PubRank

Paul W Sternberg

Author PubWeight™ 249.11‹?›

Top papers

Rank Title Journal Year PubWeight™‹?›
1 Textpresso: an ontology-based information retrieval and extraction system for biological literature. PLoS Biol 2004 15.72
2 WormBase: better software, richer content. Nucleic Acids Res 2006 6.78
3 WormBase: a comprehensive resource for nematode research. Nucleic Acids Res 2009 5.20
4 The neuroscience information framework: a data and knowledge environment for neuroscience. Neuroinformatics 2008 4.60
5 Genome-wide prediction of C. elegans genetic interactions. Science 2006 4.15
6 WormBase: a multi-species resource for nematode biology and genomics. Nucleic Acids Res 2004 4.14
7 WormBase: new content and better access. Nucleic Acids Res 2006 4.01
8 Federated access to heterogeneous information resources in the Neuroscience Information Framework (NIF). Neuroinformatics 2008 3.94
9 WormBase 2012: more genomes, more data, new website. Nucleic Acids Res 2011 3.87
10 WormBase: a comprehensive data resource for Caenorhabditis biology and genomics. Nucleic Acids Res 2005 3.82
11 WormBase 2007. Nucleic Acids Res 2007 3.69
12 A blend of small molecules regulates both mating and development in Caenorhabditis elegans. Nature 2008 3.45
13 Automatic document classification of biological literature. BMC Bioinformatics 2006 3.27
14 A C. elegans stretch receptor neuron revealed by a mechanosensitive TRP channel homologue. Nature 2006 3.20
15 Lensless high-resolution on-chip optofluidic microscopes for Caenorhabditis elegans and cell imaging. Proc Natl Acad Sci U S A 2008 2.88
16 Optofluidic microscopy--a method for implementing a high resolution optical microscope on a chip. Lab Chip 2006 2.80
17 FOS-1 promotes basement-membrane removal during anchor-cell invasion in C. elegans. Cell 2005 2.77
18 Semi-automated curation of protein subcellular localization: a text mining-based approach to Gene Ontology (GO) Cellular Component curation. BMC Bioinformatics 2009 2.74
19 A C. elegans model of nicotine-dependent behavior: regulation by TRP-family channels. Cell 2006 2.68
20 A shortcut to identifying small molecule signals that regulate behavior and development in Caenorhabditis elegans. Proc Natl Acad Sci U S A 2009 2.64
21 RNA Pol II accumulates at promoters of growth genes during developmental arrest. Science 2009 2.63
22 An automated system for measuring parameters of nematode sinusoidal movement. BMC Genet 2005 2.57
23 Textpresso for neuroscience: searching the full text of thousands of neuroscience research papers. Neuroinformatics 2008 2.39
24 WormBase 2014: new views of curated biology. Nucleic Acids Res 2013 2.39
25 A modular library of small molecule signals regulates social behaviors in Caenorhabditis elegans. PLoS Biol 2012 2.38
26 C. elegans LIN-18 is a Ryk ortholog and functions in parallel to LIN-17/Frizzled in Wnt signaling. Cell 2004 2.35
27 DAF-16/FOXO regulates transcription of cki-1/Cip/Kip and repression of lin-4 during C. elegans L1 arrest. Curr Biol 2006 2.33
28 A unified nomenclature for protein subunits of mediator complexes linking transcriptional regulators to RNA polymerase II. Mol Cell 2004 2.27
29 Anchor cell invasion into the vulval epithelium in C. elegans. Dev Cell 2003 2.23
30 Ascaris suum draft genome. Nature 2011 2.16
31 Ascaroside signaling is widely conserved among nematodes. Curr Biol 2012 2.15
32 Overview of the Alliance for Cellular Signaling. Nature 2002 2.15
33 Acute carbon dioxide avoidance in Caenorhabditis elegans. Proc Natl Acad Sci U S A 2008 1.97
34 Transgene-free genome editing in Caenorhabditis elegans using CRISPR-Cas. Genetics 2013 1.95
35 Ror receptor tyrosine kinases: orphans no more. Trends Cell Biol 2008 1.82
36 An imaging system for standardized quantitative analysis of C. elegans behavior. BMC Bioinformatics 2004 1.81
37 Epidermal growth factor signaling induces behavioral quiescence in Caenorhabditis elegans. Nat Neurosci 2007 1.74
