Published in Plant J on June 12, 2007
The Arabidopsis Information Resource (TAIR): gene structure and function annotation. Nucleic Acids Res (2007) 14.24
Defensin-like polypeptide LUREs are pollen tube attractants secreted from synergid cells. Nature (2009) 2.96
Genome-wide expression profiling of the Arabidopsis female gametophyte identifies families of small, secreted proteins. PLoS Genet (2007) 1.87
The biochemistry and biology of extracellular plant lipid-transfer proteins (LTPs). Protein Sci (2007) 1.57
The ferroportin metal efflux proteins function in iron and cobalt homeostasis in Arabidopsis. Plant Cell (2009) 1.53
Defensin-like ZmES4 mediates pollen tube burst in maize via opening of the potassium channel KZM1. PLoS Biol (2010) 1.39
Small signaling peptides in Arabidopsis development: how cells communicate over a short distance. Plant Cell (2012) 1.38
A species-specific cluster of defensin-like genes encodes diffusible pollen tube attractants in Arabidopsis. PLoS Biol (2012) 1.36
Prediction of antimicrobial peptides based on sequence alignment and feature selection methods. PLoS One (2011) 1.34
Evolutionary origins of Brassicaceae specific genes in Arabidopsis thaliana. BMC Evol Biol (2011) 1.30
EFD Is an ERF transcription factor involved in the control of nodule number and differentiation in Medicago truncatula. Plant Cell (2008) 1.29
MYB98 positively regulates a battery of synergid-expressed genes encoding filiform apparatus localized proteins. Plant Cell (2007) 1.23
Jasmonate and ethylene dependent defence gene expression and suppression of fungal virulence factors: two essential mechanisms of Fusarium head blight resistance in wheat? BMC Genomics (2012) 1.21
Panallergens and their impact on the allergic patient. Allergy Asthma Clin Immunol (2010) 1.18
Post-translational modifications in secreted peptide hormones in plants. Plant Cell Physiol (2010) 1.16
Discovery and characterization of novel cyclotides originated from chimeric precursors consisting of albumin-1 chain a and cyclotide domains in the Fabaceae family. J Biol Chem (2011) 1.15
Genome sequence of the necrotrophic fungus Penicillium digitatum, the main postharvest pathogen of citrus. BMC Genomics (2012) 1.14
Small post-translationally modified Peptide signals in Arabidopsis. Arabidopsis Book (2011) 1.12
Plant twitter: ligands under 140 amino acids enforcing stomatal patterning. J Plant Res (2010) 1.10
Complex signals for simple cells: the expanding ranks of signals and receptors guiding stomatal development. Curr Opin Plant Biol (2010) 1.09
Gene expression in gut symbiotic organ of stinkbug affected by extracellular bacterial symbiont. PLoS One (2013) 1.08
Three MYB transcription factors control pollen tube differentiation required for sperm release. Curr Biol (2013) 1.03
Jasmonate biosynthesis and signaling in monocots: a comparative overview. Plant Cell Rep (2013) 0.99
Identification and characterization of pseudogenes in the rice gene complement. BMC Genomics (2009) 0.99
Defensins: antifungal lessons from eukaryotes. Front Microbiol (2014) 0.99
Blufensin1 negatively impacts basal defense in response to barley powdery mildew. Plant Physiol (2008) 0.97
Dimerization of plant defensin NaD1 enhances its antifungal activity. J Biol Chem (2012) 0.96
Antimicrobial Peptides from Plants. Pharmaceuticals (Basel) (2015) 0.96
Detecting small plant peptides using SPADA (Small Peptide Alignment Discovery Application). BMC Bioinformatics (2013) 0.95
The genome of the generalist plant pathogen Fusarium avenaceum is enriched with genes involved in redox, signaling and secondary metabolism. PLoS One (2014) 0.95
The RNA binding protein Tudor-SN is essential for stress tolerance and stabilizes levels of stress-responsive mRNAs encoding secreted proteins in Arabidopsis. Plant Cell (2010) 0.93
