Published in Nucleic Acids Res on June 02, 2009
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A network of cancer genes with co-occurring and anti-co-occurring mutations. PLoS One (2010) 1.13
A protein domain co-occurrence network approach for predicting protein function and inferring species phylogeny. PLoS One (2011) 0.96
Revealing and avoiding bias in semantic similarity scores for protein pairs. BMC Bioinformatics (2010) 0.95
DaGO-Fun: tool for Gene Ontology-based functional analysis using term information content measures. BMC Bioinformatics (2013) 0.94
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Three-level prediction of protein function by combining profile-sequence search, profile-profile search, and domain co-occurrence networks. BMC Bioinformatics (2013) 0.92
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New resources for functional analysis of omics data for the genus Aspergillus. BMC Genomics (2011) 0.89
Techniques for transferring host-pathogen protein interactions knowledge to new tasks. Front Microbiol (2015) 0.84
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Inferring potential microRNA-microRNA associations based on targeting propensity and connectivity in the context of protein interaction network. PLoS One (2013) 0.83
Deciphering the association between gene function and spatial gene-gene interactions in 3D human genome conformation. BMC Genomics (2015) 0.81
A novel function prediction approach using protein overlap networks. BMC Syst Biol (2013) 0.81
Categorizer: a tool to categorize genes into user-defined biological groups based on semantic similarity. BMC Genomics (2014) 0.78
Rebelling for a reason: protein structural "outliers". PLoS One (2013) 0.78
Lithium-responsive genes and gene networks in bipolar disorder patient-derived lymphoblastoid cell lines. Pharmacogenomics J (2016) 0.77
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Prediction of Intra-Species Protein-Protein Interactions in Enteropathogens Facilitating Systems Biology Study. PLoS One (2015) 0.75
A graph modification approach for finding core-periphery structures in protein interaction networks. Algorithms Mol Biol (2015) 0.75
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A new method to measure the semantic similarity of GO terms. Bioinformatics (2007) 5.91
Correlation between gene expression and GO semantic similarity. IEEE/ACM Trans Comput Biol Bioinform (2006) 2.53
A graph-theoretic modeling on GO space for biological interpretation of gene clusters. Bioinformatics (2004) 1.57
A draft sequence of the rice genome (Oryza sativa L. ssp. indica). Science (2002) 42.78
Tet-mediated formation of 5-carboxylcytosine and its excision by TDG in mammalian DNA. Science (2011) 13.16
Intestinal microbiota metabolism of L-carnitine, a nutrient in red meat, promotes atherosclerosis. Nat Med (2013) 9.44
Cell-free formation of RNA granules: low complexity sequence domains form dynamic fibers within hydrogels. Cell (2012) 6.83
A new method to measure the semantic similarity of GO terms. Bioinformatics (2007) 5.91
Rapid synthesis of auxin via a new tryptophan-dependent pathway is required for shade avoidance in plants. Cell (2008) 5.55
Autocrine TNFalpha signaling renders human cancer cells susceptible to Smac-mimetic-induced apoptosis. Cancer Cell (2007) 5.09
Regulation of PTEN by Rho small GTPases. Nat Cell Biol (2005) 4.51
Rat Genome Database (RGD): mapping disease onto the genome. Nucleic Acids Res (2002) 4.04
Whole-genome and whole-exome sequencing of bladder cancer identifies frequent alterations in genes involved in sister chromatid cohesion and segregation. Nat Genet (2013) 3.87
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Comparative recombination rates in the rat, mouse, and human genomes. Genome Res (2004) 3.50
A simple genetic architecture underlies morphological variation in dogs. PLoS Biol (2010) 3.46
Genome-wide profiling of 5-formylcytosine reveals its roles in epigenetic priming. Cell (2013) 3.13
The Rat Genome Database (RGD): developments towards a phenome database. Nucleic Acids Res (2005) 2.77
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Modular organization of protein interaction networks. Bioinformatics (2006) 2.68
Comparison of quantitative perfusion imaging using arterial spin labeling at 1.5 and 4.0 Tesla. Magn Reson Med (2002) 2.43
Four SNPs on chromosome 9p21 in a South Korean population implicate a genetic locus that confers high cross-race risk for development of coronary artery disease. Arterioscler Thromb Vasc Biol (2007) 2.38
Premature myocardial infarction novel susceptibility locus on chromosome 1P34-36 identified by genomewide linkage analysis. Am J Hum Genet (2004) 2.36
Arterial spin labeling perfusion fMRI with very low task frequency. Magn Reson Med (2003) 2.29
Electrically pumped waveguide lasing from ZnO nanowires. Nat Nanotechnol (2011) 2.17
5-year urinary and sexual outcomes after radical prostatectomy: results from the Prostate Cancer Outcomes Study. J Urol (2008) 2.16
