Published in BMC Plant Biol on December 02, 2011
Genetic, physiological, and gene expression analyses reveal that multiple QTL enhance yield of rice mega-variety IR64 under drought. PLoS One (2013) 1.32
Drought stress responses in crops. Funct Integr Genomics (2014) 1.19
Comparative transcriptome sequencing of tolerant rice introgression line and its parents in response to drought stress. BMC Genomics (2014) 1.00
De novo assembly and discovery of genes that are involved in drought tolerance in Tibetan Sophora moorcroftiana. PLoS One (2015) 0.93
Genome-Wide Investigation of Hsf Genes in Sesame Reveals Their Segmental Duplication Expansion and Their Active Role in Drought Stress Response. Front Plant Sci (2016) 0.90
Wild barley introgression lines revealed novel QTL alleles for root and related shoot traits in the cultivated barley (Hordeum vulgare L.). BMC Genet (2014) 0.85
Comprehensive gene expression analysis of the NAC gene family under normal growth conditions, hormone treatment, and drought stress conditions in rice using near-isogenic lines (NILs) generated from crossing Aday Selection (drought tolerant) and IR64. Mol Genet Genomics (2012) 0.85
RNA-Seq transcriptome profiling of upland cotton (Gossypium hirsutum L.) root tissue under water-deficit stress. PLoS One (2013) 0.83
Comparative transcriptome analysis of AP2/EREBP gene family under normal and hormone treatments, and under two drought stresses in NILs setup by Aday Selection and IR64. Mol Genet Genomics (2011) 0.83
Subcellular protein overexpression to develop abiotic stress tolerant plants. Front Plant Sci (2013) 0.82
Physiological mechanisms contributing to the QTL-combination effects on improved performance of IR64 rice NILs under drought. J Exp Bot (2015) 0.82
De novo Transcriptome Assembly of Common Wild Rice (Oryza rufipogon Griff.) and Discovery of Drought-Response Genes in Root Tissue Based on Transcriptomic Data. PLoS One (2015) 0.81
Abiotic Stresses: Insight into Gene Regulation and Protein Expression in Photosynthetic Pathways of Plants. Int J Mol Sci (2015) 0.81
Systems responses to progressive water stress in durum wheat. PLoS One (2014) 0.80
Physiological, anatomical and transcriptional alterations in a rice mutant leading to enhanced water stress tolerance. AoB Plants (2015) 0.79
Transcriptome-wide profiling and expression analysis of diploid and autotetraploid Paulownia tomentosa × Paulownia fortunei under drought stress. PLoS One (2014) 0.79
Transcriptional profiling of the leaves of near-isogenic rice lines with contrasting drought tolerance at the reproductive stage in response to water deficit. BMC Genomics (2015) 0.79
Comparative Analysis of the Brassica napus Root and Leaf Transcript Profiling in Response to Drought Stress. Int J Mol Sci (2015) 0.77
Dissection of early transcriptional responses to water stress in Arundo donax L. by unigene-based RNA-seq. Biotechnol Biofuels (2016) 0.77
Transcriptome landscape of perennial wild Cicer microphyllum uncovers functionally relevant molecular tags regulating agronomic traits in chickpea. Sci Rep (2016) 0.76
High-level expression of sugar inducible gene2 (HSI2) is a negative regulator of drought stress tolerance in Arabidopsis. BMC Plant Biol (2013) 0.76
Transcriptomic analysis of the primary roots of Alhagi sparsifolia in response to water stress. PLoS One (2015) 0.76
Transcriptome Analysis of Ramie (Boehmeria nivea L. Gaud.) in Response to Ramie Moth (Cocytodes coerulea Guenée) Infestation. Biomed Res Int (2016) 0.75
Reference genes for accurate gene expression analyses across different tissues, developmental stages and genotypes in rice for drought tolerance. Rice (N Y) (2016) 0.75
Elucidation of Complex Nature of PEG Induced Drought-Stress Response in Rice Root Using Comparative Proteomics Approach. Front Plant Sci (2016) 0.75
Comparative Leaf and Root Transcriptomic Analysis of two Rice Japonica Cultivars Reveals Major Differences in the Root Early Response to Osmotic Stress. Rice (N Y) (2016) 0.75
Global Reprogramming of Transcription in Chinese Fir (Cunninghamia lanceolata) during Progressive Drought Stress and after Rewatering. Int J Mol Sci (2015) 0.75