Regulatory patterns of a large family of defensin-like genes expressed in nodules of Medicago truncatula. PLoS One (2013) 0.90
Salt stress in Arabidopsis: lipid transfer protein AZI1 and its control by mitogen-activated protein kinase MPK3. Mol Plant (2013) 0.89
The Plant Peptidome: An Expanding Repertoire of Structural Features and Biological Functions. Plant Cell (2015) 0.88
Spatio-temporal expression patterns of Arabidopsis thaliana and Medicago truncatula defensin-like genes. PLoS One (2013) 0.88
Potential link between biotic defense activation and recalcitrance to induction of somatic embryogenesis in shoot primordia from adult trees of white spruce (Picea glauca). BMC Plant Biol (2013) 0.87
Tip-localized receptors control pollen tube growth and LURE sensing in Arabidopsis. Nature (2016) 0.86
Expanding the repertoire of secretory peptides controlling root development with comparative genome analysis and functional assays. J Exp Bot (2015) 0.86
Hidden weapons of microbial destruction in plant genomes. Genome Biol (2007) 0.86
Atypical DNA methylation of genes encoding cysteine-rich peptides in Arabidopsis thaliana. BMC Plant Biol (2012) 0.86
Shedding some light over the floral metabolism by arum lily (Zantedeschia aethiopica) spathe de novo transcriptome assembly. PLoS One (2014) 0.85
Identification of genes specifically or preferentially expressed in maize silk reveals similarity and diversity in transcript abundance of different dry stigmas. BMC Genomics (2012) 0.84
Chemical visualization of an attractant peptide, LURE. Plant Cell Physiol (2010) 0.84
Arabinogalactan protein 31 (AGP31), a putative network-forming protein in Arabidopsis thaliana cell walls? Ann Bot (2014) 0.83
Patterns of divergence of a large family of nodule cysteine-rich peptides in accessions of Medicago truncatula. Plant J (2014) 0.83
Plant antimicrobial peptides as potential anticancer agents. Biomed Res Int (2015) 0.83
Pea Albumin 1 subunit b (PA1b), a promising bioinsecticide of plant origin. Toxins (Basel) (2011) 0.82
A novel PCR-based method for high throughput prokaryotic expression of antimicrobial peptide genes. BMC Biotechnol (2012) 0.82
Comparison of the nodule vs. root transcriptome of the actinorhizal plant Datisca glomerata: actinorhizal nodules contain a specific class of defensins. PLoS One (2013) 0.82
The Medicago sativa gene index 1.2: a web-accessible gene expression atlas for investigating expression differences between Medicago sativa subspecies. BMC Genomics (2015) 0.82
Adaptive expansion of the maize maternally expressed gene (Meg) family involves changes in expression patterns and protein secondary structures of its members. BMC Plant Biol (2014) 0.81
A low molecular weight proteome comparison of fertile and male sterile 8 anthers of Zea mays. Plant Biotechnol J (2012) 0.81
Arabidopsis CBP1 Is a Novel Regulator of Transcription Initiation in Central Cell-Mediated Pollen Tube Guidance. Plant Cell (2015) 0.81
A highly conserved gene island of three genes on chromosome 3B of hexaploid wheat: diverse gene function and genomic structure maintained in a tightly linked block. BMC Plant Biol (2010) 0.81
Plant cystine-knot peptides: pharmacological perspectives. Br J Clin Pharmacol (2016) 0.80
CS-AMPPred: an updated SVM model for antimicrobial activity prediction in cysteine-stabilized peptides. PLoS One (2012) 0.80
Structure and expression of GSL1 and GSL2 genes encoding gibberellin stimulated-like proteins in diploid and highly heterozygous tetraploid potato reveals their highly conserved and essential status. BMC Genomics (2014) 0.80
Detailed analysis of putative genes encoding small proteins in legume genomes. Front Plant Sci (2013) 0.79
