Published in Genome on December 01, 2005
A genome triplication associated with early diversification of the core eudicots. Genome Biol (2012) 1.80
Insights into the Musa genome: syntenic relationships to rice and between Musa species. BMC Genomics (2008) 1.30
EST and EST-SSR marker resources for Iris. BMC Plant Biol (2009) 0.92
Networks in a large-scale phylogenetic analysis: reconstructing evolutionary history of Asparagales (Lilianae) based on four plastid genes. PLoS One (2013) 0.86
Young, intact and nested retrotransposons are abundant in the onion and asparagus genomes. Ann Bot (2013) 0.82
A Phylogenomic Assessment of Ancient Polyploidy and Genome Evolution across the Poales. Genome Biol Evol (2016) 0.80
Asparagus Spears as a Model to Study Heteroxylan Biosynthesis during Secondary Wall Development. PLoS One (2015) 0.79
Random BAC FISH of monocot plants reveals differential distribution of repetitive DNA elements in small and large chromosome species. Plant Cell Rep (2011) 0.79
Retrotransposon Proliferation Coincident with the Evolution of Dioecy in Asparagus. G3 (Bethesda) (2016) 0.75
TIGR Gene Indices clustering tools (TGICL): a software system for fast clustering of large EST datasets. Bioinformatics (2003) 12.00
Improving the Arabidopsis genome annotation using maximal transcript alignment assemblies. Nucleic Acids Res (2003) 11.03
Ancestral polyploidy in seed plants and angiosperms. Nature (2011) 7.00
American College of Rheumatology guidelines for screening, treatment, and management of lupus nephritis. Arthritis Care Res (Hoboken) (2012) 6.51
The complete genome sequence of the Arabidopsis and tomato pathogen Pseudomonas syringae pv. tomato DC3000. Proc Natl Acad Sci U S A (2003) 5.62
The Medicago genome provides insight into the evolution of rhizobial symbioses. Nature (2011) 4.94
Full-length messenger RNA sequences greatly improve genome annotation. Genome Biol (2002) 4.90
Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. Proc Natl Acad Sci U S A (2003) 4.70
Sequencing Medicago truncatula expressed sequenced tags using 454 Life Sciences technology. BMC Genomics (2006) 4.54
The intracellular sensor NLRP3 mediates key innate and healing responses to influenza A virus via the regulation of caspase-1. Immunity (2009) 4.51
Analysis of 81 genes from 64 plastid genomes resolves relationships in angiosperms and identifies genome-scale evolutionary patterns. Proc Natl Acad Sci U S A (2007) 4.47
Development and evaluation of an Arabidopsis whole genome Affymetrix probe array. Plant J (2004) 4.30
Complete reannotation of the Arabidopsis genome: methods, tools, protocols and the final release. BMC Biol (2005) 4.18
The iPlant Collaborative: Cyberinfrastructure for Plant Biology. Front Plant Sci (2011) 4.16
The institute for genomic research Osa1 rice genome annotation database. Plant Physiol (2005) 3.96
Cross-referencing eukaryotic genomes: TIGR Orthologous Gene Alignments (TOGA). Genome Res (2002) 3.93
Addictions biology: haplotype-based analysis for 130 candidate genes on a single array. Alcohol Alcohol (2008) 3.13
The TIGR rice genome annotation resource: annotating the rice genome and creating resources for plant biologists. Nucleic Acids Res (2003) 3.12
Comparative genomics of Brassica oleracea and Arabidopsis thaliana reveal gene loss, fragmentation, and dispersal after polyploidy. Plant Cell (2006) 3.10
Annotation of the Arabidopsis genome. Plant Physiol (2003) 3.06
Methods for obtaining and analyzing whole chloroplast genome sequences. Methods Enzymol (2005) 2.86
Small cysteine-rich peptides resembling antimicrobial peptides have been under-predicted in plants. Plant J (2007) 2.71
Genetic variation in human NPY expression affects stress response and emotion. Nature (2008) 2.65
The TIGR Plant Transcript Assemblies database. Nucleic Acids Res (2006) 2.62
Legume genome evolution viewed through the Medicago truncatula and Lotus japonicus genomes. Proc Natl Acad Sci U S A (2006) 2.61
Comparison of next generation sequencing technologies for transcriptome characterization. BMC Genomics (2009) 2.60
An algorithm that improves speech intelligibility in noise for normal-hearing listeners. J Acoust Soc Am (2009) 2.52
