Published in PLoS One on August 10, 2011
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Bayesian methods for multivariate modeling of pleiotropic SNP associations and genetic risk prediction. Front Genet (2012) 1.19
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An algorithm for direct causal learning of influences on patient outcomes. Artif Intell Med (2016) 0.75
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Discovering causal interactions using Bayesian network scoring and information gain. BMC Bioinformatics (2016) 0.75
An omnibus permutation test on ensembles of two-locus analyses can detect pure epistasis and genetic heterogeneity in genome-wide association studies. Springerplus (2013) 0.75
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FGFR2 and other loci identified in genome-wide association studies are associated with breast cancer in African-American and younger women. Carcinogenesis (2010) 1.63
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Genomic convergence to identify candidate genes for Alzheimer disease on chromosome 10. Hum Mutat (2009) 1.21
Learning genetic epistasis using Bayesian network scoring criteria. BMC Bioinformatics (2011) 1.21
A fast algorithm for learning epistatic genomic relationships. AMIA Annu Symp Proc (2010) 1.08
Fine mapping of the chromosome 10q11-q21 linkage region in Alzheimer's disease cases and controls. Neurogenetics (2010) 1.02
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Biological processes, properties and molecular wiring diagrams of candidate low-penetrance breast cancer susceptibility genes. BMC Med Genomics (2008) 0.92
Genome-wide association defines more than 30 distinct susceptibility loci for Crohn's disease. Nat Genet (2008) 30.20
A genome-wide association study identifies IL23R as an inflammatory bowel disease gene. Science (2006) 27.49
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Evidence-based anomaly detection in clinical domains. AMIA Annu Symp Proc (2007) 3.76
Ulcerative colitis-risk loci on chromosomes 1p36 and 12q15 found by genome-wide association study. Nat Genet (2009) 3.65
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The development of common data elements for a multi-institute prostate cancer tissue bank: the Cooperative Prostate Cancer Tissue Resource (CPCTR) experience. BMC Cancer (2005) 2.35
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Synergies and distinctions between computational disciplines in biomedical research: perspective from the Clinical andTranslational Science Award programs. Acad Med (2009) 2.25
Alcohol consumption, cigarette smoking, and the risk of recurrent acute and chronic pancreatitis. Arch Intern Med (2009) 2.23
Implementation and evaluation of a negation tagger in a pipeline-based system for information extract from pathology reports. Stud Health Technol Inform (2004) 2.16
Outlier detection for patient monitoring and alerting. J Biomed Inform (2012) 2.10
The Biomedical Resource Ontology (BRO) to enable resource discovery in clinical and translational research. J Biomed Inform (2010) 2.10
An informatics model for tissue banks--lessons learned from the Cooperative Prostate Cancer Tissue Resource. BMC Cancer (2006) 1.97
High Incidence of Somatic BAP1 alterations in sporadic malignant mesothelioma. J Thorac Oncol (2015) 1.93
The development and deployment of Common Data Elements for tissue banks for translational research in cancer - an emerging standard based approach for the Mesothelioma Virtual Tissue Bank. BMC Cancer (2008) 1.88
Multicenter approach to recurrent acute and chronic pancreatitis in the United States: the North American Pancreatitis Study 2 (NAPS2). Pancreatology (2008) 1.87
The cooperative prostate cancer tissue resource: a specimen and data resource for cancer researchers. Clin Cancer Res (2004) 1.85
A novel cross-disciplinary multi-institute approach to translational cancer research: lessons learned from Pennsylvania Cancer Alliance Bioinformatics Consortium (PCABC). Cancer Inform (2007) 1.76
The tissue microarray data exchange specification: implementation by the Cooperative Prostate Cancer Tissue Resource. BMC Bioinformatics (2004) 1.74
Common genetic variants in the CLDN2 and PRSS1-PRSS2 loci alter risk for alcohol-related and sporadic pancreatitis. Nat Genet (2012) 1.63
The Bayesian aerosol release detector: an algorithm for detecting and characterizing outbreaks caused by an atmospheric release of Bacillus anthracis. Stat Med (2007) 1.62
Patient-specific models for predicting the outcomes of patients with community acquired pneumonia. AMIA Annu Symp Proc (2005) 1.61
Next generation sequencing in clinical medicine: Challenges and lessons for pathology and biomedical informatics. J Pathol Inform (2012) 1.58
