Published in Mar Biotechnol (NY) on April 19, 2012
The mucosal immune system of fish: the evolution of tolerating commensals while fighting pathogens. Fish Shellfish Immunol (2013) 1.01
Transcriptome analysis reveals a rich gene set related to innate immunity in the Eastern oyster (Crassostrea virginica). Mar Biotechnol (NY) (2013) 0.99
Extensive local gene duplication and functional divergence among paralogs in Atlantic salmon. Genome Biol Evol (2014) 0.88
Mucins as diagnostic and prognostic biomarkers in a fish-parasite model: transcriptional and functional analysis. PLoS One (2013) 0.87
Transcriptome of Atlantic cod (Gadus morhua L.) early embryos from farmed and wild broodstocks. Mar Biotechnol (NY) (2013) 0.84
De novo assembly of mud loach (Misgurnus anguillicaudatus) skin transcriptome to identify putative genes involved in immunity and epidermal mucus secretion. PLoS One (2013) 0.83
De novo transcriptome sequencing of the snail Echinolittorina malaccana: identification of genes responsive to thermal stress and development of genetic markers for population studies. Mar Biotechnol (NY) (2014) 0.82
Transcriptomic Analysis of the Adaptation of Listeria monocytogenes to Growth on Vacuum-Packed Cold Smoked Salmon. Appl Environ Microbiol (2015) 0.79
The Listeria monocytogenes strain 10403S BioCyc database. Database (Oxford) (2015) 0.77
Aeromonas salmonicida binds differentially to mucins isolated from skin and intestinal regions of Atlantic salmon in an N-acetylneuraminic acid-dependent manner. Infect Immun (2014) 0.76
De Novo Assembly and Characterization of Early Embryonic Transcriptome of the Horseshoe Crab Tachypleus tridentatus. PLoS One (2016) 0.75
The developmental transcriptome of contrasting Arctic charr ( Salvelinus alpinus) morphs. F1000Res (2015) 0.75
De novo assembly of the sea trout (Salmo trutta m. trutta) skin transcriptome to identify putative genes involved in the immune response and epidermal mucus secretion. PLoS One (2017) 0.75
Effect of temperature and diet on wound healing in Atlantic salmon (Salmo salar L.). Fish Physiol Biochem (2015) 0.75
Aeromonas salmonicida growth in response to Atlantic salmon mucins differ between epithelial sites, is governed by sialylated and N-acetylhexosamine containing O-glycans and is affected by Ca(2). Infect Immun (2017) 0.75
Basic local alignment search tool. J Mol Biol (1990) 659.07
MEGA5: molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods. Mol Biol Evol (2011) 220.97
A whole-genome assembly of Drosophila. Science (2000) 38.48
The GOA database in 2009--an integrated Gene Ontology Annotation resource. Nucleic Acids Res (2008) 10.21
Rapid transcriptome characterization for a nonmodel organism using 454 pyrosequencing. Mol Ecol (2008) 9.09
Assembly algorithms for next-generation sequencing data. Genomics (2010) 8.56
Next-generation transcriptome assembly. Nat Rev Genet (2011) 5.89
Respiratory tract mucin genes and mucin glycoproteins in health and disease. Physiol Rev (2006) 4.39
High-throughput DNA sequencing--concepts and limitations. Bioessays (2010) 3.77
Structure and function of the polymeric mucins in airways mucus. Annu Rev Physiol (2008) 3.63
Comparing de novo assemblers for 454 transcriptome data. BMC Genomics (2010) 3.49
Applications of next generation sequencing in molecular ecology of non-model organisms. Heredity (Edinb) (2010) 3.22
The Genome Sequencer FLX System--longer reads, more applications, straight forward bioinformatics and more complete data sets. J Biotechnol (2008) 2.89
Development and application of a salmonid EST database and cDNA microarray: data mining and interspecific hybridization characteristics. Genome Res (2004) 2.72