Label-free nanoUPLC-MSE based quantification of antimicrobial peptides from the leaf apoplast of Nicotiana attenuata. BMC Plant Biol (2015) 0.79
Identification of small secreted peptides (SSPs) in maize and expression analysis of partial SSP genes in reproductive tissues. Planta (2014) 0.79
Global analysis of proline-rich tandem repeat proteins reveals broad phylogenetic diversity in plant secretomes. PLoS One (2011) 0.78
Rapid turnover of antimicrobial-type cysteine-rich protein genes in closely related Oryza genomes. Mol Genet Genomics (2015) 0.77
Synthesis, screening, and sequencing of cysteine-rich one-bead one-compound peptide libraries. J Comb Chem (2008) 0.77
The Brassicaceae-specific EWR1 gene provides resistance to vascular wilt pathogens. PLoS One (2014) 0.77
Gametophytic pollen tube guidance: attractant peptides, gametic controls, and receptors. Plant Physiol (2016) 0.77
Crystallization and preliminary X-ray crystallographic analysis of the plant defensin NaD1. Acta Crystallogr Sect F Struct Biol Cryst Commun (2011) 0.76
A Comprehensive Analysis of RALF Proteins in Green Plants Suggests There Are Two Distinct Functional Groups. Front Plant Sci (2017) 0.75
Exploring structural variation and gene family architecture with De Novo assemblies of 15 Medicago genomes. BMC Genomics (2017) 0.75
PCP-B class pollen coat proteins are key regulators of the hydration checkpoint in Arabidopsis thaliana pollen-stigma interactions. New Phytol (2016) 0.75
Bacterial cell biology outside the streetlight. Environ Microbiol (2016) 0.75
Identification and analysis of the stigma and embryo sac-preferential/specific genes in rice pistils. BMC Plant Biol (2017) 0.75
ARA-PEPs: a repository of putative sORF-encoded peptides in Arabidopsis thaliana. BMC Bioinformatics (2017) 0.75
Post-Translational Modification and Secretion of Azelaic Acid Induced 1 (AZI1), a Hybrid Proline-Rich Protein from Arabidopsis. Int J Mol Sci (2016) 0.75
Auxin and Cell Wall Invertase Related Signaling during Rice Grain Development. Plants (Basel) (2014) 0.75
Comparative Analysis of the Bacterial Membrane Disruption Effect of Two Natural Plant Antimicrobial Peptides. Front Microbiol (2017) 0.75
A Non-specific Setaria italica Lipid Transfer Protein Gene Plays a Critical Role under Abiotic Stress. Front Plant Sci (2016) 0.75
Genome-wide analysis identifies gain and loss/change of function within the small multigenic insecticidal Albumin 1 family of Medicago truncatula. BMC Plant Biol (2016) 0.75
Transcript profiles of maize embryo sacs and preliminary identification of genes involved in the embryo sac-pollen tube interaction. Front Plant Sci (2014) 0.75
One new kind of phytohormonal signaling integrator: Up-and-coming GASA family genes. Plant Signal Behav (2017) 0.75
In silico identification, structural characterization, and phylogenetic analysis of MdesDEF-2: a novel defensin from the Hessian fly, Mayetiola destructor. J Mol Model (2014) 0.75
Genome-wide identification of pistil-specific genes expressed during fruit set initiation in tomato (Solanum lycopersicum). PLoS One (2017) 0.75
Expansion and evolutionary patterns of cysteine-rich peptides in plants. BMC Genomics (2017) 0.75
Empirical analysis of transcriptional activity in the Arabidopsis genome. Science (2003) 11.62
Improving the Arabidopsis genome annotation using maximal transcript alignment assemblies. Nucleic Acids Res (2003) 11.03
The Medicago genome provides insight into the evolution of rhizobial symbioses. Nature (2011) 4.94
Full-length messenger RNA sequences greatly improve genome annotation. Genome Biol (2002) 4.90
Sequencing Medicago truncatula expressed sequenced tags using 454 Life Sciences technology. BMC Genomics (2006) 4.54
