Published in Proc Natl Acad Sci U S A on December 17, 2009
Antibiotic resistance is ancient. Nature (2011) 4.83
Applications of next generation sequencing in molecular ecology of non-model organisms. Heredity (Edinb) (2010) 3.22
Detection of a diverse marine fish fauna using environmental DNA from seawater samples. PLoS One (2012) 2.75
Species-specific responses of Late Quaternary megafauna to climate and humans. Nature (2011) 2.60
True single-molecule DNA sequencing of a pleistocene horse bone. Genome Res (2011) 1.88
Fifty thousand years of Arctic vegetation and megafaunal diet. Nature (2014) 1.78
Deep sequencing of plant and animal DNA contained within traditional Chinese medicines reveals legality issues and health safety concerns. PLoS Genet (2012) 1.68
Ancient DNA analyses exclude humans as the driving force behind late Pleistocene musk ox (Ovibos moschatus) population dynamics. Proc Natl Acad Sci U S A (2010) 1.55
Investigating the potential use of environmental DNA (eDNA) for genetic monitoring of marine mammals. PLoS One (2012) 1.51
Postglacial viability and colonization in North America's ice-free corridor. Nature (2016) 1.26
Ancient DNA from lake sediments: bridging the gap between paleoecology and genetics. BMC Evol Biol (2011) 1.24
Ancient and modern environmental DNA. Philos Trans R Soc Lond B Biol Sci (2015) 1.16
The ghosts of mammals past: biological and geographical patterns of global mammalian extinction across the Holocene. Philos Trans R Soc Lond B Biol Sci (2011) 1.12
Proxy comparison in ancient peat sediments: pollen, macrofossil and plant DNA. Philos Trans R Soc Lond B Biol Sci (2015) 1.10
Diversity lost: are all Holarctic large mammal species just relict populations? BMC Biol (2010) 0.97
A Geographic Assessment of the Global Scope for Rewilding with Wild-Living Horses (Equus ferus). PLoS One (2015) 0.92
Seasonal variation in environmental DNA in relation to population size and environmental factors. Sci Rep (2017) 0.90
Life and extinction of megafauna in the ice-age Arctic. Proc Natl Acad Sci U S A (2015) 0.90
The Evolutionary Origin and Genetic Makeup of Domestic Horses. Genetics (2016) 0.87
Pattern of extinction of the woolly mammoth in Beringia. Nat Commun (2012) 0.87
Evaluating a multigene environmental DNA approach for biodiversity assessment. Gigascience (2015) 0.85
Optimization of DNA recovery and amplification from non-carbonized archaeobotanical remains. PLoS One (2014) 0.82
High potential for using DNA from ancient herring bones to inform modern fisheries management and conservation. PLoS One (2012) 0.81
Toward high-resolution population genomics using archaeological samples. DNA Res (2016) 0.79
Horizontal transfer of short and degraded DNA has evolutionary implications for microbes and eukaryotic sexual reproduction. Bioessays (2014) 0.79
Scrapheap challenge: a novel bulk-bone metabarcoding method to investigate ancient DNA in faunal assemblages. Sci Rep (2013) 0.78
Timing and causes of mid-Holocene mammoth extinction on St. Paul Island, Alaska. Proc Natl Acad Sci U S A (2016) 0.77
Combined hybridization capture and shotgun sequencing for ancient DNA analysis of extinct wild and domestic dromedary camel. Mol Ecol Resour (2016) 0.77
History in a single hair. EMBO Rep (2010) 0.75
Is the detection of aquatic environmental DNA influenced by substrate type? PLoS One (2017) 0.75
Ancient oncogenesis, infection and human evolution. Evol Appl (2017) 0.75
Detecting taxonomic and phylogenetic signals in equid cheek teeth: towards new palaeontological and archaeological proxies. R Soc Open Sci (2017) 0.75
Evidence for an extraterrestrial impact 12,900 years ago that contributed to the megafaunal extinctions and the Younger Dryas cooling. Proc Natl Acad Sci U S A (2007) 9.61
The late Pleistocene dispersal of modern humans in the Americas. Science (2008) 5.51
Species detection using environmental DNA from water samples. Biol Lett (2008) 4.96
Fifty millennia of catastrophic extinctions after human contact. Trends Ecol Evol (2005) 4.85
Ancient DNA. Proc Biol Sci (2005) 4.84
Diverse plant and animal genetic records from Holocene and Pleistocene sediments. Science (2003) 4.48
High-resolution Greenland ice core data show abrupt climate change happens in few years. Science (2008) 4.22
DNA from pre-Clovis human coprolites in Oregon, North America. Science (2008) 3.92
Ancient biomolecules from deep ice cores reveal a forested southern Greenland. Science (2007) 3.79
Nanodiamonds in the Younger Dryas boundary sediment layer. Science (2009) 3.69
Pleistocene to Holocene extinction dynamics in giant deer and woolly mammoth. Nature (2004) 3.55
Whole-genome shotgun sequencing of mitochondria from ancient hair shafts. Science (2007) 2.85
Monte Verde: seaweed, food, medicine, and the peopling of South America. Science (2008) 2.68