38 Scaffolding a Caenorhabditis nematode genome with RNA-seq. Genome Res 2010 1.73
39 WormBook: the online review of Caenorhabditis elegans biology. Nucleic Acids Res 2006 1.71
40 Comparative metabolomics reveals biogenesis of ascarosides, a modular library of small-molecule signals in C. elegans. J Am Chem Soc 2012 1.70
41 Opposing Wnt pathways orient cell polarity during organogenesis. Cell 2008 1.70
42 Worm Phenotype Ontology: integrating phenotype data within and beyond the C. elegans community. BMC Bioinformatics 2011 1.69
43 Evidence of a mate-finding cue in the hermaphrodite nematode Caenorhabditis elegans. Proc Natl Acad Sci U S A 2002 1.68
44 Metazoan operons accelerate recovery from growth-arrested states. Cell 2011 1.64
45 The L-type cyclin CYL-1 and the heat-shock-factor HSF-1 are required for heat-shock-induced protein expression in Caenorhabditis elegans. Genetics 2004 1.64
46 Conservation rules, their breakdown, and optimality in Caenorhabditis sinusoidal locomotion. J Theor Biol 2006 1.64
47 Systems level circuit model of C. elegans undulatory locomotion: mathematical modeling and molecular genetics. J Comput Neurosci 2007 1.63
48 SynMuv genes redundantly inhibit lin-3/EGF expression to prevent inappropriate vulval induction in C. elegans. Dev Cell 2006 1.61
49 Issues in the design of a pilot concept-based query interface for the neuroinformatics information framework. Neuroinformatics 2008 1.53
50 Automated data integration for developmental biological research. Development 2007 1.51
51 A sensory code for host seeking in parasitic nematodes. Curr Biol 2011 1.47
52 Receptor-type guanylate cyclase is required for carbon dioxide sensation by Caenorhabditis elegans. Proc Natl Acad Sci U S A 2010 1.42
53 Genome annotation by high-throughput 5' RNA end determination. Proc Natl Acad Sci U S A 2004 1.42
54 Nematodes, bacteria, and flies: a tripartite model for nematode parasitism. Curr Biol 2007 1.42
55 Caenorhabditis elegans Galphaq regulates egg-laying behavior via a PLCbeta-independent and serotonin-dependent signaling pathway and likely functions both in the nervous system and in muscle. Genetics 2003 1.39
56 The genome and developmental transcriptome of the strongylid nematode Haemonchus contortus. Genome Biol 2013 1.37
57 Tissue-specific regulation of the LIM homeobox gene lin-11 during development of the Caenorhabditis elegans egg-laying system. Dev Biol 2002 1.37
58 Toward an interactive article: integrating journals and biological databases. BMC Bioinformatics 2011 1.37
59 Ascaroside expression in Caenorhabditis elegans is strongly dependent on diet and developmental stage. PLoS One 2011 1.35
60 A C. elegans sperm TRP protein required for sperm-egg interactions during fertilization. Cell 2003 1.34
61 Caenorhabditis elegans cog-1 locus encodes GTX/Nkx6.1 homeodomain proteins and regulates multiple aspects of reproductive system development. Dev Biol 2002 1.32
62 An entomopathogenic nematode by any other name. PLoS Pathog 2012 1.32
63 The C. elegans ROR receptor tyrosine kinase, CAM-1, non-autonomously inhibits the Wnt pathway. Development 2007 1.30
64 A cell-specific enhancer that specifies lin-3 expression in the C. elegans anchor cell for vulval development. Development 2003 1.28
65 cis-Regulatory control of three cell fate-specific genes in vulval organogenesis of Caenorhabditis elegans and C. briggsae. Dev Biol 2003 1.28
66 Automatic categorization of diverse experimental information in the bioscience literature. BMC Bioinformatics 2012 1.27
67 Olfaction shapes host-parasite interactions in parasitic nematodes. Proc Natl Acad Sci U S A 2012 1.25
68 A practical, bioinformatic workflow system for large data sets generated by next-generation sequencing. Nucleic Acids Res 2010 1.22
69 Caenorhabditis elegans inositol 5-phosphatase homolog negatively regulates inositol 1,4,5-triphosphate signaling in ovulation. Mol Biol Cell 2002 1.20