Integrating Small RNA Sequencing with QTL Mapping for Identification of miRNAs and Their Target Genes Associated with Heat Tolerance at the Flowering Stage in Rice. Front Plant Sci (2017) 0.75
Enhanced disease resistance and drought tolerance in transgenic rice plants overexpressing protein elicitors from Magnaporthe oryzae. PLoS One (2017) 0.75
Analysis of transcription factors among differentially expressed genes induced by drought stress in Populus davidiana. 3 Biotech (2017) 0.75
Root Transcriptomic Analysis Revealing the Importance of Energy Metabolism to the Development of Deep Roots in Rice (Oryza sativa L.). Front Plant Sci (2017) 0.75
Integrated analysis of mRNA and miRNA expression profiling in rice backcrossed progenies (BC2F12) with different plant height. PLoS One (2017) 0.75
TM4: a free, open-source system for microarray data management and analysis. Biotechniques (2003) 38.02
NCBI GEO: mining tens of millions of expression profiles--database and tools update. Nucleic Acids Res (2006) 19.42
Reactive oxygen species: metabolism, oxidative stress, and signal transduction. Annu Rev Plant Biol (2004) 18.76
agriGO: a GO analysis toolkit for the agricultural community. Nucleic Acids Res (2010) 10.53
Reactive oxygen gene network of plants. Trends Plant Sci (2004) 10.49
Transcriptional regulatory networks in cellular responses and tolerance to dehydration and cold stresses. Annu Rev Plant Biol (2006) 8.44
Validation of housekeeping genes as internal control for studying gene expression in rice by quantitative real-time PCR. Biochem Biophys Res Commun (2006) 5.83
Cell identity mediates the response of Arabidopsis roots to abiotic stress. Science (2008) 4.40
When defense pathways collide. The response of Arabidopsis to a combination of drought and heat stress. Plant Physiol (2004) 3.80
Root elongation, water stress, and mechanical impedance: a review of limiting stresses and beneficial root tip traits. J Exp Bot (2011) 3.56
EXPANDER--an integrative program suite for microarray data analysis. BMC Bioinformatics (2005) 3.43
Hormonal changes in the grains of rice subjected to water stress during grain filling. Plant Physiol (2001) 2.52
A gene from the cellulose synthase-like C family encodes a beta-1,4 glucan synthase. Proc Natl Acad Sci U S A (2007) 2.10
An update on abscisic acid signaling in plants and more... Mol Plant (2008) 2.03
Characterization of OsbZIP23 as a key player of the basic leucine zipper transcription factor family for conferring abscisic acid sensitivity and salinity and drought tolerance in rice. Plant Physiol (2008) 2.02
Genes commonly regulated by water-deficit stress in Arabidopsis thaliana. J Exp Bot (2004) 1.96
Quantitative trait loci associated with drought tolerance at reproductive stage in rice. Plant Physiol (2004) 1.92
Over-expression of a LEA gene in rice improves drought resistance under the field conditions. Theor Appl Genet (2007) 1.72
Crosstalk in the responses to abiotic and biotic stresses in Arabidopsis: analysis of gene expression in cytochrome P450 gene superfamily by cDNA microarray. Plant Mol Biol (2004) 1.63
Expression profiling of rice cultivars differing in their tolerance to long-term drought stress. Plant Mol Biol (2008) 1.58
The genetics and transcriptional profiles of the cellulose synthase-like HvCslF gene family in barley. Plant Physiol (2008) 1.58
Genome-wide temporal-spatial gene expression profiling of drought responsiveness in rice. BMC Genomics (2011) 1.52
Overexpression of beta-carotene hydroxylase enhances stress tolerance in Arabidopsis. Nature (2002) 1.52
Functional genomic analysis supports conservation of function among cellulose synthase-like a gene family members and suggests diverse roles of mannans in plants. Plant Physiol (2007) 1.45
Analysis of gene expression and physiological responses in three Mexican maize landraces under drought stress and recovery irrigation. PLoS One (2009) 1.41
Simultaneously improving yield under drought stress and non-stress conditions: a case study of rice (Oryza sativa L.). J Exp Bot (2010) 1.27
Cell expansion in roots. Curr Opin Plant Biol (2004) 1.27
Tissue-adapted invasion strategies of the rice blast fungus Magnaporthe oryzae. Plant Cell (2010) 1.19
