Published in Nucleic Acids Res on November 29, 2012
PATRIC, the bacterial bioinformatics database and analysis resource. Nucleic Acids Res (2013) 7.63
A draft map of the human proteome. Nature (2014) 6.58
2016 update of the PRIDE database and its related tools. Nucleic Acids Res (2015) 5.14
MEROPS: the database of proteolytic enzymes, their substrates and inhibitors. Nucleic Acids Res (2013) 3.28
Pathogens and host immunity in the ancient human oral cavity. Nat Genet (2014) 3.19
Expression Atlas update--a database of gene and transcript expression from microarray- and sequencing-based functional genomics experiments. Nucleic Acids Res (2013) 2.97
Targeted peptide measurements in biology and medicine: best practices for mass spectrometry-based assay development using a fit-for-purpose approach. Mol Cell Proteomics (2014) 2.37
Proteomic comparison defines novel markers to characterize heterogeneous populations of extracellular vesicle subtypes. Proc Natl Acad Sci U S A (2016) 1.97
The quantitative and condition-dependent Escherichia coli proteome. Nat Biotechnol (2015) 1.83
The European Genome-phenome Archive of human data consented for biomedical research. Nat Genet (2015) 1.70
The functional interactome landscape of the human histone deacetylase family. Mol Syst Biol (2013) 1.63
Alterations in the interactome of serine/threonine protein phosphatase type-1 in atrial fibrillation patients. J Am Coll Cardiol (2015) 1.57
Demonstrating the feasibility of large-scale development of standardized assays to quantify human proteins. Nat Methods (2013) 1.54
In-vivo quantitative proteomics reveals a key contribution of post-transcriptional mechanisms to the circadian regulation of liver metabolism. PLoS Genet (2014) 1.54
Expression Atlas update-an integrated database of gene and protein expression in humans, animals and plants. Nucleic Acids Res (2015) 1.53
Comparative Analysis of Label-Free and 8-Plex iTRAQ Approach for Quantitative Tissue Proteomic Analysis. PLoS One (2015) 1.50
A screen for hydroxymethylcytosine and formylcytosine binding proteins suggests functions in transcription and chromatin regulation. Genome Biol (2013) 1.50
Toward more transparent and reproducible omics studies through a common metadata checklist and data publications. OMICS (2014) 1.49
Genome-wide mapping of transcriptional start sites defines an extensive leaderless transcriptome in Mycobacterium tuberculosis. Cell Rep (2013) 1.48
From Peptidome to PRIDE: public proteomics data migration at a large scale. Proteomics (2013) 1.46
Protein synthesis rate is the predominant regulator of protein expression during differentiation. Mol Syst Biol (2013) 1.46
Characterization of individual mouse cerebrospinal fluid proteomes. Proteomics (2014) 1.44
Making proteomics data accessible and reusable: current state of proteomics databases and repositories. Proteomics (2015) 1.44
Social network architecture of human immune cells unveiled by quantitative proteomics. Nat Immunol (2017) 1.41
Comprehensive analysis of temporal alterations in cellular proteome of Bacillus subtilis under curcumin treatment. PLoS One (2015) 1.39
Intact Cell MALDI-TOF MS on Sperm: A Molecular Test For Male Fertility Diagnosis. Mol Cell Proteomics (2016) 1.39
Phycobilisomes supply excitations to both photosystems in a megacomplex in cyanobacteria. Science (2013) 1.37
Acetylation dynamics and stoichiometry in Saccharomyces cerevisiae. Mol Syst Biol (2014) 1.35
An update on LNCipedia: a database for annotated human lncRNA sequences. Nucleic Acids Res (2014) 1.34
Plasma Proteome Database as a resource for proteomics research: 2014 update. Nucleic Acids Res (2013) 1.34
Glycoproteomic analysis of prostate cancer tissues by SWATH mass spectrometry discovers N-acylethanolamine acid amidase and protein tyrosine kinase 7 as signatures for tumor aggressiveness. Mol Cell Proteomics (2014) 1.33
A repository of assays to quantify 10,000 human proteins by SWATH-MS. Sci Data (2014) 1.32
Quantitative dissection and stoichiometry determination of the human SET1/MLL histone methyltransferase complexes. Mol Cell Biol (2013) 1.27
