. BMC Ecol (2013) 2.01
Comparative genome analyses of Arabidopsis spp.: inferring chromosomal rearrangement events in the evolutionary history of A. thaliana. Genome Res (2005) 2.01
Conservation of gene function in the solanaceae as revealed by comparative mapping of domestication traits in eggplant. Genetics (2002) 1.99
The United States of America and scientific research. PLoS One (2010) 1.98
Towards BioDBcore: a community-defined information specification for biological databases. Nucleic Acids Res (2010) 1.97
The evolution of the SEPALLATA subfamily of MADS-box genes: a preangiosperm origin with multiple duplications throughout angiosperm history. Genetics (2005) 1.95
Three immunomarker support vector machines-based prognostic classifiers for stage IB non-small-cell lung cancer. J Clin Oncol (2009) 1.91