Identification of drought-responsive genes in roots of upland rice (Oryza sativa L). BMC Genomics (2008) 1.14
Rice leaf growth and water potential are resilient to evaporative demand and soil water deficit once the effects of root system are neutralized. Plant Cell Environ (2010) 1.13
Expression of rice Ca(2+)-dependent protein kinases (CDPKs) genes under different environmental stresses. FEBS Lett (2007) 1.05
Gene expression profiles in rice roots under low phosphorus stress. Plant Mol Biol (2010) 1.03
Tissue and cell-specific localization of rice aquaporins and their water transport activities. Plant Cell Physiol (2007) 0.99
Transport functions and expression analysis of vacuolar membrane aquaporins in response to various stresses in rice. J Plant Physiol (2008) 0.96
Genome-wide targeted prediction of ABA responsive genes in rice based on over-represented cis-motif in co-expressed genes. Plant Mol Biol (2008) 0.89
Reductions in maize root-tip elongation by salt and osmotic stress do not correlate with apoplastic O2*- levels. Ann Bot (2008) 0.86
Identification of candidate genes for drought stress tolerance in rice by the integration of a genetic (QTL) map with the rice genome physical map. J Zhejiang Univ Sci B (2005) 0.84
Modulating rice stress tolerance by transcription factors. Biotechnol Genet Eng Rev (2008) 0.83
Gibberellin-auxin crosstalk modulates lateral root formation. Plant Cell (2010) 0.79
Molecular adaptations underlying susceptibility and resistance to social defeat in brain reward regions. Cell (2007) 8.99
Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Science (2003) 8.65
Sustained hippocampal chromatin regulation in a mouse model of depression and antidepressant action. Nat Neurosci (2006) 8.24
Epigenetic regulation in psychiatric disorders. Nat Rev Neurosci (2007) 6.00
Histone deacetylase 5 epigenetically controls behavioral adaptations to chronic emotional stimuli. Neuron (2007) 4.96
Genomewide SNP variation reveals relationships among landraces and modern varieties of rice. Proc Natl Acad Sci U S A (2009) 4.65
The Rice Annotation Project Database (RAP-DB): 2008 update. Nucleic Acids Res (2007) 4.23
Comprehensive analysis of NAC family genes in Oryza sativa and Arabidopsis thaliana. DNA Res (2003) 4.01
Curated genome annotation of Oryza sativa ssp. japonica and comparative genome analysis with Arabidopsis thaliana. Genome Res (2007) 3.13
Cocaine regulates MEF2 to control synaptic and behavioral plasticity. Neuron (2008) 3.01
Genome-wide analysis of chromatin regulation by cocaine reveals a role for sirtuins. Neuron (2009) 2.97
IRS2-Akt pathway in midbrain dopamine neurons regulates behavioral and cellular responses to opiates. Nat Neurosci (2006) 2.71
Delta FosB mediates epigenetic desensitization of the c-fos gene after chronic amphetamine exposure. J Neurosci (2008) 2.34
Histone modifications at gene promoter regions in rat hippocampus after acute and chronic electroconvulsive seizures. J Neurosci (2004) 2.30
Spotted leaf11, a negative regulator of plant cell death and defense, encodes a U-box/armadillo repeat protein endowed with E3 ubiquitin ligase activity. Plant Cell (2004) 2.28
Nuclear factor kappa B signaling regulates neuronal morphology and cocaine reward. J Neurosci (2009) 2.25
Imipramine treatment and resiliency exhibit similar chromatin regulation in the mouse nucleus accumbens in depression models. J Neurosci (2009) 2.18
An essential role for DeltaFosB in the nucleus accumbens in morphine action. Nat Neurosci (2006) 2.17
The human herpes virus 8-encoded viral FLICE inhibitory protein physically associates with and persistently activates the Ikappa B kinase complex. J Biol Chem (2002) 2.13
CREB regulation of nucleus accumbens excitability mediates social isolation-induced behavioral deficits. Nat Neurosci (2009) 2.11
Visualization by comprehensive microarray analysis of gene expression programs during transdifferentiation of mesophyll cells into xylem cells. Proc Natl Acad Sci U S A (2002) 2.05
Rice mutant resources for gene discovery. Plant Mol Biol (2004) 1.99
Genome-wide analysis of NAC transcription factor family in rice. Gene (2010) 1.90
Chemical- and irradiation-induced mutants of indica rice IR64 for forward and reverse genetics. Plant Mol Biol (2005) 1.85
