Mutsumi Nishida

Author PubWeight™ 94.55‹?›

Top papers

Rank Title Journal Year PubWeight™‹?›
1 Major patterns of higher teleostean phylogenies: a new perspective based on 100 complete mitochondrial DNA sequences. Mol Phylogenet Evol 2003 2.57
2 Basal actinopterygian relationships: a mitogenomic perspective on the phylogeny of the "ancient fish". Mol Phylogenet Evol 2003 2.04
3 Mitogenomic evaluation of the historical biogeography of cichlids toward reliable dating of teleostean divergences. BMC Evol Biol 2008 1.90
4 Deep-ocean origin of the freshwater eels. Biol Lett 2010 1.72
5 The mitochondrial genome of spotted green pufferfish Tetraodon nigroviridis (Teleostei: Tetraodontiformes) and divergence time estimation among model organisms in fishes. Genes Genet Syst 2006 1.70
6 Molecular phylogeny and evolution of the freshwater eels genus Anguilla based on the whole mitochondrial genome sequences. Mol Phylogenet Evol 2005 1.61
7 Basal euteleostean relationships: a mitogenomic perspective on the phylogenetic reality of the "Protacanthopterygii". Mol Phylogenet Evol 2003 1.55
8 Deep-sea mystery solved: astonishing larval transformations and extreme sexual dimorphism unite three fish families. Biol Lett 2009 1.45
9 The mitochondrial genome of Indonesian coelacanth Latimeria menadoensis (Sarcopterygii: Coelacanthiformes) and divergence time estimation between the two coelacanths. Gene 2005 1.44
10 Evolutionary history of Otophysi (Teleostei), a major clade of the modern freshwater fishes: Pangaean origin and Mesozoic radiation. BMC Evol Biol 2011 1.34
11 MitoFish and MitoAnnotator: a mitochondrial genome database of fish with an accurate and automatic annotation pipeline. Mol Biol Evol 2013 1.28
12 Evolutionary history of anglerfishes (Teleostei: Lophiiformes): a mitogenomic perspective. BMC Evol Biol 2010 1.26
13 Evolution of trace amine associated receptor (TAAR) gene family in vertebrates: lineage-specific expansions and degradations of a second class of vertebrate chemosensory receptors expressed in the olfactory epithelium. Mol Biol Evol 2007 1.24
14 Using SINEs to probe ancient explosive speciation: "hidden" radiation of African cichlids? Mol Biol Evol 2003 1.21
15 Mitogenomic evidence for the monophyly of elopomorph fishes (Teleostei) and the evolutionary origin of the leptocephalus larva. Mol Phylogenet Evol 2004 1.20
16 Body plan convergence in the evolution of skates and rays (Chondrichthyes: Batoidea). Mol Phylogenet Evol 2011 1.18
17 Divergence time of the two regional medaka populations in Japan as a new time scale for comparative genomics of vertebrates. Biol Lett 2009 1.18
18 Complete mitochondrial DNA sequence of the Japanese spiny lobster, Panulirus japonicus (Crustacea: Decapoda). Gene 2002 1.17
19 Interrelationships of Atherinomorpha (medakas, flyingfishes, killifishes, silversides, and their relatives): The first evidence based on whole mitogenome sequences. Mol Phylogenet Evol 2008 1.15
20 Mitochondrial genomics of ostariophysan fishes: perspectives on phylogeny and biogeography. J Mol Evol 2003 1.13
21 Biogeography and evolution of the Carassius auratus-complex in East Asia. BMC Evol Biol 2010 1.11
22 Evolution of the deep-sea gulper eel mitochondrial genomes: large-scale gene rearrangements originated within the eels. Mol Biol Evol 2003 1.10
23 Interrelationships of the 11 gasterosteiform families (sticklebacks, pipefishes, and their relatives): a new perspective based on whole mitogenome sequences from 75 higher teleosts. Mol Phylogenet Evol 2007 1.09
24 Independent evolution of the specialized pharyngeal jaw apparatus in cichlid and labrid fishes. BMC Evol Biol 2007 1.09
25 Reconstructing the phylogenetic relationships of the earth's most diverse clade of freshwater fishes--order Cypriniformes (Actinopterygii: Ostariophysi): a case study using multiple nuclear loci and the mitochondrial genome. Mol Phylogenet Evol 2008 1.08
26 Complete mitochondrial DNA sequence of Tigriopus japonicus (Crustacea: Copepoda). Mar Biotechnol (NY) 2002 1.08
27 Evolutionary origin of the Scombridae (tunas and mackerels): members of a paleogene adaptive radiation with 14 other pelagic fish families. PLoS One 2013 1.07
