Published in BMC Proc on December 15, 2009
Analysing biological pathways in genome-wide association studies. Nat Rev Genet (2010) 6.63
Pathway analysis of genomic data: concepts, methods, and prospects for future development. Trends Genet (2012) 1.86
Common variants conferring risk of schizophrenia: a pathway analysis of GWAS data. Schizophr Res (2010) 1.79
Patterns of positive selection in seven ant genomes. Mol Biol Evol (2014) 1.08
Inclusion of a priori information in genome-wide association analysis. Genet Epidemiol (2009) 1.06
Assessing methods for assigning SNPs to genes in gene-based tests of association using common variants. PLoS One (2013) 1.06
The statistical properties of gene-set analysis. Nat Rev Genet (2016) 1.04
Comparison of methods for competitive tests of pathway analysis. PLoS One (2012) 1.03
Comparison of pathway analysis approaches using lung cancer GWAS data sets. PLoS One (2012) 1.00
Evaluating methods for combining rare variant data in pathway-based tests of genetic association. BMC Proc (2011) 0.99
Widespread signals of convergent adaptation to high altitude in Asia and america. Am J Hum Genet (2014) 0.92
A method for gene-based pathway analysis using genomewide association study summary statistics reveals nine new type 1 diabetes associations. Genet Epidemiol (2014) 0.89
Pathway-based analysis of a melanoma genome-wide association study: analysis of genes related to tumour-immunosuppression. PLoS One (2011) 0.88
Pathway analysis using information from allele-specific gene methylation in genome-wide association studies for bipolar disorder. PLoS One (2013) 0.83
Detection of convergent genome-wide signals of adaptation to tropical forests in humans. PLoS One (2015) 0.79
META-GSA: Combining Findings from Gene-Set Analyses across Several Genome-Wide Association Studies. PLoS One (2015) 0.77
Changes in selective pressures associated with human population expansion may explain metabolic and immune related pathways enriched for signatures of positive selection. BMC Genomics (2016) 0.76
Incorporating Information of microRNAs into Pathway Analysis in a Genome-Wide Association Study of Bipolar Disorder. Front Genet (2012) 0.76
Detection of pathways affected by positive selection in primate lineages ancestral to humans. Mol Biol Evol (2017) 0.75
Independent introductions and admixtures have contributed to adaptation of European maize and its American counterparts. PLoS Genet (2017) 0.75
Gene set enrichment analysis: a knowledge-based approach for interpreting genome-wide expression profiles. Proc Natl Acad Sci U S A (2005) 167.46
PGC-1alpha-responsive genes involved in oxidative phosphorylation are coordinately downregulated in human diabetes. Nat Genet (2003) 53.59
Ontological analysis of gene expression data: current tools, limitations, and open problems. Bioinformatics (2005) 22.22
Ensembl 2008. Nucleic Acids Res (2007) 20.67
Microarray data analysis: from disarray to consolidation and consensus. Nat Rev Genet (2006) 16.12
Pathway-based approaches for analysis of genomewide association studies. Am J Hum Genet (2007) 12.27
Analyzing gene expression data in terms of gene sets: methodological issues. Bioinformatics (2007) 9.87
Discovering statistically significant pathways in expression profiling studies. Proc Natl Acad Sci U S A (2005) 8.75
Gene-set approach for expression pattern analysis. Brief Bioinform (2008) 4.58
Improving gene set analysis of microarray data by SAM-GS. BMC Bioinformatics (2007) 3.68
On the utility of gene set methods in genomewide association studies of quantitative traits. Genet Epidemiol (2008) 2.12
Successful design and conduct of genome-wide association studies. Hum Mol Genet (2007) 1.55
Identification of differentially expressed gene categories in microarray studies using nonparametric multivariate analysis. Bioinformatics (2007) 1.33
Gene set analyses for interpreting microarray experiments on prokaryotic organisms. BMC Bioinformatics (2008) 1.11
Incorporating duplicate genotype data into linear trend tests of genetic association: methods and cost-effectiveness. Stat Appl Genet Mol Biol (2009) 0.89
Evaluating incremental values from new predictors with net reclassification improvement in survival analysis. Lifetime Data Anal (2012) 0.81