Molecular cloning of human intestinal mucin cDNAs. Sequence analysis and evidence for genetic polymorphism. J Biol Chem (1989) 2.57
Sequencing the genome of the Atlantic salmon (Salmo salar). Genome Biol (2010) 2.06
Aquaculture: global status and trends. Philos Trans R Soc Lond B Biol Sci (2010) 2.02
Structural organization and classification of the human mucin genes. Front Biosci (2001) 1.86
Transcriptome sequencing and de novo analysis for Yesso scallop (Patinopecten yessoensis) using 454 GS FLX. PLoS One (2011) 1.86
A salmonid EST genomic study: genes, duplications, phylogeny and microarrays. BMC Genomics (2008) 1.68
Insights into shell deposition in the Antarctic bivalve Laternula elliptica: gene discovery in the mantle transcriptome using 454 pyrosequencing. BMC Genomics (2010) 1.63
Characterization of the rainbow trout transcriptome using Sanger and 454-pyrosequencing approaches. BMC Genomics (2010) 1.61
Deep sequencing-based transcriptome profiling analysis of bacteria-challenged Lateolabrax japonicus reveals insight into the immune-relevant genes in marine fish. BMC Genomics (2010) 1.60
The next-generation sequencing technology and application. Protein Cell (2010) 1.52
A highly redundant BAC library of Atlantic salmon (Salmo salar): an important tool for salmon projects. BMC Genomics (2005) 1.37
Salmo salar and Esox lucius full-length cDNA sequences reveal changes in evolutionary pressures on a post-tetraploidization genome. BMC Genomics (2010) 1.30
Fish immunity and parasite infections: from innate immunity to immunoprophylactic prospects. Vet Immunol Immunopathol (2008) 1.29
High-throughput sequencing and analysis of the gill tissue transcriptome from the deep-sea hydrothermal vent mussel Bathymodiolus azoricus. BMC Genomics (2010) 1.22
The gastric mucus layers: constituents and regulation of accumulation. Am J Physiol Gastrointest Liver Physiol (2008) 1.17
A novel totivirus and piscine reovirus (PRV) in Atlantic salmon (Salmo salar) with cardiomyopathy syndrome (CMS). Virol J (2010) 1.17
Bioinformatic identification of polymerizing and transmembrane mucins in the puffer fish Fugu rubripes. Glycobiology (2004) 1.17
Annotated expressed sequence tags (ESTs) from pre-smolt Atlantic salmon (Salmo salar) in a searchable data resource. BMC Genomics (2007) 1.10
The transcriptomics of sympatric dwarf and normal lake whitefish (Coregonus clupeaformis spp., Salmonidae) divergence as revealed by next-generation sequencing. Mol Ecol (2010) 1.08
A genetic basis for the phenotypic differentiation between siscowet and lean lake trout (Salvelinus namaycush). Mol Ecol (2010) 1.01
Lectins homologous to those of monocotyledonous plants in the skin mucus and intestine of pufferfish, Fugu rubripes. J Biol Chem (2003) 0.96
Gene expression analyses of immune responses in Atlantic salmon during early stages of infection by salmon louse (Lepeophtheirus salmonis) revealed bi-phasic responses coinciding with the copepod-chalimus transition. BMC Genomics (2011) 0.94
Interferon type I and type II responses in an Atlantic salmon (Salmo salar) SHK-1 cell line by the salmon TRAITS/SGP microarray. Physiol Genomics (2007) 0.93
Evaluation of non-specific immune components from the skin mucus of olive flounder (Paralichthys olivaceus). Fish Shellfish Immunol (2008) 0.92
Molecular cloning and sequencing of a canine tracheobronchial mucin cDNA containing a cysteine-rich domain. Proc Natl Acad Sci U S A (1993) 0.83
Transcriptome analysis in Concholepas concholepas (Gastropoda, Muricidae): mining and characterization of new genomic and molecular markers. Mar Genomics (2011) 0.83
Changes in Atlantic salmon (Salmo salar) epidermal mucus protein composition profiles following infection with sea lice (Lepeophtheirus salmonis). Comp Biochem Physiol Part D Genomics Proteomics (2009) 0.83