Toward sequencing cotton (Gossypium) genomes. Plant Physiol (2007) 2.16
Transcript profiling coupled with spatial expression analyses reveals genes involved in distinct developmental stages of an arbuscular mycorrhizal symbiosis. Plant Cell (2003) 2.09
Accumulation of genome-specific transcripts, transcription factors and phytohormonal regulators during early stages of fiber cell development in allotetraploid cotton. Plant J (2006) 2.01
A population-specific HTR2B stop codon predisposes to severe impulsivity. Nature (2010) 2.00
Molecular and cytological analyses of large tracks of centromeric DNA reveal the structure and evolutionary dynamics of maize centromeres. Genetics (2003) 1.92
Selection of stem cells by using antibodies that target different CD34 epitopes yields different patterns of T-cell differentiation. Stem Cells (2006) 1.91
Three immunomarker support vector machines-based prognostic classifiers for stage IB non-small-cell lung cancer. J Clin Oncol (2009) 1.91
Genome-wide identification of nodule-specific transcripts in the model legume Medicago truncatula. Plant Physiol (2002) 1.89
Contribution of the tetrodotoxin-resistant voltage-gated sodium channel NaV1.9 to sensory transmission and nociceptive behavior. Proc Natl Acad Sci U S A (2005) 1.84
Evaluating methods for isolating total RNA and predicting the success of sequencing phylogenetically diverse plant transcriptomes. PLoS One (2012) 1.82
The 5-HT3 subtype of serotonin receptor contributes to nociceptive processing via a novel subset of myelinated and unmyelinated nociceptors. J Neurosci (2002) 1.82
Highly similar microbial communities are shared among related and trophically similar ant species. Mol Ecol (2012) 1.81
Association of substance use disorders with childhood trauma but not African genetic heritage in an African American cohort. Am J Psychiatry (2009) 1.70
An atlas of over 90,000 conserved noncoding sequences provides insight into crucifer regulatory regions. Nat Genet (2013) 1.68
Interaction of FKBP5, a stress-related gene, with childhood trauma increases the risk for attempting suicide. Neuropsychopharmacology (2010) 1.68
Speech recognition by bilateral cochlear implant users in a cocktail-party setting. J Acoust Soc Am (2009) 1.67
Large-scale transcriptome analysis in chickpea (Cicer arietinum L.), an orphan legume crop of the semi-arid tropics of Asia and Africa. Plant Biotechnol J (2011) 1.66
Phosphorus stress in common bean: root transcript and metabolic responses. Plant Physiol (2007) 1.65
Arbuscular mycorrhizal symbiosis is accompanied by local and systemic alterations in gene expression and an increase in disease resistance in the shoots. Plant J (2007) 1.64
Identification of a new functional domain in angiopoietin-like 3 (ANGPTL3) and angiopoietin-like 4 (ANGPTL4) involved in binding and inhibition of lipoprotein lipase (LPL). J Biol Chem (2009) 1.64
Active nuclear import and cytoplasmic retention of activation-induced deaminase. Nat Struct Mol Biol (2009) 1.64
Legume transcription factors: global regulators of plant development and response to the environment. Plant Physiol (2007) 1.64
A comprehensive resource of drought- and salinity- responsive ESTs for gene discovery and marker development in chickpea (Cicer arietinum L.). BMC Genomics (2009) 1.61
Subcarinal node metastasis in thoracic esophageal squamous cell carcinoma. Ann Thorac Surg (2011) 1.61
Objective measures for predicting speech intelligibility in noisy conditions based on new band-importance functions. J Acoust Soc Am (2009) 1.58
Conservation and divergence in the AGAMOUS subfamily of MADS-box genes: evidence of independent sub- and neofunctionalization events. Evol Dev (2006) 1.57
Ideal permissive hypotension to resuscitate uncontrolled hemorrhagic shock and the tolerance time in rats. Anesthesiology (2011) 1.55
EST clustering error evaluation and correction. Bioinformatics (2004) 1.54
Floral gene resources from basal angiosperms for comparative genomics research. BMC Plant Biol (2005) 1.54
Refinement of light-responsive transcript lists using rice oligonucleotide arrays: evaluation of gene-redundancy. PLoS One (2008) 1.53