70 The small ubiquitin-like modifier (SUMO) is required for gonadal and uterine-vulval morphogenesis in Caenorhabditis elegans. Genes Dev 2004 1.20
71 Genetic dissection of developmental pathways. WormBook 2006 1.19
72 Transcriptional network underlying Caenorhabditis elegans vulval development. Proc Natl Acad Sci U S A 2005 1.19
73 Text mining in the biocuration workflow: applications for literature curation at WormBase, dictyBase and TAIR. Database (Oxford) 2012 1.19
74 The epidermal growth factor system in Caenorhabditis elegans. Exp Cell Res 2003 1.15
75 The versatile worm: genetic and genomic resources for Caenorhabditis elegans research. Nat Rev Genet 2007 1.14
76 The draft genome sequence of the nematode Caenorhabditis briggsae, a companion to C. elegans. Genome Biol 2003 1.14
77 Massively parallel sequencing and analysis of the Necator americanus transcriptome. PLoS Negl Trop Dis 2010 1.12
78 A lover and a fighter: the genome sequence of an entomopathogenic nematode Heterorhabditis bacteriophora. PLoS One 2013 1.11
79 Targeted metabolomics reveals a male pheromone and sex-specific ascaroside biosynthesis in Caenorhabditis elegans. ACS Chem Biol 2012 1.11
80 Gene expression markers for Caenorhabditis elegans vulval cells. Mech Dev 2002 1.10
81 Sex-specific mating pheromones in the nematode Panagrellus redivivus. Proc Natl Acad Sci U S A 2012 1.10
82 Postembryonic RNAi in Heterorhabditis bacteriophora: a nematode insect parasite and host for insect pathogenic symbionts. BMC Dev Biol 2007 1.09
83 A component of the transcriptional mediator complex inhibits RAS-dependent vulval fate specification in C. elegans. Development 2003 1.08
84 C. elegans EVI1 proto-oncogene, EGL-43, is necessary for Notch-mediated cell fate specification and regulates cell invasion. Development 2007 1.07
85 Nematode-bacterium symbioses--cooperation and conflict revealed in the "omics" age. Biol Bull 2012 1.05
86 Phospholipase Cepsilon regulates ovulation in Caenorhabditis elegans. Dev Biol 2004 1.05
87 The C. elegans LIM homeobox gene lin-11 specifies multiple cell fates during vulval development. Development 2003 1.05
88 Sensitive and precise quantification of insulin-like mRNA expression in Caenorhabditis elegans. PLoS One 2011 1.04
89 The draft genome and transcriptome of Panagrellus redivivus are shaped by the harsh demands of a free-living lifestyle. Genetics 2013 1.04
90 Differences in transcription between free-living and CO2-activated third-stage larvae of Haemonchus contortus. BMC Genomics 2010 1.02
91 The NK-2 class homeodomain factor CEH-51 and the T-box factor TBX-35 have overlapping function in C. elegans mesoderm development. Development 2009 1.01
92 Initiation of male sperm-transfer behavior in Caenorhabditis elegans requires input from the ventral nerve cord. BMC Biol 2006 1.01
93 Genetic analysis of dauer formation in Caenorhabditis briggsae. Genetics 2007 1.00
94 Intercellular coupling amplifies fate segregation during Caenorhabditis elegans vulval development. Proc Natl Acad Sci U S A 2006 1.00
95 Wide and scalable field-of-view Talbot-grid-based fluorescence microscopy. Opt Lett 2012 0.99
96 Succinylated octopamine ascarosides and a new pathway of biogenic amine metabolism in Caenorhabditis elegans. J Biol Chem 2013 0.99
97 The Caenorhabditis elegans vulva: a post-embryonic gene regulatory network controlling organogenesis. Proc Natl Acad Sci U S A 2008 0.99
98 Caenorhabditis elegans UNC-103 ERG-like potassium channel regulates contractile behaviors of sex muscles in males before and during mating. J Neurosci 2003 0.99
99 Evolution of a polymodal sensory response network. BMC Biol 2008 0.98
100 Transcriptional profiling of trait deterioration in the insect pathogenic nematode Heterorhabditis bacteriophora. BMC Genomics 2009 0.98
101 Building a cell and anatomy ontology of Caenorhabditis elegans. Comp Funct Genomics 2003 0.97