Ulcerative colitis is a disease of accelerated colon aging: evidence from telomere attrition and DNA damage. Gastroenterology (2008) 2.14
Whole-genome sequencing identifies recurrent mutations in hepatocellular carcinoma. Genome Res (2013) 2.12
Hepatitis B knowledge and practices among Chinese immigrants to the United States. Asian Pac J Cancer Prev (2006) 1.91
Promoting culturally appropriate colorectal cancer screening through a health educator: a randomized controlled trial. Cancer (2006) 1.90
Nuclear Dvl, c-Jun, beta-catenin, and TCF form a complex leading to stabilization of beta-catenin-TCF interaction. J Cell Biol (2008) 1.89
Sclerosing angiomatoid nodular transformation (SANT) of the spleen: addition of a case with focal CD68 staining and distinctive CT features. Am J Surg Pathol (2005) 1.88
Association between four SNPs on chromosome 9p21 and myocardial infarction is replicated in an Italian population. J Hum Genet (2007) 1.87
Optical virtual imaging at 50 nm lateral resolution with a white-light nanoscope. Nat Commun (2011) 1.85
Wnt3a-mediated formation of phosphatidylinositol 4,5-bisphosphate regulates LRP6 phosphorylation. Science (2008) 1.81
The LRP5 high-bone-mass G171V mutation disrupts LRP5 interaction with Mesd. Mol Cell Biol (2004) 1.77
Cruciferous vegetable feeding alters UGT1A1 activity: diet- and genotype-dependent changes in serum bilirubin in a controlled feeding trial. Cancer Prev Res (Phila) (2009) 1.76
Genomic signature and mutation trend analysis of pandemic (H1N1) 2009 influenza A virus. PLoS One (2010) 1.75
A microarray analysis of the rice transcriptome and its comparison to Arabidopsis. Genome Res (2005) 1.71
MILES: multiple-instance learning via embedded instance selection. IEEE Trans Pattern Anal Mach Intell (2006) 1.71
Pathogen blocks host death receptor signalling by arginine GlcNAcylation of death domains. Nature (2013) 1.70
Mutation in nuclear pore component NUP155 leads to atrial fibrillation and early sudden cardiac death. Cell (2008) 1.70
Prevalence and evolution of drug resistance HIV-1 variants in Henan, China. Cell Res (2005) 1.64
Up-regulation of phosphorylated/activated p70 S6 kinase and its relationship to neurofibrillary pathology in Alzheimer's disease. Am J Pathol (2003) 1.64
Proinflammatory mediators modulate the heat-activated ion channel TRPV1 via the scaffolding protein AKAP79/150. Neuron (2008) 1.61
Clathrin and phosphatidylinositol-4,5-bisphosphate regulate autophagic lysosome reformation. Nat Cell Biol (2012) 1.60
A graph-based approach to systematically reconstruct human transcriptional regulatory modules. Bioinformatics (2007) 1.59
Further results on the risk of nonfatal venous thromboembolism in users of the contraceptive transdermal patch compared to users of oral contraceptives containing norgestimate and 35 microg of ethinyl estradiol. Contraception (2007) 1.57
Whole exome sequencing of insulinoma reveals recurrent T372R mutations in YY1. Nat Commun (2013) 1.57
Antibody microarray profiling reveals individual and combined serum proteins associated with pancreatic cancer. Cancer Res (2005) 1.55
Hepatitis B awareness, testing, and knowledge among Vietnamese American men and women. J Community Health (2005) 1.55
Occurrence of autoantibodies to annexin I, 14-3-3 theta and LAMR1 in prediagnostic lung cancer sera. J Clin Oncol (2008) 1.55
Peste des petits ruminants virus in Tibet, China. Emerg Infect Dis (2009) 1.54
Optimizing radiolabeled engineered anti-p185HER2 antibody fragments for in vivo imaging. Cancer Res (2005) 1.54
Association studies of variants in MEIS1, BTBD9, and MAP2K5/SKOR1 with restless legs syndrome in a US population. Sleep Med (2011) 1.53
Chromatin immunoprecipitation: a tool for studying histone acetylation and transcription factor binding. Methods (2003) 1.53
Polymorphisms, mutations, and amplification of the EGFR gene in non-small cell lung cancers. PLoS Med (2007) 1.52
Complete genome sequence of Bacillus thuringiensis mutant strain BMB171. J Bacteriol (2010) 1.52
Patient safety education for undergraduate medical students: a systematic review. BMC Med Educ (2011) 1.51
SST: an algorithm for finding near-exact sequence matches in time proportional to the logarithm of the database size. Bioinformatics (2002) 1.50
Zinc-finger-nucleases mediate specific and efficient excision of HIV-1 proviral DNA from infected and latently infected human T cells. Nucleic Acids Res (2013) 1.48
An LRP8 variant is associated with familial and premature coronary artery disease and myocardial infarction. Am J Hum Genet (2007) 1.48
Correlates of hepatitis B testing among Chinese Americans. J Community Health (2007) 1.48
Hepatitis B knowledge, testing and vaccination levels in Chinese immigrants to British Columbia, Canada. Can J Public Health (2007) 1.48
Over-expressing transient receptor potential cation channel 6 in podocytes induces cytoskeleton rearrangement through increases of intracellular Ca2+ and RhoA activation. Exp Biol Med (Maywood) (2011) 1.47