Design and analysis of a content-based pathology image retrieval system. IEEE Trans Inf Technol Biomed (2003) 1.55
SPINK1/PSTI mutations are associated with tropical pancreatitis and type II diabetes mellitus in Bangladesh. Gastroenterology (2002) 1.53
The application of naive Bayes model averaging to predict Alzheimer's disease from genome-wide data. J Am Med Inform Assoc (2011) 1.52
Provider management of and satisfaction with laboratory testing in the nursing home setting: results of a national internet-based survey. J Am Med Dir Assoc (2009) 1.52
Telepathology for patient care: what am I getting myself into? Adv Anat Pathol (2010) 1.50
Tests for finding complex patterns of differential expression in cancers: towards individualized medicine. BMC Bioinformatics (2004) 1.49
A Pattern Mining Approach for Classifying Multivariate Temporal Data. Proceedings (IEEE Int Conf Bioinformatics Biomed) (2011) 1.45
Clinical and molecular heterogeneity in the Brugada syndrome: a novel gene locus on chromosome 3. Circulation (2002) 1.43
Creating a text classifier to detect radiology reports describing mediastinal findings associated with inhalational anthrax and other disorders. J Am Med Inform Assoc (2003) 1.42
A prediction rule to identify low-risk patients with heart failure. Acad Emerg Med (2005) 1.40
Database construction for improving patient safety by examining pathology errors. Am J Clin Pathol (2005) 1.39
Automated clinical annotation of tissue bank specimens. Stud Health Technol Inform (2004) 1.35
Physical activity levels in American-Indian adults: the Strong Heart Family Study. Am J Prev Med (2009) 1.32
Pathways to injury in chronic pancreatitis: decoding the role of the high-risk SPINK1 N34S haplotype using meta-analysis. PLoS One (2008) 1.32
Bayesian rule learning for biomedical data mining. Bioinformatics (2010) 1.29
Combined bicarbonate conductance-impairing variants in CFTR and SPINK1 variants are associated with chronic pancreatitis in patients without cystic fibrosis. Gastroenterology (2010) 1.27
Application of an efficient Bayesian discretization method to biomedical data. BMC Bioinformatics (2011) 1.27
Identifying Deviations from Usual Medical Care using a Statistical Approach. AMIA Annu Symp Proc (2010) 1.24
Increasing incidence of acute pancreatitis at an American pediatric tertiary care center: is greater awareness among physicians responsible? Pancreas (2010) 1.23
Identifying genetic interactions in genome-wide data using Bayesian networks. Genet Epidemiol (2010) 1.22
Association of CLU and PICALM variants with Alzheimer's disease. Neurobiol Aging (2010) 1.22
Learning genetic epistasis using Bayesian network scoring criteria. BMC Bioinformatics (2011) 1.21
Learning patient-specific predictive models from clinical data. J Biomed Inform (2010) 1.18
In vitro transcription amplification and labeling methods contribute to the variability of gene expression profiling with DNA microarrays. J Mol Diagn (2006) 1.14
Availability and quality of paraffin blocks identified in pathology archives: a multi-institutional study by the Shared Pathology Informatics Network (SPIN). BMC Cancer (2007) 1.14
Prevalence of incidental prostate cancer in the general population: a study of healthy organ donors. J Urol (2008) 1.14
An evaluation of a system that recommends microarray experiments to perform to discover gene-regulation pathways. Artif Intell Med (2004) 1.13
A fast algorithm for learning epistatic genomic relationships. AMIA Annu Symp Proc (2010) 1.08
Issues in applied statistics for public health bioterrorism surveillance using multiple data streams: research needs. Stat Med (2007) 1.08
Genetic and environmental influences on thyroid hormone variation in Mexican Americans. J Clin Endocrinol Metab (2004) 1.08
Genetic variation in fatty acid-binding protein-4 and peroxisome proliferator-activated receptor gamma interactively influence insulin sensitivity and body composition in males. Metabolism (2004) 1.07
Bayesian prediction of an epidemic curve. J Biomed Inform (2008) 1.07
Synoptic tool for reporting of hematological and lymphoid neoplasms based on World Health Organization classification and College of American Pathologists checklist. BMC Cancer (2007) 1.06
Pathology informatics fellowship retreats: The use of interactive scenarios and case studies as pathology informatics teaching tools. J Pathol Inform (2012) 1.05
Association of the peroxisome proliferator-activated receptor gamma gene with type 2 diabetes mellitus varies by physical activity among non-Hispanic whites from Colorado. Metabolism (2007) 1.04
