Published in BMC Genomics on February 25, 2011
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Characterisation of the wheat (Triticum aestivum L.) transcriptome by de novo assembly for the discovery of phosphate starvation-responsive genes: gene expression in Pi-stressed wheat. BMC Genomics (2013) 1.01
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Phosphate utilization efficiency correlates with expression of low-affinity phosphate transporters and noncoding RNA, IPS1, in barley. Plant Physiol (2011) 0.99
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MicroRNAs and their putative targets in Brassica napus seed maturation. BMC Genomics (2013) 0.94
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Differential expression of microRNAs and other small RNAs in barley between water and drought conditions. Plant Biotechnol J (2014) 0.94
High-throughput sequencing and characterization of the small RNA transcriptome reveal features of novel and conserved microRNAs in Panax ginseng. PLoS One (2012) 0.94
Characterization of phosphorus-regulated miR399 and miR827 and their isomirs in barley under phosphorus-sufficient and phosphorus-deficient conditions. BMC Plant Biol (2013) 0.94
A comprehensive genome-wide study on tissue-specific and abiotic stress-specific miRNAs in Triticum aestivum. PLoS One (2014) 0.91
Identification and characterization of microRNAs in the flag leaf and developing seed of wheat (Triticum aestivum L.). BMC Genomics (2014) 0.90
Characterization of host microRNAs that respond to DNA virus infection in a crustacean. BMC Genomics (2012) 0.90
Unique and conserved microRNAs in wheat chromosome 5D revealed by next-generation sequencing. PLoS One (2013) 0.90
Boron stress responsive microRNAs and their targets in barley. PLoS One (2013) 0.90
Identification of novel Oryza sativa miRNAs in deep sequencing-based small RNA libraries of rice infected with Rice stripe virus. PLoS One (2012) 0.89
Subgenomic analysis of microRNAs in polyploid wheat. Funct Integr Genomics (2012) 0.88
Developmentally regulated expression and complex processing of barley pri-microRNAs. BMC Genomics (2013) 0.88
Transcriptome-wide identification of R2R3-MYB transcription factors in barley with their boron responsive expression analysis. Mol Genet Genomics (2013) 0.88
A transgenic transcription factor (TaDREB3) in barley affects the expression of microRNAs and other small non-coding RNAs. PLoS One (2012) 0.86
Identification of microRNAs from Eugenia uniflora by high-throughput sequencing and bioinformatics analysis. PLoS One (2012) 0.85
Dietary RNAs: New Stories Regarding Oral Delivery. Nutrients (2015) 0.82
New wheat microRNA using whole-genome sequence. Funct Integr Genomics (2014) 0.82
Genome-Wide Identification of MicroRNAs in Leaves and the Developing Head of Four Durum Genotypes during Water Deficit Stress. PLoS One (2015) 0.81
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Identification and characterization of microRNAs in the leaf of ma bamboo (Dendrocalamus latiflorus) by deep sequencing. PLoS One (2013) 0.81
Identifying microRNAs and transcript targets in Jatropha seeds. PLoS One (2014) 0.80
The miR9863 family regulates distinct Mla alleles in barley to attenuate NLR receptor-triggered disease resistance and cell-death signaling. PLoS Genet (2014) 0.80
Identification of Rapeseed MicroRNAs Involved in Early Stage Seed Germination under Salt and Drought Stresses. Front Plant Sci (2016) 0.78
The study of a barley epigenetic regulator, HvDME, in seed development and under drought. BMC Plant Biol (2013) 0.78
Drought-inducible expression of Hv-miR827 enhances drought tolerance in transgenic barley. Funct Integr Genomics (2016) 0.78
Sequencing error correction without a reference genome. BMC Bioinformatics (2013) 0.77
Genome-wide identification and characterization of miRNAs in the hypocotyl and cotyledon of cauliflower (Brassica oleracea L. var. botrytis) seedlings. Planta (2013) 0.77
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Identification of novel miRNAs from drought tolerant rice variety Nagina 22. Sci Rep (2016) 0.75