Mistargeted mitochondrial proteins activate a proteostatic response in the cytosol. Nature (2015) 1.23
Rapid mass spectrometric conversion of tissue biopsy samples into permanent quantitative digital proteome maps. Nat Med (2015) 1.22
Small cationic antimicrobial peptides delocalize peripheral membrane proteins. Proc Natl Acad Sci U S A (2014) 1.22
Identification of downstream components of ubiquitin-conjugating enzyme PHOSPHATE2 by quantitative membrane proteomics in Arabidopsis roots. Plant Cell (2013) 1.19
Polysome profiling reveals translational control of gene expression in the human malaria parasite Plasmodium falciparum. Genome Biol (2013) 1.18
The European Bioinformatics Institute's data resources 2014. Nucleic Acids Res (2013) 1.17
A meta-analysis of the genomic and transcriptomic composition of complex life. Cell Cycle (2013) 1.16
Studies of mucus in mouse stomach, small intestine, and colon. II. Gastrointestinal mucus proteome reveals Muc2 and Muc5ac accompanied by a set of core proteins. Am J Physiol Gastrointest Liver Physiol (2013) 1.16
Updates to BioSamples database at European Bioinformatics Institute. Nucleic Acids Res (2013) 1.14
Stepwise evolution of essential centromere function in a Drosophila neogene. Science (2013) 1.13
The effect of tRNA levels on decoding times of mRNA codons. Nucleic Acids Res (2014) 1.12
Metastatic castration-resistant prostate cancer reveals intrapatient similarity and interpatient heterogeneity of therapeutic kinase targets. Proc Natl Acad Sci U S A (2013) 1.12
DNA repair in Mycoplasma gallisepticum. BMC Genomics (2013) 1.12
Large oncosomes contain distinct protein cargo and represent a separate functional class of tumor-derived extracellular vesicles. Oncotarget (2015) 1.12
Integrin endosomal signalling suppresses anoikis. Nat Cell Biol (2015) 1.11
Mapping gene activity of Arabidopsis root hairs. Genome Biol (2013) 1.10
Proteomic differences between hepatocellular carcinoma and nontumorous liver tissue investigated by a combined gel-based and label-free quantitative proteomics study. Mol Cell Proteomics (2013) 1.09
MOPED 2.5--an integrated multi-omics resource: multi-omics profiling expression database now includes transcriptomics data. OMICS (2014) 1.09
Mass spectrometry of human leukocyte antigen class I peptidomes reveals strong effects of protein abundance and turnover on antigen presentation. Mol Cell Proteomics (2015) 1.08
Accurate protein complex retrieval by affinity enrichment mass spectrometry (AE-MS) rather than affinity purification mass spectrometry (AP-MS). Mol Cell Proteomics (2014) 1.07
Identification of telomere-associated molecules by engineered DNA-binding molecule-mediated chromatin immunoprecipitation (enChIP). Sci Rep (2013) 1.07
Arabidopsis nanodomain-delimited ABA signaling pathway regulates the anion channel SLAH3. Proc Natl Acad Sci U S A (2013) 1.06
Spider genomes provide insight into composition and evolution of venom and silk. Nat Commun (2014) 1.06
Annotating N termini for the human proteome project: N termini and Nα-acetylation status differentiate stable cleaved protein species from degradation remnants in the human erythrocyte proteome. J Proteome Res (2014) 1.05
High-confidence glycosome proteome for procyclic form Trypanosoma brucei by epitope-tag organelle enrichment and SILAC proteomics. J Proteome Res (2014) 1.04
A mass spectrometric-derived cell surface protein atlas. PLoS One (2015) 1.04
Oncogenic KRAS Regulates Tumor Cell Signaling via Stromal Reciprocation. Cell (2016) 1.04
Comprehensive absolute quantification of the cytosolic proteome of Bacillus subtilis by data independent, parallel fragmentation in liquid chromatography/mass spectrometry (LC/MS(E)). Mol Cell Proteomics (2014) 1.03
DeMix workflow for efficient identification of cofragmented peptides in high resolution data-dependent tandem mass spectrometry. Mol Cell Proteomics (2014) 1.02
Definition of a consensus integrin adhesome and its dynamics during adhesion complex assembly and disassembly. Nat Cell Biol (2015) 1.02
Analysis of acetylation stoichiometry suggests that SIRT3 repairs nonenzymatic acetylation lesions. EMBO J (2015) 1.01