28 Extensive lineage-specific gene duplication and evolution of the spiggin multi-gene family in stickleback. BMC Evol Biol 2007 1.01
29 Temporal pattern of loss/persistence of duplicate genes involved in signal transduction and metabolic pathways after teleost-specific genome duplication. BMC Evol Biol 2009 1.01
30 Evolution of feeding specialization in Tanganyikan scale-eating cichlids: a molecular phylogenetic approach. BMC Evol Biol 2007 1.00
31 Phylogenetic relationships among anchovies, sardines, herrings and their relatives (Clupeiformes), inferred from whole mitogenome sequences. Mol Phylogenet Evol 2006 1.00
32 Phylogenetic relationships and natural hybridization in rabbitfishes (Teleostei: Siganidae) inferred from mitochondrial and nuclear DNA analyses. Mol Phylogenet Evol 2007 1.00
33 Remarkable morphological stasis in an extant vertebrate despite tens of millions of years of divergence. Proc Biol Sci 2010 0.98
34 PCR-based approach for sequencing mitochondrial genomes of decapod crustaceans, with a practical example from kuruma prawn (Marsupenaeus japonicus). Mar Biotechnol (NY) 2004 0.98
35 Zooplankton diversity analysis through single-gene sequencing of a community sample. BMC Genomics 2009 0.97
36 Large-scale gene rearrangements in the mitochondrial genomes of two calanoid copepods Eucalanus bungii and Neocalanus cristatus (Crustacea), with notes on new versatile primers for the srRNA and COI genes. Gene 2004 0.96
37 Molecular systematics of the gonorynchiform fishes (Teleostei) based on whole mitogenome sequences: implications for higher-level relationships within the Otocephala. Mol Phylogenet Evol 2005 0.96
38 Comparable ages for the independent origins of electrogenesis in African and South American weakly electric fishes. PLoS One 2012 0.96
39 Gene rearrangements and evolution of tRNA pseudogenes in the mitochondrial genome of the parrotfish (Teleostei: Perciformes: Scaridae). J Mol Evol 2004 0.95
40 Evolution and origin of vomeronasal-type odorant receptor gene repertoire in fishes. BMC Evol Biol 2006 0.94
41 Multiple occurrences of spiggin genes in sticklebacks. Gene 2006 0.94
42 Monophyly, phylogenetic position and inter-familial relationships of the Alepocephaliformes (Teleostei) based on whole mitogenome sequences. Mol Phylogenet Evol 2007 0.94
43 Evolutionary patterns and selective pressures of odorant/pheromone receptor gene families in teleost fishes. PLoS One 2008 0.92
44 Stickleback phylogenies resolved: evidence from mitochondrial genomes and 11 nuclear genes. Mol Phylogenet Evol 2008 0.92
45 Mitochondrial phylogenomics of anchovies (family Engraulidae) and recurrent origins of pronounced miniaturization in the order Clupeiformes. Mol Phylogenet Evol 2009 0.91
46 Mitogenomic sequences and evidence from unique gene rearrangements corroborate evolutionary relationships of myctophiformes (Neoteleostei). BMC Evol Biol 2013 0.91
47 Mitogenomic evaluation of the unique facial nerve pattern as a phylogenetic marker within the percifom fishes (Teleostei: Percomorpha). Mol Phylogenet Evol 2009 0.91
48 A new perspective on phylogeny and evolution of tetraodontiform fishes (Pisces: Acanthopterygii) based on whole mitochondrial genome sequences: basal ecological diversification? BMC Evol Biol 2008 0.91
49 Evolution of vomeronasal-type odorant receptor genes in the zebrafish genome. Gene 2005 0.90
50 The historical biogeography of the freshwater knifefishes using mitogenomic approaches: a mesozoic origin of the Asian notopterids (Actinopterygii: Osteoglossomorpha). Mol Phylogenet Evol 2009 0.89
51 Complete mitochondrial DNA sequence of the swimming crab, Portunus trituberculatus (Crustacea: Decapoda: Brachyura). Gene 2003 0.89
52 Phylogeny and biogeography of highly diverged freshwater fish species (Leuciscinae, Cyprinidae, Teleostei) inferred from mitochondrial genome analysis. Gene 2012 0.88
53 Evolution of the mitochondrial genome in cephalochordata as inferred from complete nucleotide sequences from two epigonichthys species. J Mol Evol 2005 0.88
54 Phylogenetic position of tetraodontiform fishes within the higher teleosts: Bayesian inferences based on 44 whole mitochondrial genome sequences. Mol Phylogenet Evol 2007 0.87
55 Explosive speciation of Takifugu: another use of fugu as a model system for evolutionary biology. Mol Biol Evol 2008 0.87
