Published in Plant Biotechnol J on February 28, 2011
Combining SNP discovery from next-generation sequencing data with bulked segregant analysis (BSA) to fine-map genes in polyploid wheat. BMC Plant Biol (2012) 1.88
Chromosomes in the flow to simplify genome analysis. Funct Integr Genomics (2012) 1.09
Integrating cereal genomics to support innovation in the Triticeae. Funct Integr Genomics (2012) 1.06
The perennial ryegrass GenomeZipper: targeted use of genome resources for comparative grass genomics. Plant Physiol (2012) 1.04
Sequence-based analysis of translocations and inversions in bread wheat (Triticum aestivum L.). PLoS One (2013) 1.00
Patterns of homoeologous gene expression shown by RNA sequencing in hexaploid bread wheat. BMC Genomics (2014) 0.94
Functional features of a single chromosome arm in wheat (1AL) determined from its structure. Funct Integr Genomics (2011) 0.93
Genomics reveals new landscapes for crop improvement. Genome Biol (2013) 0.93
Chromosome arm-specific BAC end sequences permit comparative analysis of homoeologous chromosomes and genomes of polyploid wheat. BMC Plant Biol (2012) 0.92
Discovery of Single Nucleotide Polymorphisms in Complex Genomes Using SGSautoSNP. Biology (Basel) (2012) 0.90
Next-generation survey sequencing and the molecular organization of wheat chromosome 6B. DNA Res (2013) 0.89
Integration of genetic and physical maps of the chickpea (Cicer arietinum L.) genome using flow-sorted chromosomes. Chromosome Res (2011) 0.89
Chromosome isolation by flow sorting in Aegilops umbellulata and Ae. comosa and their allotetraploid hybrids Ae. biuncialis and Ae. geniculata. PLoS One (2011) 0.87
Discovery of high-confidence single nucleotide polymorphisms from large-scale de novo analysis of leaf transcripts of Aegilops tauschii, a wild wheat progenitor. DNA Res (2012) 0.86
BioNano genome mapping of individual chromosomes supports physical mapping and sequence assembly in complex plant genomes. Plant Biotechnol J (2016) 0.86
Sequence composition and gene content of the short arm of rye (Secale cereale) chromosome 1. PLoS One (2012) 0.84
The physical map of wheat chromosome 5DS revealed gene duplications and small rearrangements. BMC Genomics (2015) 0.81
Extensive pericentric rearrangements in the bread wheat (Triticum aestivum L.) genotype "Chinese Spring" revealed from chromosome shotgun sequence data. Genome Biol Evol (2014) 0.80
New insights into the wheat chromosome 4D structure and virtual gene order, revealed by survey pyrosequencing. Plant Sci (2014) 0.80
Accelerated senescence and enhanced disease resistance in hybrid chlorosis lines derived from interspecific crosses between tetraploid wheat and Aegilops tauschii. PLoS One (2015) 0.79
Massively-parallel sequencing of genes on a single chromosome: a comparison of solution hybrid selection and flow sorting. BMC Genomics (2013) 0.78
Integration of mate pair sequences to improve shotgun assemblies of flow-sorted chromosome arms of hexaploid wheat. BMC Genomics (2013) 0.78
Next generation characterisation of cereal genomes for marker discovery. Biology (Basel) (2013) 0.77
Construction and characterization of three wheat bacterial artificial chromosome libraries. Int J Mol Sci (2014) 0.75
Plant exomics: concepts, applications and methodologies in crop improvement. Plant Signal Behav (2015) 0.75
Re-discovering ancient wheat varieties as functional foods. J Tradit Complement Med (2015) 0.75
Geneious Basic: an integrated and extendable desktop software platform for the organization and analysis of sequence data. Bioinformatics (2012) 26.90
The genome of the mesopolyploid crop species Brassica rapa. Nat Genet (2011) 8.23
Genome sequences of rare, uncultured bacteria obtained by differential coverage binning of multiple metagenomes. Nat Biotechnol (2013) 6.40