Transcriptome-Wide Analysis of Botrytis elliptica Responsive microRNAs and Their Targets in Lilium Regale Wilson by High-Throughput Sequencing and Degradome Analysis. Front Plant Sci (2017) 0.75
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Cloning and characterization of microRNAs from wheat (Triticum aestivum L.). Genome Biol (2007) 3.02
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Comparative analysis of the small RNA transcriptomes of Pinus contorta and Oryza sativa. Genome Res (2008) 2.70
The GIGANTEA-regulated microRNA172 mediates photoperiodic flowering independent of CONSTANS in Arabidopsis. Plant Cell (2007) 2.53
Identification and characterization of new plant microRNAs using EST analysis. Cell Res (2005) 2.35
Biochemical evidence for translational repression by Arabidopsis microRNAs. Plant Cell (2009) 2.27
Comprehensive analysis of microRNA expression patterns in renal biopsies of lupus nephritis patients. Rheumatol Int (2008) 2.09
Control of cell proliferation in Arabidopsis thaliana by microRNA miR396. Development (2010) 1.93
Conservation and divergence of microRNAs in Populus. BMC Genomics (2007) 1.78
EST sequencing and phylogenetic analysis of the model grass Brachypodium distachyon. Theor Appl Genet (2006) 1.77
Characterization and expression profiles of miRNAs in rice seeds. Nucleic Acids Res (2008) 1.73
Identification of small non-coding RNAs from mitochondria and chloroplasts. Nucleic Acids Res (2006) 1.69
Biotic and abiotic stress down-regulate miR398 expression in Arabidopsis. Planta (2009) 1.68
Deep sequencing of Brachypodium small RNAs at the global genome level identifies microRNAs involved in cold stress response. BMC Genomics (2009) 1.62
The international barley sequencing consortium--at the threshold of efficient access to the barley genome. Plant Physiol (2009) 1.55
Gene content and virtual gene order of barley chromosome 1H. Plant Physiol (2009) 1.53
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Rice embryogenic calli express a unique set of microRNAs, suggesting regulatory roles of microRNAs in plant post-embryogenic development. FEBS Lett (2006) 1.47
Computational evidence for hundreds of non-conserved plant microRNAs. BMC Genomics (2005) 1.43
Novel microRNAs uncovered by deep sequencing of small RNA transcriptomes in bread wheat (Triticum aestivum L.) and Brachypodium distachyon (L.) Beauv. Funct Integr Genomics (2009) 1.39
Characterization of 43 non-protein-coding mRNA genes in Arabidopsis, including the MIR162a-derived transcripts. Plant Physiol (2006) 1.35
Large-scale identification of microRNAs from a basal eudicot (Eschscholzia californica) and conservation in flowering plants. Plant J (2007) 1.28
Bioinformatic identification and expression analysis of new microRNAs from Medicago truncatula. Biochem Biophys Res Commun (2008) 1.27
Molecular evolution of the rice miR395 gene family. Cell Res (2005) 1.24
Conserved miRNA analysis in Gossypium hirsutum through small RNA sequencing. Genomics (2009) 1.18
Intragenomic matching reveals a huge potential for miRNA-mediated regulation in plants. PLoS Comput Biol (2007) 1.16
Conserved microRNAs and their targets in model grass species Brachypodium distachyon. Planta (2009) 1.15
Identification of precursor transcripts for 6 novel miRNAs expands the diversity on the genomic organisation and expression of miRNA genes in rice. BMC Plant Biol (2008) 1.02
Data mining for miRNAs and their targets in the Triticeae. Genome (2008) 1.01
Antisense transcript and RNA processing alterations suppress instability of polyadenylated mRNA in chlamydomonas chloroplasts. Plant Cell (2004) 0.97
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A study of the role of root morphological traits in growth of barley in zinc-deficient soil. J Exp Bot (2007) 0.93
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An atlas of gene expression from seed to seed through barley development. Funct Integr Genomics (2006) 1.79
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Covering a broad dynamic range: information processing at the erythropoietin receptor. Science (2010) 1.65