The immune response of turbot, Scophthalmus maximus (L.), skin to high water temperature. J Fish Dis (2011) 0.80
The fine structure of the epidermis of two species of salmonid fish, the Atlantic salmon (Salmo salar L.). and the brown trout (Salmo trutta L.) Cell Tissue Res (1975) 0.78
Purification, characterization and molecular cloning of a monocot mannose-binding lectin from Remusatia vivipara with nematicidal activity. Glycoconj J (2010) 0.77
Microbiota of de-novo pediatric IBD: increased Faecalibacterium prausnitzii and reduced bacterial diversity in Crohn's but not in ulcerative colitis. Am J Gastroenterol (2012) 1.54
Profiling of maternal and developmental-stage specific mRNA transcripts in Atlantic halibut Hippoglossus hippoglossus. Gene (2006) 1.12
Invertebrate aquaporins: a review. J Comp Physiol B (2008) 1.11
Transcriptomic responses to functional feeds in Atlantic salmon (Salmo salar). Fish Shellfish Immunol (2011) 1.09
Differential expression patterns of conserved miRNAs and isomiRs during Atlantic halibut development. BMC Genomics (2012) 1.02
Characterization of the B-cell inhibitory protein factor in Ixodes ricinus tick saliva: a potential role in enhanced Borrelia burgdoferi transmission. Immunology (2004) 0.99
Post-translational inhibition of IP-10 secretion in IEC by probiotic bacteria: impact on chronic inflammation. PLoS One (2009) 0.99
Molecular evolution of zebrafish dnmt3 genes and thermal plasticity of their expression during embryonic development. Gene (2012) 0.97
Tick neurobiology: recent advances and the post-genomic era. Invert Neurosci (2007) 0.94
Comparative genomics in teleost species: Knowledge transfer by linking the genomes of model and non-model fish species. Comp Biochem Physiol Part D Genomics Proteomics (2010) 0.94
Functional characterization of a nonmammalian IL-21: rainbow trout Oncorhynchus mykiss IL-21 upregulates the expression of the Th cell signature cytokines IFN-gamma, IL-10, and IL-22. J Immunol (2010) 0.94
Role of an aquaporin in the sheep tick Ixodes ricinus: assessment as a potential control target. Int J Parasitol (2009) 0.93
Multiple tissue transcriptomic responses to Piscirickettsia salmonis in Atlantic salmon (Salmo salar). Physiol Genomics (2011) 0.93
Transcriptional regulation of cytokines in the intestine of Atlantic cod fed yeast derived mannan oligosaccharide or β-glucan and challenged with Vibrio anguillarum. Fish Shellfish Immunol (2012) 0.91
Dietary plant-protein substitution affects hepatic metabolism in rainbow trout (Oncorhynchus mykiss). Br J Nutr (2004) 0.91
Differential expression and biological activity of two piscidin paralogues and a novel splice variant in Atlantic cod (Gadus morhua L.). Fish Shellfish Immunol (2011) 0.90
Transcriptomic and physiological responses to fishmeal substitution with plant proteins in formulated feed in farmed Atlantic salmon (Salmo salar). BMC Genomics (2012) 0.89
Repellent activity of alligator pepper, Aframomum melegueta, and ginger, Zingiber officinale, against the maize weevil, Sitophilus zeamais. Phytochemistry (2009) 0.87
Negative correlation between milk production and brown adipose tissue gene expression in lactating mice. J Exp Biol (2011) 0.87
Application of antimicrobial polypeptide host defenses to aquaculture: Exploitation of downregulation and upregulation responses. Comp Biochem Physiol Part D Genomics Proteomics (2010) 0.87
Proteome reference map of the skin mucus of Atlantic cod (Gadus morhua) revealing immune competent molecules. Fish Shellfish Immunol (2011) 0.87
Characterization of novel precursor miRNAs using next generation sequencing and prediction of miRNA targets in Atlantic halibut. PLoS One (2013) 0.86