Histone H4 Lys 20 monomethylation by histone methylase SET8 mediates Wnt target gene activation. Proc Natl Acad Sci U S A (2011) 1.46
Genome-wide discovery and characterization of maize long non-coding RNAs. Genome Biol (2014) 1.45
Indinavir resistance evolution in one human immunodeficiency virus type 1 infected patient revealed by single-genome amplification. Virol Sin (2010) 1.43
Identification of a novel GPR143 mutation in a large Chinese family with congenital nystagmus as the most prominent and consistent manifestation. J Hum Genet (2007) 1.42
Identification of a novel HIV type 1 circulating recombinant form (CRF52_01B) in Southeast Asia. AIDS Res Hum Retroviruses (2012) 1.42
Chitosan-functionalized graphene oxide as a nanocarrier for drug and gene delivery. Small (2011) 1.41
In vivo phosphorylation site mapping in mouse cardiac troponin I by high resolution top-down electron capture dissociation mass spectrometry: Ser22/23 are the only sites basally phosphorylated. Biochemistry (2009) 1.41
Genetic deficiency of glycogen synthase kinase-3beta corrects diabetes in mouse models of insulin resistance. PLoS Biol (2008) 1.40
Community-wide assessment of protein-interface modeling suggests improvements to design methodology. J Mol Biol (2011) 1.40
Efavirenz versus boosted atazanavir or zidovudine and abacavir in antiretroviral treatment-naive, HIV-infected subjects: week 48 data from the Altair study. Clin Infect Dis (2010) 1.39
Plasma soluble corin in patients with heart failure. Circ Heart Fail (2010) 1.36
Glycosylation variants of mucins and CEACAMs as candidate biomarkers for the diagnosis of pancreatic cystic neoplasms. Ann Surg (2010) 1.35
The potential use of gingival crevicular blood for measuring glucose to screen for diabetes: an examination based on characteristics of the blood collection site. J Periodontol (2009) 1.35
Real-time computerized annotation of pictures. IEEE Trans Pattern Anal Mach Intell (2008) 1.34
Spatio-temporal dynamics of global H5N1 outbreaks match bird migration patterns. Geospat Health (2009) 1.34
Genome-wide association analysis for multiple continuous secondary phenotypes. Am J Hum Genet (2013) 1.29
Behavioural study of the D-galactose induced aging model in C57BL/6J mice. Behav Brain Res (2005) 1.28
Entry of newly synthesized GLUT4 into the insulin-responsive storage compartment is GGA dependent. EMBO J (2004) 1.28
Multiple mechanisms for Wnt11-mediated repression of the canonical Wnt signaling pathway. J Biol Chem (2004) 1.27
A diterpenoid derivative 15-oxospiramilactone inhibits Wnt/β-catenin signaling and colon cancer cell tumorigenesis. Cell Res (2011) 1.27
The Arabidopsis mediator subunit MED25 differentially regulates jasmonate and abscisic acid signaling through interacting with the MYC2 and ABI5 transcription factors. Plant Cell (2012) 1.27
Dual-time point PET/CT with F-18 FDG for the differentiation of malignant and benign bone lesions. Skeletal Radiol (2009) 1.27
Cessation assistance reported by smokers in 15 countries participating in the International Tobacco Control (ITC) policy evaluation surveys. Addiction (2012) 1.25
Covalent disulfide-linked anti-CEA diabody allows site-specific conjugation and radiolabeling for tumor targeting applications. Protein Eng Des Sel (2004) 1.25
Association between deletion size and important phenotypes expands the genomic region of interest in Phelan-McDermid syndrome (22q13 deletion syndrome). J Med Genet (2011) 1.23
Ulcerative colitis-associated colorectal cancer arises in a field of short telomeres, senescence, and inflammation. Cancer Res (2011) 1.23
Genetic analysis and characterization of a new maize association mapping panel for quantitative trait loci dissection. Theor Appl Genet (2010) 1.23
Effects of probiotics on nonalcoholic fatty liver disease: a meta-analysis. World J Gastroenterol (2013) 1.22
FOXC1, a target of polycomb, inhibits metastasis of breast cancer cells. Breast Cancer Res Treat (2011) 1.22
A multiparametric panel for ovarian cancer diagnosis, prognosis, and response to chemotherapy. Clin Cancer Res (2007) 1.22
SOX7, down-regulated in colorectal cancer, induces apoptosis and inhibits proliferation of colorectal cancer cells. Cancer Lett (2008) 1.22
Genome-wide linkage scan identifies a novel genetic locus on chromosome 5p13 for neonatal atrial fibrillation associated with sudden death and variable cardiomyopathy. Circulation (2004) 1.21
Caprin-2 enhances canonical Wnt signaling through regulating LRP5/6 phosphorylation. J Cell Biol (2008) 1.21
Evaluation of a cervical cancer control intervention using lay health workers for Vietnamese American women. Am J Public Health (2010) 1.20
Application of a methylation gene panel by quantitative PCR for lung cancers. Cancer Lett (2006) 1.19
Epidemiology of immune thrombocytopenic purpura in the General Practice Research Database. Br J Haematol (2009) 1.19
A modern ampelography: a genetic basis for leaf shape and venation patterning in grape. Plant Physiol (2013) 1.19