Advanced level-set-based cell tracking in time-lapse fluorescence microscopy.

A benchmark for comparison of cell tracking algorithms. Bioinformatics (2014) 1.32

A flexible and robust approach for segmenting cell nuclei from 2D microscopy images using supervised learning and template matching. Cytometry A (2013) 1.23

Automatic extraction of nuclei centroids of mouse embryonic cells from fluorescence microscopy images. PLoS One (2012) 1.04

Robust Nucleus/Cell Detection and Segmentation in Digital Pathology and Microscopy Images: A Comprehensive Review. IEEE Rev Biomed Eng (2016) 0.99

Chapter 17: bioimage informatics for systems pharmacology. PLoS Comput Biol (2013) 0.95

Survey statistics of automated segmentations applied to optical imaging of mammalian cells. BMC Bioinformatics (2015) 0.86

Global linking of cell tracks using the viterbi algorithm. IEEE Trans Med Imaging (2014) 0.85

Automated profiling of individual cell-cell interactions from high-throughput time-lapse imaging microscopy in nanowell grids (TIMING). Bioinformatics (2015) 0.83

The study of muscle remodeling in Drosophila metamorphosis using in vivo microscopy and bioimage informatics. BMC Bioinformatics (2012) 0.83

Region-based progressive localization of cell nuclei in microscopic images with data adaptive modeling. BMC Bioinformatics (2013) 0.83

Image-based characterization of thrombus formation in time-lapse DIC microscopy. Med Image Anal (2012) 0.82

An efficient, scalable, and adaptable framework for solving generic systems of level-set PDEs. Front Neuroinform (2013) 0.80

Improved and robust detection of cell nuclei from four dimensional fluorescence images. PLoS One (2014) 0.79

Live imaging, identifying, and tracking single cells in complex populations in vivo and ex vivo. Methods Mol Biol (2013) 0.78

A new way of tracking motion, shape, and divisions. Eur Biophys J (2013) 0.78

Analysis of in vivo single cell behavior by high throughput, human-in-the-loop segmentation of three-dimensional images. BMC Bioinformatics (2015) 0.78

Rapid 3-D delineation of cell nuclei for high-content screening platforms. Comput Biol Med (2015) 0.77

A new method to address unmet needs for extracting individual cell migration features from a large number of cells embedded in 3D volumes. PLoS One (2011) 0.77

An integrated framework for automatic Ki-67 scoring in pancreatic neuroendocrine tumor. Med Image Comput Comput Assist Interv (2013) 0.75

Robust Individual-Cell/Object Tracking via PCANet Deep Network in Biomedicine and Computer Vision. Biomed Res Int (2016) 0.75

Cell Tracking Accuracy Measurement Based on Comparison of Acyclic Oriented Graphs. PLoS One (2015) 0.75

Single cell dynamic phenotyping. Sci Rep (2016) 0.75

Joint level-set and spatio-temporal motion detection for cell segmentation. BMC Med Genomics (2016) 0.75

Segmentation and Tracking of Lymphocytes Based on Modified Active Contour Models in Phase Contrast Microscopy Images. Comput Math Methods Med (2015) 0.75

Automated Functional Analysis of Astrocytes from Chronic Time-Lapse Calcium Imaging Data. Front Neuroinform (2017) 0.75

Trajectory energy minimization for cell growth tracking and genealogy analysis. R Soc Open Sci (2017) 0.75

A Hybrid Approach for Segmentation and Tracking of Myxococcus Xanthus Swarms. IEEE Trans Med Imaging (2016) 0.75

Incidental findings on brain MRI in the general population. N Engl J Med (2007) 8.59

The structure-specific endonuclease Mus81 contributes to replication restart by generating double-strand DNA breaks. Nat Struct Mol Biol (2007) 3.38

Dynamics of DNA double-strand breaks revealed by clustering of damaged chromosome domains. Science (2004) 3.20

Additive value of semiautomated quantification of coronary artery disease using cardiac computed tomographic angiography to predict future acute coronary syndrome. J Am Coll Cardiol (2013) 3.12

The structure-specific endonuclease Mus81-Eme1 promotes conversion of interstrand DNA crosslinks into double-strands breaks. EMBO J (2006) 2.89

Kidney function is related to cerebral small vessel disease. Stroke (2007) 2.77

Nuclear dynamics of PCNA in DNA replication and repair. Mol Cell Biol (2005) 2.44

Genome-wide association studies of cerebral white matter lesion burden: the CHARGE consortium. Ann Neurol (2011) 2.37

Perturbations of vascular homeostasis and aortic valve abnormalities in fibulin-4 deficient mice. Circ Res (2007) 2.32

Automatic construction of multiple-object three-dimensional statistical shape models: application to cardiac modeling. IEEE Trans Med Imaging (2002) 2.23

DNA damage induced Pol eta recruitment takes place independently of the cell cycle phase. Cell Cycle (2009) 2.21

Brca2 (XRCC11) deficiency results in radioresistant DNA synthesis and a higher frequency of spontaneous deletions. Mol Cell Biol (2002) 2.14