56 Round and pointed-head grenadier fishes (Actinopterygii: Gadiformes) represent a single sister group: evidence from the complete mitochondrial genome sequences. Mol Phylogenet Evol 2006 0.86
57 Post-duplication charge evolution of phosphoglucose isomerases in teleost fishes through weak selection on many amino acid sites. BMC Evol Biol 2007 0.85
58 Phylogenetic position of a whale-fall lancelet (Cephalochordata) inferred from whole mitochondrial genome sequences. BMC Evol Biol 2007 0.85
59 Polymorphism in Nucleotide Sequence of Mitochondrial Intergenic Region in Scleractinian Coral (Galaxea fascicularis). Mar Biotechnol (NY) 2005 0.85
60 Multiple invasions into freshwater by pufferfishes (teleostei: tetraodontidae): a mitogenomic perspective. PLoS One 2011 0.84
61 In vivo visualization of vascular patterns of rotator cuff tears using contrast-enhanced ultrasound. Am J Sports Med 2010 0.83
62 Intron-loss evolution of hatching enzyme genes in Teleostei. BMC Evol Biol 2010 0.83
63 Genetic relationships and origin of two geographic groups of the freshwater threespine stickleback, 'hariyo'. Zoolog Sci 2003 0.83
64 Organization of the mitochondrial genome of Antarctic krill Euphausia superba (Crustacea: Malacostraca). Mar Biotechnol (NY) 2004 0.82
65 Transfer RNA gene arrangement and codon usage in vertebrate mitochondrial genomes: a new insight into gene order conservation. BMC Genomics 2010 0.82
66 Myocardial Shortening in 3 Orthogonal Directions and Its Transmural Variation in Patients With Nonobstructive Hypertrophic Cardiomyopathy. Circ J 2015 0.82
67 In vivo vascularity alterations in repaired rotator cuffs determined by contrast-enhanced ultrasound. Am J Sports Med 2011 0.81
68 Intraspecific variation in the mitochondrial genome among local populations of Medaka Oryzias latipes. Gene 2010 0.81
69 Conservation of the egg envelope digestion mechanism of hatching enzyme in euteleostean fishes. FEBS J 2010 0.81
70 Molecular phylogeny and stripe pattern evolution in the cardinalfish genus Apogon. Mol Phylogenet Evol 2005 0.81
71 Hidden diversity in a reef-dwelling sea slug, Pteraeolidia ianthina (Nudibranchia, Aeolidina), in the Northwestern Pacific. Zoolog Sci 2012 0.81
72 LuxA gene of light organ symbionts of the bioluminescent fish Acropoma japonicum (Acropomatidae) and Siphamia versicolor (Apogonidae) forms a lineage closely related to that of Photobacterium leiognathi ssp. mandapamensis. FEMS Microbiol Lett 2006 0.81
73 Diversification and adaptive evolution of putative sweet taste receptors in threespine stickleback. Gene 2007 0.81
74 Early diastolic mitral annular velocity at the interventricular septal annulus correctly reflects left ventricular longitudinal myocardial relaxation. Eur J Echocardiogr 2011 0.80
75 Mitogenomic evidence for an Indo-West Pacific origin of the Clupeoidei (Teleostei: Clupeiformes). PLoS One 2013 0.80
76 Evaluation of small bowel blood flow in healthy subjects receiving low-dose aspirin. World J Gastroenterol 2011 0.80
77 Ancient phylogenetic separation between Pacific and Atlantic cephalochordates as revealed by mitochondrial genome analysis. Zoolog Sci 2004 0.80
78 Evaluation of gastrointestinal injury and blood flow of small bowel during low-dose aspirin administration. J Clin Biochem Nutr 2011 0.79
79 New complete mitochondrial DNA sequence of the lancelet Branchiostoma lanceolatum (Cephalochordata) and the identity of this species' sequences. Zoolog Sci 2005 0.79
80 Screening the V2R-type putative odorant receptor gene repertoire in bitterling Tanakia lanceolata. Gene 2008 0.79
81 Sub-functionalization of duplicated genes in the evolution of nine-spined stickleback hatching enzyme. J Exp Zool B Mol Dev Evol 2013 0.79
82 Power Doppler signal calibration using capillary phantom for pannus vascularity in rheumatoid finger joint. A pilot study. Clin Exp Rheumatol 2011 0.78
83 Pathophysiological classification of functional dyspepsia using a novel drinking-ultrasonography test. Digestion 2010 0.78
84 Unexpected ceiling of genetic differentiation in the control region of the mitochondrial DNA between different subspecies of the ayu Plecoglossus altivelis. Zoolog Sci 2005 0.78