Averting biodiversity collapse in tropical forest protected areas. Nature (2012) 4.46
Short-term and long-term risk of tuberculosis associated with CD4 cell recovery during antiretroviral therapy in South Africa. AIDS (2009) 4.07
Identification of tumor-initiating cells in a p53-null mouse model of breast cancer. Cancer Res (2008) 3.45
Draft genome sequence of chickpea (Cicer arietinum) provides a resource for trait improvement. Nat Biotechnol (2013) 3.41
Redundancy based detection of sequence polymorphisms in expressed sequence tag data using autoSNP. Bioinformatics (2003) 3.11
Unlocking the barley genome by chromosomal and comparative genomics. Plant Cell (2011) 3.03
Fast, accurate error-correction of amplicon pyrosequences using Acacia. Nat Methods (2012) 2.77
An intraductal human-in-mouse transplantation model mimics the subtypes of ductal carcinoma in situ. Breast Cancer Res (2009) 2.37
Anaerobic oxidation of methane coupled to nitrate reduction in a novel archaeal lineage. Nature (2013) 2.07
Mining for single nucleotide polymorphisms and insertions/deletions in maize expressed sequence tag data. Plant Physiol (2003) 2.05
Comparative oncogenomics identifies breast tumors enriched in functional tumor-initiating cells. Proc Natl Acad Sci U S A (2011) 2.01
Frequent gene movement and pseudogene evolution is common to the large and complex genomes of wheat, barley, and their relatives. Plant Cell (2011) 1.98
The TOBY Study. Whole body hypothermia for the treatment of perinatal asphyxial encephalopathy: a randomised controlled trial. BMC Pediatr (2008) 1.91
A gene-driven ENU-based approach to generating an allelic series in any gene. Mamm Genome (2004) 1.82
The susceptibility of small fruits and cherries to the spotted-wing drosophila, Drosophila suzukii. Pest Manag Sci (2011) 1.71
ARABIDOPSIS TRITHORAX1 dynamically regulates FLOWERING LOCUS C activation via histone 3 lysine 4 trimethylation. Plant Cell (2008) 1.66
The reference genetic linkage map for the multinational Brassica rapa genome sequencing project. Theor Appl Genet (2007) 1.65
Next-generation sequencing and syntenic integration of flow-sorted arms of wheat chromosome 4A exposes the chromosome structure and gene content. Plant J (2011) 1.60
Chromosome-based genomics in the cereals. Chromosome Res (2007) 1.59
Transcriptome and methylome profiling reveals relics of genome dominance in the mesopolyploid Brassica oleracea. Genome Biol (2014) 1.56
An expanded genomic representation of the phylum cyanobacteria. Genome Biol Evol (2014) 1.56
Accessing complex crop genomes with next-generation sequencing. Theor Appl Genet (2012) 1.54
Simple sequence repeat marker loci discovery using SSR primer. Bioinformatics (2004) 1.54
Use of machine learning theory to predict the need for femoral nerve block following ACL repair. Pain Med (2011) 1.52
Plant genome sequencing: applications for crop improvement. Plant Biotechnol J (2009) 1.50
Low dose intravenous minocycline is neuroprotective after middle cerebral artery occlusion-reperfusion in rats. BMC Neurol (2004) 1.47
An evidence based alcohol screening, brief intervention and referral to treatment (SBIRT) curriculum for emergency department (ED) providers improves skills and utilization. Subst Abus (2007) 1.45
Segmentation of brain MRI in young children. Acad Radiol (2007) 1.45
SSRPrimer and SSR Taxonomy Tree: Biome SSR discovery. Nucleic Acids Res (2006) 1.43
SNPServer: a real-time SNP discovery tool. Nucleic Acids Res (2005) 1.42
The wheat powdery mildew genome shows the unique evolution of an obligate biotroph. Nat Genet (2013) 1.38
Selfish supernumerary chromosome reveals its origin as a mosaic of host genome and organellar sequences. Proc Natl Acad Sci U S A (2012) 1.37