Using RNA-Seq for gene identification, polymorphism detection and transcript profiling in two alfalfa genotypes with divergent cell wall composition in stems. BMC Genomics (2011) 1.52
SSWAP: A Simple Semantic Web Architecture and Protocol for semantic web services. BMC Bioinformatics (2009) 1.49
Sequence, annotation, and analysis of synteny between rice chromosome 3 and diverged grass species. Genome Res (2005) 1.48
Cannabinoid receptor 1 promotes hepatocellular carcinoma initiation and progression through multiple mechanisms. Hepatology (2015) 1.48
Novel SSR markers from BAC-end sequences, DArT arrays and a comprehensive genetic map with 1,291 marker loci for chickpea (Cicer arietinum L.). PLoS One (2011) 1.48
The complete chloroplast genome sequence of Gossypium hirsutum: organization and phylogenetic relationships to other angiosperms. BMC Genomics (2006) 1.47
Development of Arabidopsis whole-genome microarrays and their application to the discovery of binding sites for the TGA2 transcription factor in salicylic acid-treated plants. Plant J (2006) 1.47
Positive transforming growth factor-β activated kinase-1 expression has an unfavorable impact on survival in T3N1-3M0 esophageal squamous cell carcinomas. Ann Thorac Surg (2012) 1.46
A unique set of 11,008 onion expressed sequence tags reveals expressed sequence and genomic differences between the monocot orders Asparagales and Poales. Plant Cell (2003) 1.46
Prognostic relevance of Id-1 expression in patients with resectable esophageal squamous cell carcinoma. Ann Thorac Surg (2012) 1.46
Complete plastid genome sequences of Drimys, Liriodendron, and Piper: implications for the phylogenetic relationships of magnoliids. BMC Evol Biol (2006) 1.46
Analysis of BAC-end sequences (BESs) and development of BES-SSR markers for genetic mapping and hybrid purity assessment in pigeonpea (Cajanus spp.). BMC Plant Biol (2011) 1.45
Analysis of the cDNAs of hypothetical genes on Arabidopsis chromosome 2 reveals numerous transcript variants. Plant Physiol (2005) 1.44
The angiopoietin-like proteins ANGPTL3 and ANGPTL4 inhibit lipoprotein lipase activity through distinct mechanisms. J Biol Chem (2008) 1.44
Expression of floral MADS-box genes in basal angiosperms: implications for the evolution of floral regulators. Plant J (2005) 1.44
Homolog interaction during meiotic prophase I in Arabidopsis requires the SOLO DANCERS gene encoding a novel cyclin-like protein. EMBO J (2002) 1.43
Highly syntenic regions in the genomes of soybean, Medicago truncatula, and Arabidopsis thaliana. BMC Plant Biol (2005) 1.43
Estimating the number of low-income americans exposed to household air pollution from burning solid fuels. Environ Health Perspect (2014) 1.41
GABRG1 and GABRA2 as independent predictors for alcoholism in two populations. Neuropsychopharmacology (2008) 1.41
Genome-wide association identifies candidate genes that influence the human electroencephalogram. Proc Natl Acad Sci U S A (2010) 1.38
Substance-specific and shared transcription and epigenetic changes in the human hippocampus chronically exposed to cocaine and alcohol. Proc Natl Acad Sci U S A (2011) 1.38
A role for the melanocortin 4 receptor in sexual function. Proc Natl Acad Sci U S A (2002) 1.38
Sequencing and analysis of the gene-rich space of cowpea. BMC Genomics (2008) 1.36
GPIHBP1 stabilizes lipoprotein lipase and prevents its inhibition by angiopoietin-like 3 and angiopoietin-like 4. J Lipid Res (2009) 1.33
Insights into the Musa genome: syntenic relationships to rice and between Musa species. BMC Genomics (2008) 1.30
The Soybean Genome Database (SoyGD): a browser for display of duplicated, polyploid, regions and sequence tagged sites on the integrated physical and genetic maps of Glycine max. Nucleic Acids Res (2006) 1.28
Cloning and sequencing of cDNAs for hypothetical genes from chromosome 2 of Arabidopsis. Plant Physiol (2002) 1.27
Amiodarone pulmonary toxicity. Clin Chest Med (2004) 1.27
A community resource for high-throughput quantitative RT-PCR analysis of transcription factor gene expression in Medicago truncatula. Plant Methods (2008) 1.27