Involvement of mammalian Mus81 in genome integrity and tumor suppression. Science (2004) 2.03

Particle filtering for multiple object tracking in dynamic fluorescence microscopy images: application to microtubule growth analysis. IEEE Trans Med Imaging (2008) 2.03

Changes in normal-appearing white matter precede development of white matter lesions. Stroke (2013) 2.01

MicroRNA-29 in aortic dilation: implications for aneurysm formation. Circ Res (2011) 2.01

CTG repeat instability and size variation timing in DNA repair-deficient mice. EMBO J (2003) 1.96

A genome-wide association study identifies five loci influencing facial morphology in Europeans. PLoS Genet (2012) 1.91

Rad54 and DNA Ligase IV cooperate to maintain mammalian chromatid stability. Genes Dev (2004) 1.84

Common variants at 12q14 and 12q24 are associated with hippocampal volume. Nat Genet (2012) 1.79

Collaboration of homologous recombination and nonhomologous end-joining factors for the survival and integrity of mice and cells. Genes Dev (2004) 1.77

Tracking in cell and developmental biology. Semin Cell Dev Biol (2009) 1.77

White matter microstructural integrity and cognitive function in a general elderly population. Arch Gen Psychiatry (2009) 1.74

Hippocampus segmentation in MR images using atlas registration, voxel classification, and graph cuts. Neuroimage (2008) 1.69

Dynamic behavior of GFP-CLIP-170 reveals fast protein turnover on microtubule plus ends. J Cell Biol (2008) 1.68

Eme1 is involved in DNA damage processing and maintenance of genomic stability in mammalian cells. EMBO J (2003) 1.68

Involvement of the nuclear proteasome activator PA28γ in the cellular response to DNA double-strand breaks. Cell Cycle (2011) 1.63

In vitro reconstitution of the functional interplay between MCAK and EB3 at microtubule plus ends. Curr Biol (2010) 1.63

Differential contributions of mammalian Rad54 paralogs to recombination, DNA damage repair, and meiosis. Mol Cell Biol (2006) 1.63

Multiscale vessel tracking. IEEE Trans Med Imaging (2004) 1.62

Activation of multiple DNA repair pathways by sub-nuclear damage induction methods. J Cell Sci (2007) 1.62

Standardized evaluation methodology and reference database for evaluating coronary artery centerline extraction algorithms. Med Image Anal (2009) 1.58

Common variants at 6q22 and 17q21 are associated with intracranial volume. Nat Genet (2012) 1.51

A 10-year follow-up of hippocampal volume on magnetic resonance imaging in early dementia and cognitive decline. Brain (2010) 1.49

Vessel enhancing diffusion: a scale space representation of vessel structures. Med Image Anal (2006) 1.45

Accuracy and reproducibility study of automatic MRI brain tissue segmentation methods. Neuroimage (2010) 1.44

DNA damage stabilizes interaction of CSB with the transcription elongation machinery. J Cell Biol (2004) 1.42

Quantitative comparison of spot detection methods in fluorescence microscopy. IEEE Trans Med Imaging (2009) 1.42

Mild hyperthermia inhibits homologous recombination, induces BRCA2 degradation, and sensitizes cancer cells to poly (ADP-ribose) polymerase-1 inhibition. Proc Natl Acad Sci U S A (2011) 1.36

Brain shift estimation in image-guided neurosurgery using 3-D ultrasound. IEEE Trans Biomed Eng (2005) 1.34

Brain tissue volumes in the general elderly population. The Rotterdam Scan Study. Neurobiol Aging (2007) 1.31

In vivo characterization and quantification of atherosclerotic carotid plaque components with multidetector computed tomography and histopathological correlation. Arterioscler Thromb Vasc Biol (2006) 1.31

Enhanced chromatin dynamics by FACT promotes transcriptional restart after UV-induced DNA damage. Mol Cell (2013) 1.30

The ubiquitin-conjugating DNA repair enzyme HR6A is a maternal factor essential for early embryonic development in mice. Mol Cell Biol (2004) 1.29

Adapting Active Shape Models for 3D segmentation of tubular structures in medical images. Inf Process Med Imaging (2003) 1.29

RTEL1 contributes to DNA replication and repair and telomere maintenance. Mol Biol Cell (2012) 1.28

Rab6, Rab8, and MICAL3 cooperate in controlling docking and fusion of exocytotic carriers. Curr Biol (2011) 1.26

Recruitment of the nucleotide excision repair endonuclease XPG to sites of UV-induced dna damage depends on functional TFIIH. Mol Cell Biol (2006) 1.24

UTF1 is a chromatin-associated protein involved in ES cell differentiation. J Cell Biol (2007) 1.24

Mutation of the mouse Rad17 gene leads to embryonic lethality and reveals a role in DNA damage-dependent recombination. EMBO J (2004) 1.22

Level-set-based artery-vein separation in blood pool agent CE-MR angiograms. IEEE Trans Med Imaging (2003) 1.19

Insights into EB1 structure and the role of its C-terminal domain for discriminating microtubule tips from the lattice. Mol Biol Cell (2011) 1.19