Genetic and genomic tools to improve drought tolerance in wheat. J Exp Bot (2010) 1.61
The international barley sequencing consortium--at the threshold of efficient access to the barley genome. Plant Physiol (2009) 1.55
Highly parallel gene-to-BAC addressing using microarrays. Biotechniques (2011) 1.52
Large-scale analysis of the barley transcriptome based on expressed sequence tags. Plant J (2004) 1.41
The transcript composition of egg cells changes significantly following fertilization in wheat (Triticum aestivum L.). Plant J (2005) 1.38
Improvement of stress tolerance of wheat and barley by modulation of expression of DREB/CBF factors. Plant Biotechnol J (2011) 1.33
Cell-specific vacuolar calcium storage mediated by CAX1 regulates apoplastic calcium concentration, gas exchange, and plant productivity in Arabidopsis. Plant Cell (2011) 1.32
Drought responses of leaf tissues from wheat cultivars of differing drought tolerance at the metabolite level. Mol Plant (2011) 1.29
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Single nucleotide polymorphism discovery from wheat next-generation sequence data. Plant Biotechnol J (2012) 1.22
Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat. BMC Genomics (2006) 1.21
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A sequence-ready physical map of barley anchored genetically by two million single-nucleotide polymorphisms. Plant Physiol (2013) 1.17
Decreasing acetic acid accumulation by a glycerol overproducing strain of Saccharomyces cerevisiae by deleting the ALD6 aldehyde dehydrogenase gene. Yeast (2002) 1.16
Detection of two major grain yield QTL in bread wheat (Triticum aestivum L.) under heat, drought and high yield potential environments. Theor Appl Genet (2012) 1.12
Different mechanisms of adaptation to cyclic water stress in two South Australian bread wheat cultivars. J Exp Bot (2008) 1.12
BAC library resources for map-based cloning and physical map construction in barley (Hordeum vulgare L.). BMC Genomics (2011) 1.12
Comparative sequence analysis of the region harboring the hardness locus in barley and its colinear region in rice. Plant Physiol (2004) 1.11
Boron toxicity tolerance in barley through reduced expression of the multifunctional aquaporin HvNIP2;1. Plant Physiol (2010) 1.09
HvNax3--a locus controlling shoot sodium exclusion derived from wild barley (Hordeum vulgare ssp. spontaneum). Funct Integr Genomics (2010) 1.06
Identification of novel quantitative trait loci for days to ear emergence and flag leaf glaucousness in a bread wheat (Triticum aestivum L.) population adapted to southern Australian conditions. Theor Appl Genet (2011) 1.06
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Transcriptome-scale homoeolog-specific transcript assemblies of bread wheat. BMC Genomics (2012) 1.05
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An investigation of boron toxicity in barley using metabolomics. Plant Physiol (2006) 1.04
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Phosphate utilization efficiency correlates with expression of low-affinity phosphate transporters and noncoding RNA, IPS1, in barley. Plant Physiol (2011) 0.99
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Metabolite profiling reveals distinct changes in carbon and nitrogen metabolism in phosphate-deficient barley plants (Hordeum vulgare L.). Plant Cell Physiol (2008) 0.97
Whole-genome mapping of agronomic and metabolic traits to identify novel quantitative trait Loci in bread wheat grown in a water-limited environment. Plant Physiol (2013) 0.95
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A customized gene expression microarray reveals that the brittle stem phenotype fs2 of barley is attributable to a retroelement in the HvCesA4 cellulose synthase gene. Plant Physiol (2010) 0.91
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A transgenic transcription factor (TaDREB3) in barley affects the expression of microRNAs and other small non-coding RNAs. PLoS One (2012) 0.86
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