Published in Plant J on July 17, 2007
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Correction: High throughput approaches reveal splicing of primary microRNA transcripts and tissue specific expression of mature microRNAs in Vitis vinifera. BMC Genomics (2010) 0.99
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The genome of Theobroma cacao. Nat Genet (2010) 3.47
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Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis. Mol Biol Evol (2005) 2.18
Comparison of the transcriptomes of American chestnut (Castanea dentata) and Chinese chestnut (Castanea mollissima) in response to the chestnut blight infection. BMC Plant Biol (2009) 2.10
Within-plant signalling via volatiles overcomes vascular constraints on systemic signalling and primes responses against herbivores. Ecol Lett (2007) 1.98
The evolution of the SEPALLATA subfamily of MADS-box genes: a preangiosperm origin with multiple duplications throughout angiosperm history. Genetics (2005) 1.95
Evaluating methods for isolating total RNA and predicting the success of sequencing phylogenetically diverse plant transcriptomes. PLoS One (2012) 1.82
A genome triplication associated with early diversification of the core eudicots. Genome Biol (2012) 1.80
Conservation and divergence of microRNAs in Populus. BMC Genomics (2007) 1.78
FLOWERING LOCUS T duplication coordinates reproductive and vegetative growth in perennial poplar. Proc Natl Acad Sci U S A (2011) 1.78
RNA viruses in hymenopteran pollinators: evidence of inter-Taxa virus transmission via pollen and potential impact on non-Apis hymenopteran species. PLoS One (2010) 1.73
PlantTribes: a gene and gene family resource for comparative genomics in plants. Nucleic Acids Res (2007) 1.65
Plant defense priming against herbivores: getting ready for a different battle. Plant Physiol (2008) 1.64
Phylogeny and domain evolution in the APETALA2-like gene family. Mol Biol Evol (2005) 1.55
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Evolution of genome size and complexity in Pinus. PLoS One (2009) 1.52
Complete plastid genome sequences of Drimys, Liriodendron, and Piper: implications for the phylogenetic relationships of magnoliids. BMC Evol Biol (2006) 1.46
Mitochondrial DNA suggests at least 11 origins of parasitism in angiosperms and reveals genomic chimerism in parasitic plants. BMC Evol Biol (2007) 1.45
Lignin degradation in wood-feeding insects. Proc Natl Acad Sci U S A (2008) 1.44
Patterns of gene duplication in the plant SKP1 gene family in angiosperms: evidence for multiple mechanisms of rapid gene birth. Plant J (2007) 1.44
Priming defense genes and metabolites in hybrid poplar by the green leaf volatile cis-3-hexenyl acetate. New Phytol (2008) 1.40
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The impact of multiple protein sequence alignment on phylogenetic estimation. IEEE/ACM Trans Comput Biol Bioinform (2011) 1.31
Assembly and validation of the genome of the nonmodel basal angiosperm Amborella. Science (2013) 1.31
Insights into the Musa genome: syntenic relationships to rice and between Musa species. BMC Genomics (2008) 1.30
The cinnamyl alcohol dehydrogenase gene family in Populus: phylogeny, organization, and expression. BMC Plant Biol (2009) 1.27
Natural selection on gene function drives the evolution of LTR retrotransposon families in the rice genome. Genome Res (2008) 1.12
Highly heterogeneous rates of evolution in the SKP1 gene family in plants and animals: functional and evolutionary implications. Mol Biol Evol (2003) 1.08
Evolution of plant MADS box transcription factors: evidence for shifts in selection associated with early angiosperm diversification and concerted gene duplications. Mol Biol Evol (2009) 1.08
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The floral genome: an evolutionary history of gene duplication and shifting patterns of gene expression. Trends Plant Sci (2007) 1.03
Populus euphratica: the transcriptomic response to drought stress. Plant Mol Biol (2013) 1.02
Parallel loss of plastid introns and their maturase in the genus Cuscuta. PLoS One (2009) 1.02
Adaptive evolution of chloroplast genome structure inferred using a parametric bootstrap approach. BMC Evol Biol (2006) 0.98
Isolation of ESTs from cacao (Theobroma cacao L.) leaves treated with inducers of the defense response. Plant Cell Rep (2004) 0.97
Metagenomic profiling reveals lignocellulose degrading system in a microbial community associated with a wood-feeding beetle. PLoS One (2013) 0.95
