Published in Nucleic Acids Res on February 06, 2007
Telomerase RNA biogenesis involves sequential binding by Sm and Lsm complexes. Nature (2012) 1.12
Structural basis for m7G-cap hypermethylation of small nuclear, small nucleolar and telomerase RNA by the dimethyltransferase TGS1. Nucleic Acids Res (2009) 1.00
Trimethylguanosine capping selectively promotes expression of Rev-dependent HIV-1 RNAs. Proc Natl Acad Sci U S A (2010) 0.99
Mutational analyses of trimethylguanosine synthase (Tgs1) and Mud2: proteins implicated in pre-mRNA splicing. RNA (2010) 0.98
Composition of yeast snRNPs and snoRNPs in the absence of trimethylguanosine caps reveals nuclear cap binding protein as a gained U1 component implicated in the cold-sensitivity of tgs1Δ cells. Nucleic Acids Res (2011) 0.97
Spliceosomal snRNAs in the unicellular eukaryote Trichomonas vaginalis are structurally conserved but lack a 5'-cap structure. RNA (2008) 0.95
Structure-function analysis and genetic interactions of the yeast branchpoint binding protein Msl5. Nucleic Acids Res (2012) 0.94
Cap analog substrates reveal three clades of cap guanine-N2 methyltransferases with distinct methyl acceptor specificities. RNA (2009) 0.90
An essential role for trimethylguanosine RNA caps in Saccharomyces cerevisiae meiosis and their requirement for splicing of SAE3 and PCH2 meiotic pre-mRNAs. Nucleic Acids Res (2011) 0.89
The divergent eukaryote Trichomonas vaginalis has an m7G cap methyltransferase capable of a single N2 methylation. Nucleic Acids Res (2008) 0.88
Characterization of a mimivirus RNA cap guanine-N2 methyltransferase. RNA (2009) 0.88
Rev-ing up post-transcriptional HIV-1 RNA expression. RNA Biol (2011) 0.83
RNA methyltransferases involved in 5' cap biosynthesis. RNA Biol (2014) 0.80
Box H/ACA snoRNAs are preferred substrates for the trimethylguanosine synthase in the divergent unicellular eukaryote Trichomonas vaginalis. RNA (2012) 0.77
Two Routes to Genetic Suppression of RNA Trimethylguanosine Cap Deficiency via C-Terminal Truncation of U1 snRNP Subunit Snp1 or Overexpression of RNA Polymerase Subunit Rpo26. G3 (Bethesda) (2015) 0.77
Self-association of Trimethylguanosine Synthase Tgs1 is required for efficient snRNA/snoRNA trimethylation and pre-rRNA processing. Sci Rep (2015) 0.75
Improved method for high efficiency transformation of intact yeast cells. Nucleic Acids Res (1992) 34.33
Molecular genetic analysis of fission yeast Schizosaccharomyces pombe. Methods Enzymol (1991) 33.90
PCR-synthesis of marker cassettes with long flanking homology regions for gene disruptions in S. cerevisiae. Yeast (1996) 8.45
Cap trimethylation of U snRNA is cytoplasmic and dependent on U snRNP protein binding. Cell (1986) 5.59
Identification and comparison of stable and unstable mRNAs in Saccharomyces cerevisiae. Mol Cell Biol (1990) 5.47
SnRNAs, SnRNPs, and RNA processing. Annu Rev Biochem (1982) 5.28
Comparison of Schizosaccharomyces pombe expression systems. Nucleic Acids Res (1993) 4.65
Saccharomyces cerevisiae telomerase is an Sm small nuclear ribonucleoprotein particle. Nature (1999) 3.59
Hypermethylation of the cap structure of both yeast snRNAs and snoRNAs requires a conserved methyltransferase that is localized to the nucleolus. Mol Cell (2002) 2.19
mRNA capping enzyme. Isolation and characterization of the gene encoding mRNA guanylytransferase subunit from Saccharomyces cerevisiae. J Biol Chem (1992) 2.12
General purpose tagging vectors for fission yeast. Gene (1997) 2.10
A common maturation pathway for small nucleolar RNAs. EMBO J (1995) 2.02