102 Systematic profiling of Caenorhabditis elegans locomotive behaviors reveals additional components in G-protein Gαq signaling. Proc Natl Acad Sci U S A 2013 0.97
103 Paired and LIM class homeodomain proteins coordinate differentiation of the C. elegans ALA neuron. Development 2010 0.97
104 Nematode-trapping fungi eavesdrop on nematode pheromones. Curr Biol 2012 0.96
105 Genomic-bioinformatic analysis of transcripts enriched in the third-stage larva of the parasitic nematode Ascaris suum. PLoS Negl Trop Dis 2008 0.95
106 Hormonal signal amplification mediates environmental conditions during development and controls an irreversible commitment to adulthood. PLoS Biol 2012 0.94
107 Distinct roles of transcription factors EGL-46 and DAF-19 in specifying the functionality of a polycystin-expressing sensory neuron necessary for C. elegans male vulva location behavior. Development 2003 0.94
108 Entomopathogenic nematodes. Curr Biol 2012 0.93
109 Structural and functional characterisation of the fork head transcription factor-encoding gene, Hc-daf-16, from the parasitic nematode Haemonchus contortus (Strongylida). Int J Parasitol 2009 0.92
110 Transfer characteristics of a thermosensory synapse in Caenorhabditis elegans. Proc Natl Acad Sci U S A 2011 0.92
111 The tailless ortholog nhr-67 regulates patterning of gene expression and morphogenesis in the C. elegans vulva. PLoS Genet 2007 0.91
112 Dissection of cis-regulatory elements in the C. elegans Hox gene egl-5 promoter. Dev Biol 2004 0.91
113 WormBase: Annotating many nematode genomes. Worm 2012 0.91
114 Visualization of C. elegans transgenic arrays by GFP. BMC Genet 2006 0.89
115 Multigenome DNA sequence conservation identifies Hox cis-regulatory elements. Genome Res 2008 0.89
116 Sensory processing by neural circuits in Caenorhabditis elegans. Curr Opin Neurobiol 2004 0.88
117 Identification of residues of the Caenorhabditis elegans LIN-1 ETS domain that are necessary for DNA binding and regulation of vulval cell fates. Genetics 2004 0.88
118 Functional transcriptomics of a migrating cell in Caenorhabditis elegans. Proc Natl Acad Sci U S A 2012 0.87
119 Morphogenesis of the vulva and the vulval-uterine connection. WormBook 2012 0.87
120 Deep insights into Dictyocaulus viviparus transcriptomes provides unique prospects for new drug targets and disease intervention. Biotechnol Adv 2010 0.86
121 Modulation of EGF receptor-mediated vulva development by the heterotrimeric G-protein Galphaq and excitable cells in C. elegans. Development 2003 0.86
122 The C. elegans tailless/Tlx homolog nhr-67 regulates a stage-specific program of linker cell migration in male gonadogenesis. Development 2009 0.86
123 Predicting phenotypic diversity and the underlying quantitative molecular transitions. PLoS Comput Biol 2009 0.86
124 Evolutionary conservation of cell migration genes: from nematode neurons to vertebrate neural crest. Genes Dev 2007 0.86
125 A comparison of experience-dependent locomotory behaviors and biogenic amine neurons in nematode relatives of Caenorhabditis elegans. BMC Neurosci 2010 0.85
126 C. elegans BED domain transcription factor BED-3 controls lineage-specific cell proliferation during organogenesis. Dev Biol 2009 0.85
127 Gender-enriched transcripts in Haemonchus contortus--predicted functions and genetic interactions based on comparative analyses with Caenorhabditis elegans. Int J Parasitol 2007 0.85
128 Wnt and EGF pathways act together to induce C. elegans male hook development. Dev Biol 2008 0.85
129 Atypical (RIO) protein kinases from Haemonchus contortus--promise as new targets for nematocidal drugs. Biotechnol Adv 2011 0.84
130 The cGMP signaling pathway affects feeding behavior in the necromenic nematode Pristionchus pacificus. PLoS One 2012 0.83
131 Expressed sequence tag analysis of gene representation in insect parasitic nematode Heterorhabditis bacteriophora. J Parasitol 2007 0.83