Climate change, humans, and the extinction of the woolly mammoth. PLoS Biol (2008) 2.64
New carbon dates link climatic change with human colonization and Pleistocene extinctions. Nature (2006) 2.54
Isolation of nucleic acids and cultures from fossil ice and permafrost. Trends Ecol Evol (2004) 2.53
Radiocarbon evidence of mid-Holocene mammoths stranded on an Alaskan Bering Sea island. Nature (2004) 2.31
Statistical assignment of DNA sequences using Bayesian phylogenetics. Syst Biol (2008) 2.13
Diversity of Holocene life forms in fossil glacier ice. Proc Natl Acad Sci U S A (1999) 1.82
Ancient bacteria show evidence of DNA repair. Proc Natl Acad Sci U S A (2007) 1.81
Molecular caving. Curr Biol (2003) 1.73
Long-term persistence of bacterial DNA. Curr Biol (2004) 1.70
Out of America: ancient DNA evidence for a new world origin of late quaternary woolly mammoths. Curr Biol (2008) 1.49
Genetic structure and extinction of the woolly mammoth, Mammuthus primigenius. Curr Biol (2007) 1.47
Ancient DNA chronology within sediment deposits: are paleobiological reconstructions possible and is DNA leaching a factor? Mol Biol Evol (2007) 1.44
Crosslinks rather than strand breaks determine access to ancient DNA sequences from frozen sediments. Genetics (2006) 1.44
Fast phylogenetic DNA barcoding. Philos Trans R Soc Lond B Biol Sci (2008) 1.27
Beringian paleoecology inferred from permafrost-preserved fungal DNA. Appl Environ Microbiol (2005) 1.22
On the Pleistocene extinctions of Alaskan mammoths and horses. Proc Natl Acad Sci U S A (2006) 1.04
The diploid genome sequence of an Asian individual. Nature (2008) 46.29
Evolution of genes and genomes on the Drosophila phylogeny. Nature (2007) 18.01
Evolutionary and biomedical insights from the rhesus macaque genome. Science (2007) 16.21
The sequence and de novo assembly of the giant panda genome. Nature (2009) 15.76
The Future of Family Medicine: a collaborative project of the family medicine community. Ann Fam Med (2004) 13.84
A metagenome-wide association study of gut microbiota in type 2 diabetes. Nature (2012) 11.68
Sequencing of 50 human exomes reveals adaptation to high altitude. Science (2010) 11.27
Bayes empirical bayes inference of amino acid sites under positive selection. Mol Biol Evol (2005) 11.26
Natural selection on protein-coding genes in the human genome. Nature (2005) 10.84
Clinical guidelines for the use of chronic opioid therapy in chronic noncancer pain. J Pain (2009) 9.36
Inferring nonneutral evolution from human-chimp-mouse orthologous gene trios. Science (2003) 9.20
The use of coded PCR primers enables high-throughput sequencing of multiple homolog amplification products by 454 parallel sequencing. PLoS One (2007) 9.17
Assessing the evolutionary impact of amino acid mutations in the human genome. PLoS Genet (2008) 8.92
Evaluation of an improved branch-site likelihood method for detecting positive selection at the molecular level. Mol Biol Evol (2005) 8.74
Comparative genome sequencing of Drosophila pseudoobscura: chromosomal, gene, and cis-element evolution. Genome Res (2005) 8.38
Metagenomics to paleogenomics: large-scale sequencing of mammoth DNA. Science (2005) 8.14
Rise and fall of the Beringian steppe bison. Science (2004) 7.91
Multilocus methods for estimating population sizes, migration rates and divergence time, with applications to the divergence of Drosophila pseudoobscura and D. persimilis. Genetics (2004) 7.79
Ancient human genome sequence of an extinct Palaeo-Eskimo. Nature (2010) 7.51
Codon-substitution models for detecting molecular adaptation at individual sites along specific lineages. Mol Biol Evol (2002) 7.21
The evolution of gene expression levels in mammalian organs. Nature (2011) 7.16
Worldwide phylogeography of wild boar reveals multiple centers of pig domestication. Science (2005) 6.92
Primary forests are irreplaceable for sustaining tropical biodiversity. Nature (2011) 6.85
Time dependency of molecular rate estimates and systematic overestimation of recent divergence times. Mol Biol Evol (2005) 6.77
Ascertainment bias in studies of human genome-wide polymorphism. Genome Res (2005) 6.63
Proportionally more deleterious genetic variation in European than in African populations. Nature (2008) 6.61
Southeast Asian biodiversity: an impending disaster. Trends Ecol Evol (2004) 6.11
Simultaneous inference of selection and population growth from patterns of variation in the human genome. Proc Natl Acad Sci U S A (2005) 5.94
Integration within the Felsenstein equation for improved Markov chain Monte Carlo methods in population genetics. Proc Natl Acad Sci U S A (2007) 5.64
Resequencing of 200 human exomes identifies an excess of low-frequency non-synonymous coding variants. Nat Genet (2010) 5.44
Power and limitations of the chloroplast trnL (UAA) intron for plant DNA barcoding. Nucleic Acids Res (2006) 5.31