Ongoing U snRNP biogenesis is required for the integrity of Cajal bodies. Mol Biol Cell (2006) 1.95
Yeast mRNA cap methyltransferase is a 50-kilodalton protein encoded by an essential gene. Mol Cell Biol (1995) 1.82
Mutational analysis of yeast mRNA capping enzyme. Proc Natl Acad Sci U S A (1994) 1.73
Active site of the mRNA-capping enzyme guanylyltransferase from Saccharomyces cerevisiae: similarity to the nucleotidyl attachment motif of DNA and RNA ligases. Proc Natl Acad Sci U S A (1994) 1.68
Structure and mechanism of mRNA cap (guanine-N7) methyltransferase. Mol Cell (2004) 1.64
trans-spliced Caenorhabditis elegans mRNAs retain trimethylguanosine caps. Mol Cell Biol (1990) 1.45
Characterization of human, Schizosaccharomyces pombe, and Candida albicans mRNA cap methyltransferases and complete replacement of the yeast capping apparatus by mammalian enzymes. J Biol Chem (1999) 1.38
Structure-function analysis of the mRNA cap methyltransferase of Saccharomyces cerevisiae. J Biol Chem (1997) 1.37
Trm11p and Trm112p are both required for the formation of 2-methylguanosine at position 10 in yeast tRNA. Mol Cell Biol (2005) 1.35
Mutational analysis of the Saccharomyces cerevisiae ABD1 gene: cap methyltransferase activity is essential for cell growth. Mol Cell Biol (1996) 1.32
Severe growth defect in a Schizosaccharomyces pombe mutant defective in intron lariat degradation. Mol Cell Biol (1997) 1.30
Structure-function analysis of yeast mRNA cap methyltransferase and high-copy suppression of conditional mutants by AdoMet synthase and the ubiquitin conjugating enzyme Cdc34p. Genetics (2000) 1.22
Sequence-structure-function relationships of Tgs1, the yeast snRNA/snoRNA cap hypermethylase. Nucleic Acids Res (2003) 1.17
Di-and trimethylated congeners of 7-methylguanine in Sindbis virus mRNA. Nature (1976) 1.14
Specificity and mechanism of RNA cap guanine-N2 methyltransferase (Tgs1). J Biol Chem (2004) 1.10
The mRNA capping apparatus as drug target and guide to eukaryotic phylogeny. Cold Spring Harb Symp Quant Biol (2001) 1.08
Additional methylation at the N(2)-position of the cap of 26S Semliki Forest virus late mRNA and initiation of translation. Virus Res (1986) 1.05
DTL, the Drosophila homolog of PIMT/Tgs1 nuclear receptor coactivator-interacting protein/RNA methyltransferase, has an essential role in development. J Biol Chem (2005) 1.05
Modulating HIV-1 replication by RNA interference directed against human transcription elongation factor SPT5. Retrovirology (2004) 1.05
Giardia lamblia RNA cap guanine-N2 methyltransferase (Tgs2). J Biol Chem (2005) 1.01
The box C/D motif directs snoRNA 5'-cap hypermethylation. Nucleic Acids Res (2000) 0.95
RNA triphosphatase is essential in Schizosaccharomyces pombe and Candida albicans. BMC Microbiol (2001) 0.90
Structure-based experimental confirmation of biochemical function to a methyltransferase, MJ0882, from hyperthermophile Methanococcus jannaschii. J Struct Funct Genomics (2002) 0.90
The Caenorhabditis elegans mRNA 5'-capping enzyme. In vitro and in vivo characterization. J Biol Chem (2003) 0.89
mRNA capping enzyme requirement for Caenorhabditis elegans viability. J Biol Chem (2003) 0.89
Deletion of individual mRNA capping genes is unexpectedly not lethal to Candida albicans and results in modified mRNA cap structures. Eukaryot Cell (2002) 0.79
Identification of microRNAs of the herpesvirus family. Nat Methods (2005) 12.98
SNCA variants are associated with increased risk for multiple system atrophy. Ann Neurol (2009) 3.55
Complete genome sequence of Kytococcus sedentarius type strain (541). Stand Genomic Sci (2009) 3.30