Development and evaluation of an Arabidopsis whole genome Affymetrix probe array. Plant J (2004) 4.30
Complete reannotation of the Arabidopsis genome: methods, tools, protocols and the final release. BMC Biol (2005) 4.18
RNA-Seq Atlas of Glycine max: a guide to the soybean transcriptome. BMC Plant Biol (2010) 3.12
Annotation of the Arabidopsis genome. Plant Physiol (2003) 3.06
Legume genome evolution viewed through the Medicago truncatula and Lotus japonicus genomes. Proc Natl Acad Sci U S A (2006) 2.61
Genome organization of more than 300 defensin-like genes in Arabidopsis. Plant Physiol (2005) 2.54
Toward sequencing cotton (Gossypium) genomes. Plant Physiol (2007) 2.16
Transcript profiling coupled with spatial expression analyses reveals genes involved in distinct developmental stages of an arbuscular mycorrhizal symbiosis. Plant Cell (2003) 2.09
Accumulation of genome-specific transcripts, transcription factors and phytohormonal regulators during early stages of fiber cell development in allotetraploid cotton. Plant J (2006) 2.01
Genome-wide identification of nodule-specific transcripts in the model legume Medicago truncatula. Plant Physiol (2002) 1.89
An atlas of over 90,000 conserved noncoding sequences provides insight into crucifer regulatory regions. Nat Genet (2013) 1.68
Computational identification and characterization of novel genes from legumes. Plant Physiol (2004) 1.67
Central cell-derived peptides regulate early embryo patterning in flowering plants. Science (2014) 1.66
Large-scale transcriptome analysis in chickpea (Cicer arietinum L.), an orphan legume crop of the semi-arid tropics of Asia and Africa. Plant Biotechnol J (2011) 1.66
Phosphorus stress in common bean: root transcript and metabolic responses. Plant Physiol (2007) 1.65
Arbuscular mycorrhizal symbiosis is accompanied by local and systemic alterations in gene expression and an increase in disease resistance in the shoots. Plant J (2007) 1.64
Legume transcription factors: global regulators of plant development and response to the environment. Plant Physiol (2007) 1.64
Sequencing and analysis of common bean ESTs. Building a foundation for functional genomics. Plant Physiol (2005) 1.61
A comprehensive resource of drought- and salinity- responsive ESTs for gene discovery and marker development in chickpea (Cicer arietinum L.). BMC Genomics (2009) 1.61
Identification and analyses of candidate genes for rpp4-mediated resistance to Asian soybean rust in soybean. Plant Physiol (2009) 1.51
SSWAP: A Simple Semantic Web Architecture and Protocol for semantic web services. BMC Bioinformatics (2009) 1.49
Transcript analysis of early nodulation events in Medicago truncatula. Plant Physiol (2005) 1.49
Novel SSR markers from BAC-end sequences, DArT arrays and a comprehensive genetic map with 1,291 marker loci for chickpea (Cicer arietinum L.). PLoS One (2011) 1.48
The complete chloroplast genome sequence of Gossypium hirsutum: organization and phylogenetic relationships to other angiosperms. BMC Genomics (2006) 1.47
Development of Arabidopsis whole-genome microarrays and their application to the discovery of binding sites for the TGA2 transcription factor in salicylic acid-treated plants. Plant J (2006) 1.47
A unique set of 11,008 onion expressed sequence tags reveals expressed sequence and genomic differences between the monocot orders Asparagales and Poales. Plant Cell (2003) 1.46
Analysis of BAC-end sequences (BESs) and development of BES-SSR markers for genetic mapping and hybrid purity assessment in pigeonpea (Cajanus spp.). BMC Plant Biol (2011) 1.45
Analysis of the cDNAs of hypothetical genes on Arabidopsis chromosome 2 reveals numerous transcript variants. Plant Physiol (2005) 1.44