Localizing recent adaptive evolution in the human genome. PLoS Genet (2007) 5.11
Direct evidence of extensive diversity of HIV-1 in Kinshasa by 1960. Nature (2008) 5.05
Ancient DNA. Proc Biol Sci (2005) 4.84
Resequencing 50 accessions of cultivated and wild rice yields markers for identifying agronomically important genes. Nat Biotechnol (2011) 4.84
An Aboriginal Australian genome reveals separate human dispersals into Asia. Science (2011) 4.84
Recharacterization of ancient DNA miscoding lesions: insights in the era of sequencing-by-synthesis. Nucleic Acids Res (2006) 4.70
Patterns of positive selection in six Mammalian genomes. PLoS Genet (2008) 4.69
Diverse plant and animal genetic records from Holocene and Pleistocene sediments. Science (2003) 4.48
Ancient DNA from European early neolithic farmers reveals their near eastern affinities. PLoS Biol (2010) 4.43
Early allelic selection in maize as revealed by ancient DNA. Science (2003) 4.38
Most species are not driven to extinction before genetic factors impact them. Proc Natl Acad Sci U S A (2004) 4.34
Accuracy and power of statistical methods for detecting adaptive evolution in protein coding sequences and for identifying positively selected sites. Genetics (2004) 4.22
Insights into hominid evolution from the gorilla genome sequence. Nature (2012) 4.12
DNA from pre-Clovis human coprolites in Oregon, North America. Science (2008) 3.92
Effect of recombination on the accuracy of the likelihood method for detecting positive selection at amino acid sites. Genetics (2003) 3.89
Genome-wide patterns of nucleotide polymorphism in domesticated rice. PLoS Genet (2007) 3.83
Origins and genetic legacy of Neolithic farmers and hunter-gatherers in Europe. Science (2012) 3.82
The cost of inbreeding in Arabidopsis. Nature (2002) 3.80
Ancient biomolecules from deep ice cores reveal a forested southern Greenland. Science (2007) 3.79
Multiplex amplification of the mammoth mitochondrial genome and the evolution of Elephantidae. Nature (2005) 3.74
Tackling NCDs: a different approach is needed. Lancet (2011) 3.54
Linkage disequilibrium as a signature of selective sweeps. Genetics (2004) 3.52
Monitoring endangered freshwater biodiversity using environmental DNA. Mol Ecol (2011) 3.45
Ancient DNA, pig domestication, and the spread of the Neolithic into Europe. Proc Natl Acad Sci U S A (2007) 3.45
Recalibrating Equus evolution using the genome sequence of an early Middle Pleistocene horse. Nature (2013) 3.45
Ancient DNA reveals lack of continuity between neolithic hunter-gatherers and contemporary Scandinavians. Curr Biol (2009) 3.42
Pervasive adaptive evolution in mammalian fertilization proteins. Mol Biol Evol (2003) 3.42
Novel high-resolution characterization of ancient DNA reveals C > U-type base modification events as the sole cause of post mortem miscoding lesions. Nucleic Acids Res (2007) 3.41
Architecture of the RNA polymerase II-TFIIF complex revealed by cross-linking and mass spectrometry. EMBO J (2010) 3.40
Assessing ancient DNA studies. Trends Ecol Evol (2005) 3.37
Refugia revisited: individualistic responses of species in space and time. Proc Biol Sci (2009) 3.33
Mitochondrial genomes reveal an explosive radiation of extinct and extant bears near the Miocene-Pliocene boundary. BMC Evol Biol (2008) 3.21
Stochastic mapping of morphological characters. Syst Biol (2003) 3.08
Sequencing ancient calcified dental plaque shows changes in oral microbiota with dietary shifts of the Neolithic and Industrial revolutions. Nat Genet (2013) 3.03
Great ape genetic diversity and population history. Nature (2013) 2.95
Whole-genome shotgun sequencing of mitochondria from ancient hair shafts. Science (2007) 2.85
New ages for human occupation and climatic change at Lake Mungo, Australia. Nature (2003) 2.84
Time-dependent rates of molecular evolution. Mol Ecol (2011) 2.82
Family practice in the United States: a status report. JAMA (2002) 2.77
Absence of Yersinia pestis-specific DNA in human teeth from five European excavations of putative plague victims. Microbiology (2004) 2.75
Detection of a diverse marine fish fauna using environmental DNA from seawater samples. PLoS One (2012) 2.75
The aftermath of megafaunal extinction: ecosystem transformation in Pleistocene Australia. Science (2012) 2.69
Complete resequencing of 40 genomes reveals domestication events and genes in silkworm (Bombyx). Science (2009) 2.68
Genomic affinities of two 7,000-year-old Iberian hunter-gatherers. Curr Biol (2012) 2.67
A Gondwanan origin of passerine birds supported by DNA sequences of the endemic New Zealand wrens. Proc Biol Sci (2002) 2.63
Demographic histories and patterns of linkage disequilibrium in Chinese and Indian rhesus macaques. Science (2007) 2.62
Characterization of genetic miscoding lesions caused by postmortem damage. Am J Hum Genet (2002) 2.61