Sequence and structure of Brassica rapa chromosome A3. Genome Biol (2010) 1.35
AutoSNPdb: an annotated single nucleotide polymorphism database for crop plants. Nucleic Acids Res (2008) 1.35
Dissecting large and complex genomes: flow sorting and BAC cloning of individual chromosomes from bread wheat. Plant J (2004) 1.31
Complications arising from catheter ablation of atrial fibrillation: temporal trends and predictors. Heart Rhythm (2011) 1.28
De novo sequencing of plant genomes using second-generation technologies. Brief Bioinform (2009) 1.27
Wheat syntenome unveils new evidences of contrasted evolutionary plasticity between paleo- and neoduplicated subgenomes. Plant J (2013) 1.26
The elongata mutants identify a functional Elongator complex in plants with a role in cell proliferation during organ growth. Proc Natl Acad Sci U S A (2005) 1.26
Plant bioinformatics: from genome to phenome. Trends Biotechnol (2004) 1.24
HIV-1 drug resistance evolution among patients on potent combination antiretroviral therapy with detectable viremia. J Acquir Immune Defic Syndr (2005) 1.23
Exploring genetic variation in the tomato (Solanum section Lycopersicon) clade by whole-genome sequencing. Plant J (2014) 1.22
Next-generation sequencing applications for wheat crop improvement. Am J Bot (2012) 1.22
Reduced fractional anisotropy on diffusion tensor magnetic resonance imaging after hypoxic-ischemic encephalopathy. Pediatrics (2006) 1.22
Single nucleotide polymorphism discovery from wheat next-generation sequence data. Plant Biotechnol J (2012) 1.22
Plant centromeric retrotransposons: a structural and cytogenetic perspective. Mob DNA (2011) 1.21
New technologies for ultra-high throughput genotyping in plants. Methods Mol Biol (2009) 1.20
Genome sequence data: management, storage, and visualization. Biotechniques (2009) 1.19
Y-chromosomal insights into the genetic impact of the caste system in India. Hum Genet (2006) 1.19
Diffusion-weighted magnetic resonance imaging in term perinatal brain injury: a comparison with site of lesion and time from birth. Pediatrics (2004) 1.15
The RON1/FRY1/SAL1 gene is required for leaf morphogenesis and venation patterning in Arabidopsis. Plant Physiol (2009) 1.12
BAC library resources for map-based cloning and physical map construction in barley (Hordeum vulgare L.). BMC Genomics (2011) 1.12
Making the most of 'omics' for crop breeding. Trends Biotechnol (2010) 1.12
The ITS1-5.8S-ITS2 sequence region in the Musaceae: structure, diversity and use in molecular phylogeny. PLoS One (2011) 1.12
A consensus map of rapeseed (Brassica napus L.) based on diversity array technology markers: applications in genetic dissection of qualitative and quantitative traits. BMC Genomics (2013) 1.11
Chromosomes in the flow to simplify genome analysis. Funct Integr Genomics (2012) 1.09
Sequencing wheat chromosome arm 7BS delimits the 7BS/4AL translocation and reveals homoeologous gene conservation. Theor Appl Genet (2011) 1.09
First survey of the wheat chromosome 5A composition through a next generation sequencing approach. PLoS One (2011) 1.09
Initial experience with magnetic resonance imaging of atrial scar and co-registration with electroanatomic voltage mapping during atrial fibrillation: success and limitations. Heart Rhythm (2012) 1.09
A transcriptomics resource for wheat functional genomics. Plant Biotechnol J (2004) 1.08
Dissection of the nuclear genome of barley by chromosome flow sorting. Theor Appl Genet (2006) 1.07
Preparation and in vivo evaluation of a dry powder for inhalation of capreomycin. Pharm Res (2007) 1.06
Genomic distribution of simple sequence repeats in Brassica rapa. Mol Cells (2007) 1.05