132 Origin and evolution of dishevelled. G3 (Bethesda) 2013 0.83
133 Transcriptomic analysis of the entomopathogenic nematode Heterorhabditis bacteriophora TTO1. BMC Genomics 2009 0.83
134 Extracellular domain determinants of LET-23 (EGF) receptor tyrosine kinase activity in Caenorhabditis elegans. Oncogene 2003 0.82
135 Mitochondrial genomes of Trichinella species and genotypes – a basis for diagnosis, and systematic and epidemiological explorations. Int J Parasitol 2014 0.82
136 A white paper on nematode comparative genomics. J Nematol 2005 0.82
137 Getting the most out of parasitic helminth transcriptomes using HelmDB: implications for biology and biotechnology. Biotechnol Adv 2012 0.82
138 Protein kinase VRK-1 regulates cell invasion and EGL-17/FGF signaling in Caenorhabditis elegans. Dev Biol 2009 0.81
139 Synaptic polarity of the interneuron circuit controlling C. elegans locomotion. Front Comput Neurosci 2013 0.81
140 Coordination of opposing sex-specific and core muscle groups regulates male tail posture during Caenorhabditis elegans male mating behavior. BMC Biol 2009 0.80
141 Incorporating genomics into the toolkit of nematology. J Nematol 2012 0.80
142 The LIN-15A and LIN-56 transcriptional regulators interact to negatively regulate EGF/Ras signaling in Caenorhabditis elegans vulval cell-fate determination. Genetics 2010 0.80
143 FGF signaling regulates Wnt ligand expression to control vulval cell lineage polarity in C. elegans. Development 2013 0.79
144 Tv-RIO1 - an atypical protein kinase from the parasitic nematode Trichostrongylus vitrinus. Parasit Vectors 2008 0.79
145 A modified mole cricket lure and description of Scapteriscus borellii (Orthoptera: Gryllotalpidae) range expansion and calling song in California. Environ Entomol 2014 0.78
146 Transcription factor redundancy and tissue-specific regulation: evidence from functional and physical network connectivity. Genome Res 2012 0.78
147 NilD CRISPR RNA contributes to Xenorhabdus nematophila colonization of symbiotic host nematodes. Mol Microbiol 2014 0.78
148 Gene expression markers for Caenorhabditis elegans vulval cells. Gene Expr Patterns 2002 0.78
149 An activating mutation in sos-1 identifies its Dbl domain as a critical inhibitor of the epidermal growth factor receptor pathway during Caenorhabditis elegans vulval development. Mol Cell Biol 2007 0.78
150 sli-3 negatively regulates the LET-23/epidermal growth factor receptor-mediated vulval induction pathway in Caenorhabditis elegans. Genetics 2006 0.77
151 Elucidating ANTs in worms using genomic and bioinformatic tools--biotechnological prospects? Biotechnol Adv 2009 0.77
152 Insights into the immuno-molecular biology of Angiostrongylus vasorum through transcriptomics--prospects for new interventions. Biotechnol Adv 2013 0.77
153 Re-programming of C. elegans male epidermal precursor fates by Wnt, Hox, and LIN-12/Notch activities. Dev Biol 2010 0.77
154 GSA Launches G3: Genes | Genomes | Genetics. G3 (Bethesda) 2011 0.76
155 Identification of DVA interneuron regulatory sequences in Caenorhabditis elegans. PLoS One 2013 0.76
156 Pristionchus pacificus: an appropriate fondness for beetles. Nat Genet 2008 0.75
157 The roles of EGF and Wnt signaling during patterning of the C. elegans Bgamma/delta Equivalence Group. BMC Dev Biol 2009 0.75
158 Paul W. Sternberg. Curr Biol 2013 0.75
159 Searching WormBase for information about Caenorhabditis elegans. Curr Protoc Bioinformatics 2006 0.75
160 Erratum: the genome and transcriptome of the zoonotic hookworm Ancylostoma ceylanicum identify infection-specific gene families. Nat Genet 2015 0.75
161 G3, GENETICS, and the GSA: Two Journals, One Mission. Genetics 2011 0.75
162 G3, GENETICS, and the GSA: Two Journals, One Mission. G3 (Bethesda) 2011 0.75
163 A vacuolar-type proton (H+) translocating ATPase alpha subunit encoded by the Hc-vha-6 gene of Haemonchus contortus. Mol Cell Probes 2010 0.75