Causal discovery using a Bayesian local causal discovery algorithm. Stud Health Technol Inform (2004) 1.04
Limited contribution of the SPINK1 N34S mutation to the risk and severity of alcoholic chronic pancreatitis: a report from the United States. Dig Dis Sci (2003) 1.03
A Bayesian spatio-temporal method for disease outbreak detection. J Am Med Inform Assoc (2010) 1.03
Is the monocyte chemotactic protein-1 -2518 G allele a risk factor for severe acute pancreatitis? Clin Gastroenterol Hepatol (2005) 1.01
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Automated ancillary cancer history classification for mesothelioma patients from free-text clinical reports. J Pathol Inform (2010) 1.00
Detecting adverse drug events in discharge summaries using variations on the simple Bayes model. AMIA Annu Symp Proc (2003) 0.99
Evaluation of preprocessing techniques for chief complaint classification. J Biomed Inform (2007) 0.98
Mining pure, strict epistatic interactions from high-dimensional datasets: ameliorating the curse of dimensionality. PLoS One (2012) 0.97
Assessing the performance characteristics of signals used by a clinical event monitor to detect adverse drug reactions in the nursing home. AMIA Annu Symp Proc (2008) 0.96
A recursive algorithm for spatial cluster detection. AMIA Annu Symp Proc (2007) 0.96
Whole exome sequencing identifies multiple, complex etiologies in an idiopathic hereditary pancreatitis kindred. JOP (2012) 0.96
The history of pathology informatics: A global perspective. J Pathol Inform (2013) 0.96
Does the pain-protective GTP cyclohydrolase haplotype significantly alter the pattern or severity of pain in humans with chronic pancreatitis? Mol Pain (2008) 0.95
A control study to evaluate a computer-based microarray experiment design recommendation system for gene-regulation pathways discovery. J Biomed Inform (2005) 0.94
Analysis of tumor necrosis factor-alpha, transforming growth factor-beta 1, interleukin-10, and interferon-gamma polymorphisms in patients with alcoholic chronic pancreatitis. Alcohol (2004) 0.94
Pooling-based genome-wide association study implicates gamma-glutamyltransferase 1 (GGT1) gene in pancreatic carcinogenesis. Pancreatology (2010) 0.94
A Bayesian method for identifying genetic interactions. AMIA Annu Symp Proc (2009) 0.93
Evaluating disorders with a complex genetics basis. the future roles of meta-analysis and systems biology. Dig Dis Sci (2005) 0.93
Genetic variants in major histocompatibility complex-linked genes associate with pediatric liver transplant rejection. Gastroenterology (2008) 0.93
National Mesothelioma Virtual Bank: a standard based biospecimen and clinical data resource to enhance translational research. BMC Cancer (2008) 0.92
Phenotype-stratified genetic linkage study demonstrates that IBD2 is an extensive ulcerative colitis locus. Am J Gastroenterol (2006) 0.92
Analysis of a failed clinical decision support system for management of congestive heart failure. AMIA Annu Symp Proc (2008) 0.92
Proteomic analysis of stage I endometrial cancer tissue: identification of proteins associated with oxidative processes and inflammation. Gynecol Oncol (2011) 0.91
A decade of experience in the development and implementation of tissue banking informatics tools for intra and inter-institutional translational research. J Pathol Inform (2010) 0.91
Webcasting pathology department conferences in a geographically distributed medical center. Hum Pathol (2004) 0.89
Comprehensive analysis of HLA-G: implications for recurrent spontaneous abortion. Reprod Sci (2010) 0.89
Hereditary, familial, and idiopathic chronic pancreatitis are not associated with polymorphisms in the tumor necrosis factor alpha (TNF-alpha) promoter region or the TNF receptor 1 (TNFR1) gene. Genet Med (2003) 0.89
The tissue microarray OWL schema: An open-source tool for sharing tissue microarray data. J Pathol Inform (2010) 0.89
Immunohistochemical analysis of ezrin-radixin-moesin-binding phosphoprotein 50 in prostatic adenocarcinoma. BMC Urol (2011) 0.88
Genome-wide homozygosity mapping localizes a gene for autosomal recessive non-progressive infantile ataxia to 20q11-q13. Hum Genet (2003) 0.88
Discovery of gene-regulation pathways using local causal search. Proc AMIA Symp (2002) 0.87
Frequency of laboratory monitoring of chronic medications administered to nursing facility residents: results of a national Internet-based study. Consult Pharm (2008) 0.87
Genetic variation in uncoupling protein 3 is associated with dietary intake and body composition in females. Metabolism (2004) 0.86
Evidence for an inflammatory bowel disease locus on chromosome 3p26: linkage, transmission/disequilibrium and partitioning of linkage. Hum Mol Genet (2002) 0.86