Evolution of a multifunctional gene: The warm temperature acclimation protein Wap65 in the European seabass Dicentrarchus labrax. Mol Phylogenet Evol (2009) 0.86
Rainbow trout (Oncorhynchus mykiss) possess multiple novel immunoglobulin-like transcripts containing either an ITAM or ITIMs. Dev Comp Immunol (2008) 0.85
Cortisol modulates the induction of inflammatory gene expression in a rainbow trout macrophage cell line. Fish Shellfish Immunol (2010) 0.84
Expression of growth-related genes in muscle during fasting and refeeding of juvenile Atlantic halibut, Hippoglossus hippoglossus L. Comp Biochem Physiol B Biochem Mol Biol (2008) 0.84
Ixodes ricinus tick salivary gland extract inhibits IL-10 secretion and CD69 expression by mitogen-stimulated murine splenocytes and induces hyporesponsiveness in B lymphocytes. Parasite Immunol (2003) 0.84
Gene-knockdown in the honey bee mite Varroa destructor by a non-invasive approach: studies on a glutathione S-transferase. Parasit Vectors (2010) 0.83
Crustins: enigmatic WAP domain-containing antibacterial proteins from crustaceans. Dev Comp Immunol (2008) 0.83
Ubiquitin E3 ligase atrogin-1 (Fbox-32) in Atlantic salmon (Salmo salar): sequence analysis, genomic structure and modulation of expression. Comp Biochem Physiol B Biochem Mol Biol (2010) 0.83
Incubation temperature induces changes in muscle cellularity and gene expression in Senegalese sole (Solea senegalensis). Gene (2013) 0.83
Two interleukin-17C-like genes exist in rainbow trout Oncorhynchus mykiss that are differentially expressed and modulated. Dev Comp Immunol (2009) 0.82
Photoperiod influences growth and mll (mixed-lineage leukaemia) expression in Atlantic cod. PLoS One (2012) 0.81
Positive selection pressure within teleost Toll-like receptors tlr21 and tlr22 subfamilies and their response to temperature stress and microbial components in zebrafish. Mol Biol Rep (2012) 0.81
A novel beta-defensin antimicrobial peptide in Atlantic cod with stimulatory effect on phagocytic activity. PLoS One (2013) 0.81
Identification, functional characterization and expression patterns of a water-specific aquaporin in the brown dog tick, Rhipicephalus sanguineus. Insect Biochem Mol Biol (2008) 0.81
Diversification of the expanded teleost-specific toll-like receptor family in Atlantic cod, Gadus morhua. BMC Evol Biol (2012) 0.81
Antimicrobial activity in the tissues of Atlantic cod (Gadus morhua L.). Fish Shellfish Immunol (2010) 0.81
Transcriptional responses of resistant and susceptible fish clones to the bacterial pathogen Flavobacterium psychrophilum. PLoS One (2012) 0.81
Establishment of an IFN-gamma specific reporter cell line in fish. Fish Shellfish Immunol (2009) 0.80
Identification of two FoxP3 genes in rainbow trout (Oncorhynchus mykiss) with differential induction patterns. Mol Immunol (2010) 0.80
Posttranslational inhibition of proinflammatory chemokine secretion in intestinal epithelial cells: implications for specific IBD indications. J Clin Gastroenterol (2010) 0.80
MULAN related gene (MRG): a potential novel ubiquitin ligase activator of NF-kB involved in immune response in Atlantic salmon (Salmo salar). Dev Comp Immunol (2012) 0.80
Two copies of the genes encoding the subunits of putative interleukin (IL)-4/IL-13 receptors, IL-4Rα, IL-13Rα1 and IL-13Rα2, have been identified in rainbow trout (Oncorhynchus mykiss) and have complex patterns of expression and modulation. Immunogenetics (2011) 0.80
REMA: A computer-based mapping tool for analysis of restriction sites in multiple DNA sequences. J Microbiol Methods (2007) 0.80
Characterisation of gamma-interferon responsive promoters in fish. Mol Immunol (2008) 0.79
Identification and migration of primordial germ cells in Atlantic salmon, Salmo salar: characterization of vasa, dead end, and lymphocyte antigen 75 genes. Mol Reprod Dev (2013) 0.79