qDTY₁.₁, a major QTL for rice grain yield under reproductive-stage drought stress with a consistent effect in multiple elite genetic backgrounds. BMC Genet (2011) 1.76
Construction of a specialized cDNA library from plant cells isolated by laser capture microdissection: toward comprehensive analysis of the genes expressed in the rice phloem. Plant J (2002) 1.73
Antisense transcripts with rice full-length cDNAs. Genome Biol (2003) 1.69
Roles of NAC transcription factors in the regulation of biotic and abiotic stress responses in plants. Front Microbiol (2013) 1.69
A germin-like protein gene family functions as a complex quantitative trait locus conferring broad-spectrum disease resistance in rice. Plant Physiol (2008) 1.68
Epigenetics in the nervous system. J Neurosci (2008) 1.65
Role of 68Ga-DOTATOC PET/CT in initial evaluation of patients with suspected bronchopulmonary carcinoid. Eur J Nucl Med Mol Imaging (2014) 1.63
Sequencing multiple and diverse rice varieties. Connecting whole-genome variation with phenotypes. Plant Physiol (2006) 1.61
The influence of DeltaFosB in the nucleus accumbens on natural reward-related behavior. J Neurosci (2008) 1.58
Isolation and characterization of a rice dwarf mutant with a defect in brassinosteroid biosynthesis. Plant Physiol (2002) 1.51
Multi-parent advanced generation inter-cross (MAGIC) populations in rice: progress and potential for genetics research and breeding. Rice (N Y) (2013) 1.50
Endoscope-assisted intubation: an approach to airway management. Anesth Analg (2007) 1.49
Meta-analysis of grain yield QTL identified during agricultural drought in grasses showed consensus. BMC Genomics (2011) 1.48
Discovery of a novel, monocationic, small-molecule inhibitor of scrapie prion accumulation in cultured sheep microglia and Rov cells. PLoS One (2012) 1.45
Interleukin 1 activates STAT3/nuclear factor-kappaB cross-talk via a unique TRAF6- and p65-dependent mechanism. J Biol Chem (2003) 1.45
Diphenyl furans and aza analogs: effects of structural modification on in vitro activity, DNA binding, and accumulation and distribution in trypanosomes. Antimicrob Agents Chemother (2007) 1.44
A novel feature of microsatellites in plants: a distribution gradient along the direction of transcription. FEBS Lett (2003) 1.42
Biosynthesis and secretion of mugineic acid family phytosiderophores in zinc-deficient barley. Plant J (2006) 1.41
Constitutive NF-kappaB activation, normal Fas-induced apoptosis, and increased incidence of lymphoma in human herpes virus 8 K13 transgenic mice. Proc Natl Acad Sci U S A (2005) 1.41
A National Analysis of Long-term Survival Following Thoracoscopic Versus Open Lobectomy for Stage I Non-small-cell Lung Cancer. Ann Surg (2017) 1.39
Gene structures, classification and expression models of the AP2/EREBP transcription factor family in rice. Plant Cell Physiol (2010) 1.37
Concurrent benign schwannoma of oesophagus and posterior mediastinum. Interact Cardiovasc Thorac Surg (2009) 1.36
Induction of inducible cAMP early repressor expression in nucleus accumbens by stress or amphetamine increases behavioral responses to emotional stimuli. J Neurosci (2006) 1.35
Integrated transcriptomics, proteomics, and metabolomics analyses to survey ozone responses in the leaves of rice seedling. J Proteome Res (2008) 1.35
Epigenetic mechanisms and gene networks in the nervous system. J Neurosci (2005) 1.33
Fine mapping of QTLs for rice grain yield under drought reveals sub-QTLs conferring a response to variable drought severities. Theor Appl Genet (2012) 1.33
Genetic, physiological, and gene expression analyses reveal that multiple QTL enhance yield of rice mega-variety IR64 under drought. PLoS One (2013) 1.32
More genomic resources for less-studied crops. Trends Biotechnol (2010) 1.31
Proteasome-dependent and -independent mechanisms for FosB destabilization: identification of FosB degron domains and implications for DeltaFosB stability. Eur J Neurosci (2007) 1.31
A novel factor FLOURY ENDOSPERM2 is involved in regulation of rice grain size and starch quality. Plant Cell (2010) 1.29
Genetic variation in biomass traits among 20 diverse rice varieties. Plant Physiol (2010) 1.29