Highly syntenic regions in the genomes of soybean, Medicago truncatula, and Arabidopsis thaliana. BMC Plant Biol (2005) 1.43
Circadian regulation of the PhCCD1 carotenoid cleavage dioxygenase controls emission of beta-ionone, a fragrance volatile of petunia flowers. Plant Physiol (2004) 1.40
Sequencing and analysis of the gene-rich space of cowpea. BMC Genomics (2008) 1.36
Complementary genetic and genomic approaches help characterize the linkage group I seed protein QTL in soybean. BMC Plant Biol (2010) 1.31
Insights into the Musa genome: syntenic relationships to rice and between Musa species. BMC Genomics (2008) 1.30
The Soybean Genome Database (SoyGD): a browser for display of duplicated, polyploid, regions and sequence tagged sites on the integrated physical and genetic maps of Glycine max. Nucleic Acids Res (2006) 1.28
Cloning and sequencing of cDNAs for hypothetical genes from chromosome 2 of Arabidopsis. Plant Physiol (2002) 1.27
A community resource for high-throughput quantitative RT-PCR analysis of transcription factor gene expression in Medicago truncatula. Plant Methods (2008) 1.27
RNA interference identifies a calcium-dependent protein kinase involved in Medicago truncatula root development. Plant Cell (2005) 1.26
MtDB: a database for personalized data mining of the model legume Medicago truncatula transcriptome. Nucleic Acids Res (2003) 1.22
A BAC end view of the Musa acuminata genome. BMC Plant Biol (2007) 1.20
Differential response of the plant Medicago truncatula to its symbiont Sinorhizobium meliloti or an exopolysaccharide-deficient mutant. Proc Natl Acad Sci U S A (2008) 1.20
A newly-developed community microarray resource for transcriptome profiling in Brassica species enables the confirmation of Brassica-specific expressed sequences. BMC Plant Biol (2009) 1.20
Whole genome shotgun sequencing of Brassica oleracea and its application to gene discovery and annotation in Arabidopsis. Genome Res (2005) 1.19
Microarray analysis of iron deficiency chlorosis in near-isogenic soybean lines. BMC Genomics (2007) 1.18
Complete plastid genome sequence of Daucus carota: implications for biotechnology and phylogeny of angiosperms. BMC Genomics (2006) 1.17
Integrating microarray analysis and the soybean genome to understand the soybeans iron deficiency response. BMC Genomics (2009) 1.17
Gene expression profiling of M. truncatula transcription factors identifies putative regulators of grain legume seed filling. Plant Mol Biol (2008) 1.15
Distinct biphasic mRNA changes in response to Asian soybean rust infection. Mol Plant Microbe Interact (2007) 1.14
Spotted cotton oligonucleotide microarrays for gene expression analysis. BMC Genomics (2007) 1.12
A first survey of the rye (Secale cereale) genome composition through BAC end sequencing of the short arm of chromosome 1R. BMC Plant Biol (2008) 1.11
Genome-wide SNP discovery in tetraploid alfalfa using 454 sequencing and high resolution melting analysis. BMC Genomics (2011) 1.07
A transient decrease in reactive oxygen species in roots leads to root hair deformation in the legume-rhizobia symbiosis. New Phytol (2007) 1.06
Analysis of indole-3-butyric acid-induced adventitious root formation on Arabidopsis stem segments. J Exp Bot (2005) 1.06
Comparative analysis of 87,000 expressed sequence tags from the fumonisin-producing fungus Fusarium verticillioides. Fungal Genet Biol (2005) 1.06
The central role of PhEIN2 in ethylene responses throughout plant development in petunia. Plant Physiol (2004) 1.05
Identification, validation and high-throughput genotyping of transcribed gene SNPs in cassava. Theor Appl Genet (2011) 1.04
Soybean homologs of MPK4 negatively regulate defense responses and positively regulate growth and development. Plant Physiol (2011) 1.03