Liver transcriptome changes in zebrafish during acclimation to transport-associated stress. PLoS One (2013) 0.79
Transforming growth factor-β1b: a second TGF-β1 paralogue in the rainbow trout (Oncorhynchus mykiss) that has a lower constitutive expression but is more responsive to immune stimulation. Fish Shellfish Immunol (2012) 0.79
Dietary methylmercury alters the proteome in Atlantic salmon (Salmo salar) kidney. Aquat Toxicol (2011) 0.79
Proteomic profiling of liver from Atlantic salmon (Salmo salar) fed genetically modified soy compared to the near-isogenic non-GM line. Mar Biotechnol (NY) (2009) 0.78
Profiling of the embryonic Atlantic halibut (Hippoglossus hippoglossus L.) transcriptome reveals maternal transcripts as potential markers of embryo quality. BMC Genomics (2014) 0.78
Muscle-specific RING finger (MuRF) cDNAs in Atlantic salmon (Salmo salar) and their role as regulators of muscle protein degradation. Mar Biotechnol (NY) (2011) 0.78
Cloning and expression analysis of the mitochondrial ubiquitin ligase activator of NF-κB (MULAN) in Atlantic salmon (Salmo salar). Mol Immunol (2011) 0.77
Genomic organisation analysis of novel immunoglobulin-like transcripts in Atlantic salmon (Salmo salar) reveals a tightly clustered and multigene family. BMC Genomics (2010) 0.77
The conserved Phe GH5 of importance for hemoglobin intersubunit contact is mutated in gadoid fish. BMC Evol Biol (2014) 0.76
Acclimation of zebrafish to transport stress. Zebrafish (2013) 0.76
Glutamine synthetase activity and the expression of three glul paralogues in zebrafish during transport. Comp Biochem Physiol B Biochem Mol Biol (2012) 0.76
Protein profiling in the gut of Penaeus monodon gavaged with oral WSSV-vaccines and live white spot syndrome virus. Proteomics (2014) 0.76
Isolation and characterization of a novel simazine-degrading bacterium from agricultural soil of central Chile, Pseudomonas sp. MHP41. FEMS Microbiol Lett (2008) 0.76
Hydroxylysyl pyridinoline cross-link concentration affects the textural properties of fresh and smoked Atlantic salmon (Salmo salar L.) flesh. J Agric Food Chem (2005) 0.76
Ubiquitous presence of piscidin-1 in Atlantic cod as evidenced by immunolocalisation. BMC Vet Res (2012) 0.76
Investigations on the effects of growth rate and dietary vitamin C on skeletal muscle collagen and hydroxylysyl pyridinoline cross-link concentration in farmed Atlantic salmon (Salmo salar). J Agric Food Chem (2007) 0.75
Corrigendum: Disparate developmental patterns of immune responses to bacterial and viral infections in fish. Sci Rep (2016) 0.75
Marine n-3 fatty acids alter the proteomic response to methylmercury in Atlantic salmon kidney (ASK) cells. Aquat Toxicol (2011) 0.75
Nucleotide enrichment of live feed: a promising protocol for rearing of Atlantic cod Gadus morhua larvae. Mar Biotechnol (NY) (2012) 0.75
Influence of photoperiod on expression of DNA (cytosine-5) methyltransferases in Atlantic cod. Gene (2013) 0.75
Frontiers in parasite neurobiology: parasite genomics, neural signalling and new targets for control. Invert Neurosci (2007) 0.75
Rearing temperature affects Senegalese sole (Solea senegalensis) larvae protein metabolic capacity. Fish Physiol Biochem (2013) 0.75
Localization and functional properties of two galectin-1 proteins in Atlantic cod (Gadus morhua) mucosal tissues. Dev Comp Immunol (2013) 0.75
Factors influencing the long-term dynamics of larval sea lice density at east and west coast locations in Scotland. Dis Aquat Organ (2017) 0.75
In vitro and ex vivo models indicate that the molecular clock in fast skeletal muscle of Atlantic cod is not autonomous. Mol Biol Rep (2014) 0.75