Genetic determination of human facial morphology: links between cleft-lips and normal variation. Eur J Hum Genet (2011) 1.17

Analysis of ionizing radiation-induced foci of DNA damage repair proteins. Mutat Res (2005) 1.17

Standardized evaluation methodology for 2-D-3-D registration. IEEE Trans Med Imaging (2005) 1.16

Rad21-cohesin haploinsufficiency impedes DNA repair and enhances gastrointestinal radiosensitivity in mice. PLoS One (2010) 1.16

Global and focal brain volume in long-term breast cancer survivors exposed to adjuvant chemotherapy. Breast Cancer Res Treat (2011) 1.16

Characteristics of DNA-binding proteins determine the biological sensitivity to high-linear energy transfer radiation. Nucleic Acids Res (2010) 1.15

Ionizing radiation-induced foci formation of mammalian Rad51 and Rad54 depends on the Rad51 paralogs, but not on Rad52. Mutat Res (2005) 1.14

3D MRA coronary axis determination using a minimum cost path approach. Magn Reson Med (2002) 1.14

In vivo live imaging of RNA polymerase II transcription factories in primary cells. Genes Dev (2013) 1.12

Induction of linear tracks of DNA double-strand breaks by alpha-particle irradiation of cells. Nat Methods (2008) 1.12

Vessel axis tracking using topology constrained surface evolution. IEEE Trans Med Imaging (2007) 1.11

White matter lesion extension to automatic brain tissue segmentation on MRI. Neuroimage (2009) 1.10

MR venography of the human brain using susceptibility weighted imaging at very high field strength. MAGMA (2008) 1.10

Analysis of DNA double-strand break repair pathways in mice. Mutat Res (2006) 1.09

Automated brain structure segmentation based on atlas registration and appearance models. IEEE Trans Med Imaging (2011) 1.09

3D fusion of intravascular ultrasound and coronary computed tomography for in-vivo wall shear stress analysis: a feasibility study. Int J Cardiovasc Imaging (2009) 1.09

Facilitating tumor functional assessment by spatially relating 3D tumor histology and in vivo MRI: image registration approach. PLoS One (2011) 1.08

Multi-spectral brain tissue segmentation using automatically trained k-Nearest-Neighbor classification. Neuroimage (2007) 1.07

The Rotterdam Scan Study: design and update up to 2012. Eur J Epidemiol (2011) 1.07

High blood pressure and cerebral white matter lesion progression in the general population. Hypertension (2013) 1.07

DNA double-strand breaks are not sufficient to initiate recruitment of TRF2. Nat Genet (2007) 1.06

Accuracy evaluation of direct navigation with an isocentric 3D rotational X-ray system. Med Image Anal (2005) 1.05

History-dependent catastrophes regulate axonal microtubule behavior. Curr Biol (2010) 1.05

Three-dimensional guide-wire reconstruction from biplane image sequences for integrated display in 3-D vasculature. IEEE Trans Med Imaging (2003) 1.04

Total cerebral blood flow in relation to cognitive function: the Rotterdam Scan Study. J Cereb Blood Flow Metab (2008) 1.04

End-binding proteins sensitize microtubules to the action of microtubule-targeting agents. Proc Natl Acad Sci U S A (2013) 1.04

Multiethnic genome-wide association study of cerebral white matter hyperintensities on MRI. Circ Cardiovasc Genet (2015) 1.03

Multimodality imaging reveals a gradual increase in matrix metalloproteinase activity at aneurysmal lesions in live fibulin-4 mice. Circ Cardiovasc Imaging (2010) 1.03

Stepwise androgen receptor dimerization. J Cell Sci (2012) 1.02

The role of the renin-angiotensin system in thoracic aortic aneurysms: clinical implications. Pharmacol Ther (2011) 1.02

ATP-dependent and independent functions of Rad54 in genome maintenance. J Cell Biol (2011) 1.02

Three-dimensional rotational X-ray navigation for needle guidance in percutaneous vertebroplasty: an accuracy study. Spine (Phila Pa 1976) (2006) 1.01

Rao-Blackwellized marginal particle filtering for multiple object tracking in molecular bioimaging. Inf Process Med Imaging (2007) 1.01

Brain tissue volumes in relation to cognitive function and risk of dementia. Neurobiol Aging (2008) 1.01

Segmentation of tumors in magnetic resonance brain images using an interactive multiscale watershed algorithm. Acad Radiol (2004) 1.01

Three-dimensional registration of histology of human atherosclerotic carotid plaques to in-vivo imaging. J Biomech (2010) 1.00

Automatic image-driven segmentation of the ventricles in cardiac cine MRI. J Magn Reson Imaging (2008) 0.99

Accurate estimation of microtubule dynamics using kymographs and variable-rate particle filters. Conf Proc IEEE Eng Med Biol Soc (2009) 0.99

Automated analysis of time-lapse fluorescence microscopy images: from live cell images to intracellular foci. Bioinformatics (2010) 0.99

Super-resolution methods in MRI: can they improve the trade-off between resolution, signal-to-noise ratio, and acquisition time? Magn Reson Med (2012) 0.98