Friction and torque govern the relaxation of DNA supercoils by eukaryotic topoisomerase IB. Nature (2005) 2.91
Structure of an mRNA capping enzyme bound to the phosphorylated carboxy-terminal domain of RNA polymerase II. Mol Cell (2003) 2.22
Prp43 is an essential RNA-dependent ATPase required for release of lariat-intron from the spliceosome. J Biol Chem (2002) 2.18
Structure and mechanism of RNA ligase. Structure (2004) 2.00
Bacteriophage T4 RNA ligase 2 (gp24.1) exemplifies a family of RNA ligases found in all phylogenetic domains. Proc Natl Acad Sci U S A (2002) 1.93
Axin and GSK3- control Smad3 protein stability and modulate TGF- signaling. Genes Dev (2008) 1.93
The pathways and outcomes of mycobacterial NHEJ depend on the structure of the broken DNA ends. Genes Dev (2008) 1.90
Deciphering the RNA polymerase II CTD code in fission yeast. Mol Cell (2011) 1.89
Mechanism of nonhomologous end-joining in mycobacteria: a low-fidelity repair system driven by Ku, ligase D and ligase C. Nat Struct Mol Biol (2005) 1.86
What messenger RNA capping tells us about eukaryotic evolution. Nat Rev Mol Cell Biol (2002) 1.82
Structure-function analysis of STING activation by c[G(2',5')pA(3',5')p] and targeting by antiviral DMXAA. Cell (2013) 1.82
RtcB is the RNA ligase component of an Escherichia coli RNA repair operon. J Biol Chem (2011) 1.82
Crucial role for DNA ligase III in mitochondria but not in Xrcc1-dependent repair. Nature (2011) 1.80
Portability and fidelity of RNA-repair systems. Proc Natl Acad Sci U S A (2004) 1.76
Mechanistic plasticity of DNA topoisomerase IB: phosphate electrostatics dictate the need for a catalytic arginine. Structure (2005) 1.74
Cell type-specific three-dimensional structure of thalamocortical circuits in a column of rat vibrissal cortex. Cereb Cortex (2011) 1.72
Isolation and characterization of methicillin-resistant Staphylococcus aureus from pork farms and visiting veterinary students. PLoS One (2013) 1.69
An Hfe-dependent pathway mediates hyposideremia in response to lipopolysaccharide-induced inflammation in mice. Nat Genet (2004) 1.68
TFIIH and P-TEFb coordinate transcription with capping enzyme recruitment at specific genes in fission yeast. Mol Cell (2009) 1.66
RNA ligase structures reveal the basis for RNA specificity and conformational changes that drive ligation forward. Cell (2006) 1.66
Structural insights to how mammalian capping enzyme reads the CTD code. Mol Cell (2011) 1.64
Structure and mechanism of mRNA cap (guanine-N7) methyltransferase. Mol Cell (2004) 1.64
How Slu7 and Prp18 cooperate in the second step of yeast pre-mRNA splicing. RNA (2002) 1.64
RNA repair: an antidote to cytotoxic eukaryal RNA damage. Mol Cell (2008) 1.64
Structural basis for nick recognition by a minimal pluripotent DNA ligase. Nat Struct Mol Biol (2007) 1.63
Novel mechanism of RNA repair by RtcB via sequential 2',3'-cyclic phosphodiesterase and 3'-Phosphate/5'-hydroxyl ligation reactions. J Biol Chem (2011) 1.60
Genetic and biochemical analysis of the functional domains of yeast tRNA ligase. J Biol Chem (2003) 1.60
Ntr1 activates the Prp43 helicase to trigger release of lariat-intron from the spliceosome. Genes Dev (2007) 1.60
Interactions between fission yeast mRNA capping enzymes and elongation factor Spt5. J Biol Chem (2002) 1.59
Structure and mechanism of T4 polynucleotide kinase: an RNA repair enzyme. EMBO J (2002) 1.54
Biochemical and genetic analysis of the four DNA ligases of mycobacteria. J Biol Chem (2004) 1.54
RtcB, a novel RNA ligase, can catalyze tRNA splicing and HAC1 mRNA splicing in vivo. J Biol Chem (2011) 1.53