85 Evolution of multiple phosphodiesterase isoforms in stickleback involved in cAMP signal transduction pathway. BMC Syst Biol 2009 0.78
86 Electric charge divergence in proteins: insights into the evolution of their three-dimensional properties. Gene 2008 0.78
87 Adaptive evolution of fish hatching enzyme: one amino acid substitution results in differential salt dependency of the enzyme. J Exp Biol 2013 0.78
88 DNA sequences identify numerous cryptic species of the vertebrate: a lesson from the gobioid fish Schindleria. Mol Phylogenet Evol 2006 0.77
89 Different hatching strategies in embryos of two species, pacific herring Clupea pallasii and Japanese anchovy Engraulis japonicus, that belong to the same order Clupeiformes, and their environmental adaptation. J Exp Zool B Mol Dev Evol 2009 0.77
90 Molecular co-evolution of a protease and its substrate elucidated by analysis of the activity of predicted ancestral hatching enzyme. BMC Evol Biol 2013 0.77
91 Population structure of two closely related pelagic cichlids in Lake Victoria, Haplochromis pyrrhocephalus and H. laparogramma. Gene 2008 0.77
92 Value of Virtual Touch Quantification Elastography for Assessing Liver Congestion in Patients With Heart Failure. Circ J 2016 0.77
93 Novel strain rate index of contractility loss caused by mechanical dyssynchrony. - A predictor of response to cardiac resynchronization therapy-. Circ J 2011 0.76
94 Strain rate dispersion index can predict changes in left ventricular volume and adverse cardiac events following cardiac resynchronization therapy. Circ J 2013 0.76
95 Enhanced sonography using carbon dioxide gas for small hepatocellular carcinoma: a comparison study between pure carbon dioxide gas and carbon dioxide microbubbles. Radiat Med 2005 0.76
96 Hatching enzyme of the ovoviviparous black rockfish Sebastes schlegelii- environmental adaptation of the hatching enzyme and evolutionary aspects of formation of the pseudogene. FEBS J 2008 0.76
97 Comparison of gastric relaxation and sensory functions between functional dyspepsia and healthy subjects using novel drinking-ultrasonography test. Digestion 2013 0.75
98 Molecular phylogeny and possible scenario of ponyfish (Perciformes:Leiognathidae) evolution. Mol Phylogenet Evol 2004 0.75
99 Decreased aorto-septal angle may contribute to left ventricular diastolic dysfunction in healthy subjects. J Clin Ultrasound 2014 0.75
100 Molecular phylogeny of the antitropical genus Pseudolabrus (Perciformes: Labridae): evidence for a Southern Hemisphere origin. Mol Phylogenet Evol 2004 0.75
101 Unique patterns of pelvic fin evolution: a case study of balistoid fishes (Pisces: Tetraodontiformes) based on whole mitochondrial genome sequences. Mol Phylogenet Evol 2008 0.75
102 Low genetic differentiation between two geographically separated populations of demersal gadiform fishes in the Southern Hemisphere. Genes Genet Syst 2011 0.75
103 Angiotensin II receptor blocker, valsartan, increases myocardial blood volume and regresses hypertrophy in hypertensive patients. Circ J 2009 0.75
104 Proximate mechanisms causing morphological variation in a turban snail among different shores. Zoolog Sci 2006 0.75
105 Ayu (Plecoglossus altivelis) in a contact zone between amphidromous and landlocked forms: genetic analyses of populations in the Yodo River system. Zoolog Sci 2009 0.75
106 Heterotypy in the N-terminal region of growth/differentiation factor 5 (GDF5) mature protein during teleost evolution. Mol Biol Evol 2008 0.75
107 Isolation and characterization of 12 microsatellite loci for cross-species amplification in the cyprinid gudgeons Squalidus chankaensis and S. japonicus. Mol Ecol Resour 2009 0.75
108 Use of transabdominal ultrasonography to preoperatively determine T-stage of proven colon cancers. Abdom Imaging 2015 0.75
109 Isolation and characterization of 39 microsatellite loci in the endangered Japanese loach Leptobotia curta. Mol Ecol Resour 2008 0.75
110 Computer-Aided Diagnosis of Focal Liver Lesions Using Contrast-Enhanced Ultrasonography with Perflubutane Microbubbles. IEEE Trans Med Imaging 2017 0.75
111 Power Doppler signal calibration between ultrasound machines by use of a capillary-flow phantom for pannus vascularity in rheumatoid finger joints: a basic study. Radiol Phys Technol 2014 0.75