BRASSINOSTEROID UPREGULATED1, encoding a helix-loop-helix protein, is a novel gene involved in brassinosteroid signaling and controls bending of the lamina joint in rice. Plant Physiol (2009) 1.28
Levels of active oxygen species are controlled by ascorbic acid and anthocyanin in Arabidopsis. J Agric Food Chem (2003) 1.26
Mutant resources in rice for functional genomics of the grasses. Plant Physiol (2009) 1.25
Characterization of WRKY co-regulatory networks in rice and Arabidopsis. BMC Plant Biol (2009) 1.23
Rice gene expression in response to N-acetylchitooligosaccharide elicitor: comprehensive analysis by DNA microarray with randomly selected ESTs. Plant Mol Biol (2003) 1.22
A novel linear programming approach to fluence map optimization for intensity modulated radiation therapy treatment planning. Phys Med Biol (2003) 1.22
Development and evaluation of a high-throughput, low-cost genotyping platform based on oligonucleotide microarrays in rice. Plant Methods (2008) 1.20
Early stress evokes age-dependent biphasic changes in hippocampal neurogenesis, BDNF expression, and cognition. Biol Psychiatry (2012) 1.19
Transcriptional profiling of genes responsive to abscisic acid and gibberellin in rice: phenotyping and comparative analysis between rice and Arabidopsis. Physiol Genomics (2004) 1.18
Pharmacokinetic and pharmacodynamic profiles of the antitussive principles of Glycyrrhizae radix (licorice), a main component of the Kampo preparation Bakumondo-to (Mai-men-dong-tang). Eur J Pharmacol (2004) 1.18
Thiophene-based diamidine forms a "super" at binding minor groove agent. J Am Chem Soc (2004) 1.18
Transcriptomic analysis indicates putative metabolic changes caused by manipulation of phosphorus availability in rice leaves. J Exp Bot (2006) 1.17
Role of nuclear factor kappaB in ovarian hormone-mediated stress hypersensitivity in female mice. Biol Psychiatry (2009) 1.17
Large spontaneous coronary artery dissections-a study of three cases, literature review, and possible therapeutic strategies. Angiology (2004) 1.16
Gene organization in rice revealed by full-length cDNA mapping and gene expression analysis through microarray. PLoS One (2007) 1.16
Root attributes affecting water uptake of rice (Oryza sativa) under drought. J Exp Bot (2012) 1.16
The virescent-2 mutation inhibits translation of plastid transcripts for the plastid genetic system at an early stage of chloroplast differentiation. Plant Cell Physiol (2004) 1.16
A rice calcium-dependent protein kinase OsCPK12 oppositely modulates salt-stress tolerance and blast disease resistance. Plant J (2011) 1.15
Nonhost resistance of rice to rust pathogens. Mol Plant Microbe Interact (2011) 1.15
Plant-pathogen interactions: disease resistance in modern agriculture. Trends Genet (2012) 1.14
Tinospora cordifolia (Willd.) Hook. f. and Thoms. (Guduchi) - validation of the Ayurvedic pharmacology through experimental and clinical studies. Int J Ayurveda Res (2010) 1.14
Liver abscess in children. Indian J Pediatr (2006) 1.14
Metabolic control analysis is helpful for informed genetic manipulation of oilseed rape (Brassica napus) to increase seed oil content. J Exp Bot (2008) 1.13
Rice leaf growth and water potential are resilient to evaporative demand and soil water deficit once the effects of root system are neutralized. Plant Cell Environ (2010) 1.13
qDTY12.1: a locus with a consistent effect on grain yield under drought in rice. BMC Genet (2013) 1.12
Comparative thermodynamics for monomer and dimer sequence-dependent binding of a heterocyclic dication in the DNA minor groove. J Mol Biol (2002) 1.12
SPIN1, a K homology domain protein negatively regulated and ubiquitinated by the E3 ubiquitin ligase SPL11, is involved in flowering time control in rice. Plant Cell (2008) 1.12
Re: Mistry et al.: a simple two-stage "bailout" technique for the removal of an unyielding ureteric stent (Urology 2013;81:242-244). Urology (2013) 1.11
Distribution of furamidine analogues in tumor cells: targeting of the nucleus or mitochondria depending on the amidine substitution. Cancer Res (2002) 1.11
Leaf gas exchange, carbon isotope discrimination, and grain yield in contrasting rice genotypes subjected to water deficits during the reproductive stage. J Exp Bot (2009) 1.11