The Amborella genome: an evolutionary reference for plant biology. Genome Biol (2008) 0.95
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A physical map for the Amborella trichopoda genome sheds light on the evolution of angiosperm genome structure. Genome Biol (2011) 0.93
Comparative transcriptomics among floral organs of the basal eudicot Eschscholzia californica as reference for floral evolutionary developmental studies. Genome Biol (2010) 0.92
Overexpression of CONSTANS homologs CO1 and CO2 fails to alter normal reproductive onset and fall bud set in woody perennial poplar. PLoS One (2012) 0.92
Genes acquired by horizontal transfer are potentially involved in the evolution of phytopathogenicity in Moniliophthora perniciosa and Moniliophthora roreri, two of the major pathogens of cacao. J Mol Evol (2009) 0.91
The plasmid genome database. Microbiology (2003) 0.91
The effect of massive gene loss following whole genome duplication on the algorithmic reconstruction of the ancestral populus diploid. Comput Syst Bioinformatics Conf (2008) 0.90
Genome and secretome analysis of the hemibiotrophic fungal pathogen, Moniliophthora roreri, which causes frosty pod rot disease of cacao: mechanisms of the biotrophic and necrotrophic phases. BMC Genomics (2014) 0.90
Phylogeny and expression profiling of CAD and CAD-like genes in hybrid Populus (P. deltoides x P. nigra): evidence from herbivore damage for subfunctionalization and functional divergence. BMC Plant Biol (2010) 0.89
Midgut transcriptome profiling of Anoplophora glabripennis, a lignocellulose degrading cerambycid beetle. BMC Genomics (2013) 0.89
Advancing data reuse in phyloinformatics using an ontology-driven Semantic Web approach. BMC Med Genomics (2013) 0.89
Comparative and phylogenomic analyses of cinnamoyl-CoA reductase and cinnamoyl-CoA-reductase-like gene family in land plants. Plant Sci (2011) 0.88
Transcriptional signatures of ancient floral developmental genetics in avocado (Persea americana; Lauraceae). Proc Natl Acad Sci U S A (2009) 0.87
Microbial community profiling to investigate transmission of bacteria between life stages of the wood-boring beetle, Anoplophora glabripennis. Microb Ecol (2009) 0.87
Chestnut resistance to the blight disease: insights from transcriptome analysis. BMC Plant Biol (2012) 0.87
Evolution of a horizontally acquired legume gene, albumin 1, in the parasitic plant Phelipanche aegyptiaca and related species. BMC Evol Biol (2013) 0.87
Evidence for oxidative stress in sugar maple stands growing on acidic, nutrient imbalanced forest soils. Oecologia (2005) 0.86
Towards improved reconstruction of ancestral gene order in angiosperm phylogeny. J Comput Biol (2009) 0.86
Comparative genomics and evolutionary analyses of the O-methyltransferase gene family in Populus. Gene (2011) 0.85
Cold stress causes rapid but differential changes in properties of plasma membrane H(+)-ATPase of camelina and rapeseed. J Plant Physiol (2013) 0.85
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Resolving ancient radiations: can complete plastid gene sets elucidate deep relationships among the tropical gingers (Zingiberales)? Ann Bot (2013) 0.83
Shotgun proteomic analysis of yeast-elicited California poppy (Eschscholzia californica) suspension cultures producing enhanced levels of benzophenanthridine alkaloids. J Proteome Res (2010) 0.81
The mitochondrial genome of Moniliophthora roreri, the frosty pod rot pathogen of cacao. Fungal Biol (2012) 0.80
Two aquaporins of Jatropha are regulated differentially during drought stress and subsequent recovery. J Plant Physiol (2013) 0.78
Why do distance limitations exist on plant-plant signaling via airborne volatiles? Plant Signal Behav (2008) 0.78
Single nucleotide polymorphism isolated from a novel EST dataset in garden asparagus (Asparagus officinalis L.). Plant Sci (2013) 0.78
Characterization of the basal angiosperm Aristolochia fimbriata: a potential experimental system for genetic studies. BMC Plant Biol (2013) 0.78
IMPACT OF GLUCOSE MANAGEMENT TEAM ON OUTCOMES OF HOSPITALIZARON IN PATIENTS WITH TYPE 2 DIABETES ADMITTED TO THE MEDICAL SERVICE. Endocr Pract (2016) 0.77
Plant-based FRET biosensor discriminates environmental zinc levels. Plant Biotechnol J (2011) 0.76
Comparison of gene order of GIGANTEA loci in yellow-poplar, monocots, and eudicots. Genome (2010) 0.75
Gene families as soft cliques with backbones: Amborella contrasted with other flowering plants. BMC Genomics (2014) 0.75
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