RNA ligase RtcB splices 3'-phosphate and 5'-OH ends via covalent RtcB-(histidinyl)-GMP and polynucleotide-(3')pp(5')G intermediates. Proc Natl Acad Sci U S A (2012) 1.51
Novel 3'-ribonuclease and 3'-phosphatase activities of the bacterial non-homologous end-joining protein, DNA ligase D. J Biol Chem (2005) 1.50
Mutational analysis of bacteriophage T4 RNA ligase 1. Different functional groups are required for the nucleotidyl transfer and phosphodiester bond formation steps of the ligation reaction. J Biol Chem (2003) 1.50
Mutational analysis defines the 5'-kinase and 3'-phosphatase active sites of T4 polynucleotide kinase. Nucleic Acids Res (2002) 1.50
RNA substrate specificity and structure-guided mutational analysis of bacteriophage T4 RNA ligase 2. J Biol Chem (2004) 1.49
Atomic structure and nonhomologous end-joining function of the polymerase component of bacterial DNA ligase D. Proc Natl Acad Sci U S A (2006) 1.48
Last stop on the road to repair: structure of E. coli DNA ligase bound to nicked DNA-adenylate. Mol Cell (2007) 1.48
An end-healing enzyme from Clostridium thermocellum with 5' kinase, 2',3' phosphatase, and adenylyltransferase activities. RNA (2005) 1.48
Tat stimulates cotranscriptional capping of HIV mRNA. Mol Cell (2002) 1.43
Mycobacterial nonhomologous end joining mediates mutagenic repair of chromosomal double-strand DNA breaks. J Bacteriol (2007) 1.42
Characterization of the NTPase, RNA-binding, and RNA helicase activities of the DEAH-box splicing factor Prp22. Biochemistry (2005) 1.41
Structure-function analysis of the kinase-CPD domain of yeast tRNA ligase (Trl1) and requirements for complementation of tRNA splicing by a plant Trl1 homolog. Nucleic Acids Res (2006) 1.39
How an RNA ligase discriminates RNA versus DNA damage. Mol Cell (2004) 1.39
AdnAB: a new DSB-resecting motor-nuclease from mycobacteria. Genes Dev (2009) 1.36
Characterization of dominant-negative mutants of the DEAH-box splicing factors Prp22 and Prp16. J Biol Chem (2002) 1.36
Bacterial nonhomologous end joining ligases preferentially seal breaks with a 3'-OH monoribonucleotide. J Biol Chem (2008) 1.36
A function of yeast mRNA cap methyltransferase, Abd1, in transcription by RNA polymerase II. Mol Cell (2004) 1.35
Motifs IV and V in the DEAH box splicing factor Prp22 are important for RNA unwinding, and helicase-defective Prp22 mutants are suppressed by Prp8. J Biol Chem (2003) 1.33
A poxvirus-like type IB topoisomerase family in bacteria. Proc Natl Acad Sci U S A (2002) 1.31
Crystal structure and nonhomologous end-joining function of the ligase component of Mycobacterium DNA ligase D. J Biol Chem (2006) 1.31
Characterization of the Schizosaccharomyces pombe Cdk9/Pch1 protein kinase: Spt5 phosphorylation, autophosphorylation, and mutational analysis. J Biol Chem (2003) 1.31
Structure-function analysis of T4 RNA ligase 2. J Biol Chem (2003) 1.30
Characterization of Agrobacterium tumefaciens DNA ligases C and D. Nucleic Acids Res (2007) 1.29
Remote phosphate contacts trigger assembly of the active site of DNA topoisomerase IB. Structure (2004) 1.28
Characterization of the CTD phosphatase Fcp1 from fission yeast. Preferential dephosphorylation of serine 2 versus serine 5. J Biol Chem (2002) 1.28
An RNA ligase from Deinococcus radiodurans. J Biol Chem (2004) 1.27
Structure-function analysis of yeast tRNA ligase. RNA (2005) 1.26
A primer-dependent polymerase function of pseudomonas aeruginosa ATP-dependent DNA ligase (LigD). J Biol Chem (2004) 1.25