Complexity of genome evolution by segmental rearrangement in Brassica rapa revealed by sequence-level analysis. BMC Genomics (2009) 1.02
Genetic mapping of expressed sequences in onion and in silico comparisons with rice show scant colinearity. Mol Genet Genomics (2005) 1.00
The haustorial transcriptomes of Uromyces appendiculatus and Phakopsora pachyrhizi and their candidate effector families. Mol Plant Pathol (2013) 1.00
Gene expression analyses of Arabidopsis chromosome 2 using a genomic DNA amplicon microarray. Genome Res (2003) 0.99
Phylogenomics and the dynamic genome evolution of the genus Streptococcus. Genome Biol Evol (2014) 0.99
Petunia floral volatile benzenoid/phenylpropanoid genes are regulated in a similar manner. Phytochemistry (2009) 0.98
Novel paralogous gene families with potential function in legume nodules and seeds. Curr Opin Plant Biol (2006) 0.97
Sequence level analysis of recently duplicated regions in soybean [Glycine max (L.) Merr.] genome. DNA Res (2008) 0.96
Functional analysis of the Asian soybean rust resistance pathway mediated by Rpp2. Mol Plant Microbe Interact (2011) 0.96
Physiological and molecular characterization of aluminum resistance in Medicago truncatula. BMC Plant Biol (2008) 0.95
Gene expression patterns are correlated with genomic and genic structure in soybean. Genome (2011) 0.91
Experimental validation of novel genes predicted in the un-annotated regions of the Arabidopsis genome. BMC Genomics (2007) 0.91
The receptor like kinase at Rhg1-a/Rfs2 caused pleiotropic resistance to sudden death syndrome and soybean cyst nematode as a transgene by altering signaling responses. BMC Genomics (2012) 0.91
Regulatory patterns of a large family of defensin-like genes expressed in nodules of Medicago truncatula. PLoS One (2013) 0.90
Simultaneous high-throughput recombinational cloning of open reading frames in closed and open configurations. Plant Biotechnol J (2006) 0.90
Recent advances in legume-microbe interactions: recognition, defense response, and symbiosis from a genomic perspective. Plant Physiol (2007) 0.90
Recovering from iron deficiency chlorosis in near-isogenic soybeans: a microarray study. Plant Physiol Biochem (2007) 0.89
Comparative genomic analyses in Asparagus. Genome (2005) 0.89
Comparative sequence and genetic analyses of asparagus BACs reveal no microsynteny with onion or rice. Theor Appl Genet (2006) 0.89
Grafting between model legumes demonstrates roles for roots and shoots in determining nodule type and host/rhizobia specificity. J Exp Bot (2005) 0.88
Tissue-specific PhBPBT expression is differentially regulated in response to endogenous ethylene. J Exp Bot (2008) 0.88
Analysis of tall fescue ESTs representing different abiotic stresses, tissue types and developmental stages. BMC Plant Biol (2008) 0.87
Comprehensive characterization and RNA-Seq profiling of the HD-Zip transcription factor family in soybean (Glycine max) during dehydration and salt stress. BMC Genomics (2014) 0.87
Defensin gene family in Medicago truncatula: structure, expression and induction by signal molecules. Plant Mol Biol (2005) 0.86
Genomic analysis of 16 Colorado human NL63 coronaviruses identifies a new genotype, high sequence diversity in the N-terminal domain of the spike gene and evidence of recombination. J Gen Virol (2012) 0.86
Construction, characterization, and preliminary BAC-end sequencing analysis of a bacterial artificial chromosome library of white clover (Trifolium repens L.). Genome (2007) 0.84
Biphasic gene expression changes elicited by Phakopsora pachyrhizi in soybean correlate with fungal penetration and haustoria formation. Plant Physiol (2011) 0.84
Characterization of a recombinant canine coronavirus with a distinct receptor-binding (S1) domain. Virology (2012) 0.83