Essential constituents of the 3'-phosphoesterase domain of bacterial DNA ligase D, a nonhomologous end-joining enzyme. J Biol Chem (2005) 1.25
Cellular strategies for regulating DNA supercoiling: a single-molecule perspective. Cell (2010) 1.25
Structure of the RNA 3'-phosphate cyclase-adenylate intermediate illuminates nucleotide specificity and covalent nucleotidyl transfer. Structure (2010) 1.25
Different strategies for carboxyl-terminal domain (CTD) recognition by serine 5-specific CTD phosphatases. J Biol Chem (2005) 1.24
Sensory experience restructures thalamocortical axons during adulthood. Neuron (2012) 1.23
Characterization of a baculovirus enzyme with RNA ligase, polynucleotide 5'-kinase, and polynucleotide 3'-phosphatase activities. J Biol Chem (2004) 1.23
Mycobacteria exploit three genetically distinct DNA double-strand break repair pathways. Mol Microbiol (2010) 1.22
Distinct enzymic functional groups are required for the phosphomonoesterase and phosphodiesterase activities of Clostridium thermocellum polynucleotide kinase/phosphatase. J Biol Chem (2006) 1.22
Mechanism of the phosphatase component of Clostridium thermocellum polynucleotide kinase-phosphatase. RNA (2005) 1.21
Mycobacterial UvrD1 is a Ku-dependent DNA helicase that plays a role in multiple DNA repair events, including double-strand break repair. J Biol Chem (2007) 1.21
The structure of Fcp1, an essential RNA polymerase II CTD phosphatase. Mol Cell (2008) 1.21
Reprogramming the tRNA-splicing activity of a bacterial RNA repair enzyme. Nucleic Acids Res (2007) 1.20
Mutations in PRP43 that uncouple RNA-dependent NTPase activity and pre-mRNA splicing function. Biochemistry (2006) 1.20
Interactions between fission yeast Cdk9, its cyclin partner Pch1, and mRNA capping enzyme Pct1 suggest an elongation checkpoint for mRNA quality control. J Biol Chem (2002) 1.20
Substrate specificity and structure-function analysis of the 3'-phosphoesterase component of the bacterial NHEJ protein, DNA ligase D. J Biol Chem (2006) 1.19
The sequential 2',3'-cyclic phosphodiesterase and 3'-phosphate/5'-OH ligation steps of the RtcB RNA splicing pathway are GTP-dependent. Nucleic Acids Res (2012) 1.19
Structure-function analysis of yeast RNA debranching enzyme (Dbr1), a manganese-dependent phosphodiesterase. Nucleic Acids Res (2005) 1.17
Characterization of the 2',3' cyclic phosphodiesterase activities of Clostridium thermocellum polynucleotide kinase-phosphatase and bacteriophage lambda phosphatase. Nucleic Acids Res (2007) 1.17
Vaccinia virus subverts a mitochondrial antiviral signaling protein-dependent innate immune response in keratinocytes through its double-stranded RNA binding protein, E3. J Virol (2008) 1.16
Conserved residues in domain Ia are required for the reaction of Escherichia coli DNA ligase with NAD+. J Biol Chem (2002) 1.15
Proton relay mechanism of general acid catalysis by DNA topoisomerase IB. J Biol Chem (2001) 1.15
Cyclin-dependent kinase 9 (Cdk9) of fission yeast is activated by the CDK-activating kinase Csk1, overlaps functionally with the TFIIH-associated kinase Mcs6, and associates with the mRNA cap methyltransferase Pcm1 in vivo. Mol Cell Biol (2006) 1.15
Complete genome sequence of Segniliparus rotundus type strain (CDC 1076). Stand Genomic Sci (2010) 1.15
Vaccinia virus infection attenuates innate immune responses and antigen presentation by epidermal dendritic cells. J Virol (2006) 1.14
Separable functions of the fission yeast Spt5 carboxyl-terminal domain (CTD) in capping enzyme binding and transcription elongation overlap with those of the RNA polymerase II CTD. Mol Cell Biol (2010) 1.14