The human uterine smooth muscle S-nitrosoproteome fingerprint in pregnancy, labor, and preterm labor. Am J Physiol Cell Physiol (2013) 1.01
Open source libraries and frameworks for mass spectrometry based proteomics: a developer's perspective. Biochim Biophys Acta (2013) 1.00
Accurate label-free protein quantitation with high- and low-resolution mass spectrometers. J Proteome Res (2013) 1.00
Host-centric proteomics of stool: a novel strategy focused on intestinal responses to the gut microbiota. Mol Cell Proteomics (2013) 1.00
Anatomical heterogeneity of tendon: Fascicular and interfascicular tendon compartments have distinct proteomic composition. Sci Rep (2016) 1.00
Retinoic acid receptor alpha is associated with tamoxifen resistance in breast cancer. Nat Commun (2013) 0.99
Integrated Bio-Search: challenges and trends for the integration, search and comprehensive processing of biological information. BMC Bioinformatics (2014) 0.98
Proteome and phosphoproteome characterization reveals new response and defense mechanisms of Brachypodium distachyon leaves under salt stress. Mol Cell Proteomics (2013) 0.97
ROCK1 is a potential combinatorial drug target for BRAF mutant melanoma. Mol Syst Biol (2014) 0.97
Circadian control of oscillations in mitochondrial rate-limiting enzymes and nutrient utilization by PERIOD proteins. Proc Natl Acad Sci U S A (2016) 0.97
Protein acetylation affects acetate metabolism, motility and acid stress response in Escherichia coli. Mol Syst Biol (2014) 0.97
Proteomics of a fuzzy organelle: interphase chromatin. EMBO J (2014) 0.96
Quantitative proteomics of the yeast Hsp70/Hsp90 interactomes during DNA damage reveal chaperone-dependent regulation of ribonucleotide reductase. J Proteomics (2014) 0.96
Long Non-Coding RNA BST2/BISPR is Induced by IFN and Regulates the Expression of the Antiviral Factor Tetherin. Front Immunol (2015) 0.96
Single-step enrichment by Ti4+-IMAC and label-free quantitation enables in-depth monitoring of phosphorylation dynamics with high reproducibility and temporal resolution. Mol Cell Proteomics (2014) 0.96
Large-scale determination of absolute phosphorylation stoichiometries in human cells by motif-targeting quantitative proteomics. Nat Commun (2015) 0.95
A CEP215-HSET complex links centrosomes with spindle poles and drives centrosome clustering in cancer. Nat Commun (2016) 0.95
Global absolute quantification reveals tight regulation of protein expression in single Xenopus eggs. Nucleic Acids Res (2014) 0.95
The SIB Swiss Institute of Bioinformatics' resources: focus on curated databases. Nucleic Acids Res (2015) 0.95
TAILS N-terminomics of human platelets reveals pervasive metalloproteinase-dependent proteolytic processing in storage. Blood (2014) 0.95
Large-Scale Targeted Proteomics Using Internal Standard Triggered-Parallel Reaction Monitoring (IS-PRM). Mol Cell Proteomics (2015) 0.94
Adenovirus composition, proteolysis, and disassembly studied by in-depth qualitative and quantitative proteomics. J Biol Chem (2014) 0.94
A fast Peptide Match service for UniProt Knowledgebase. Bioinformatics (2013) 0.94
Phosphoproteomic screening identifies Rab GTPases as novel downstream targets of PINK1. EMBO J (2015) 0.94
Copy number analysis of the murine platelet proteome spanning the complete abundance range. Mol Cell Proteomics (2014) 0.94
Quantitative phosphoproteomics reveals the role of protein arginine phosphorylation in the bacterial stress response. Mol Cell Proteomics (2013) 0.94
Proteogenomic analysis of psoriasis reveals discordant and concordant changes in mRNA and protein abundance. Genome Med (2015) 0.93
Evolutionary Events Associated with an Outbreak of Meningococcal Disease in Men Who Have Sex with Men. PLoS One (2016) 0.93
Selective targeting of the cysteine proteome by thioredoxin and glutathione redox systems. Mol Cell Proteomics (2013) 0.93
The Risa R/Bioconductor package: integrative data analysis from experimental metadata and back again. BMC Bioinformatics (2014) 0.93
The PhoP-dependent ncRNA Mcr7 modulates the TAT secretion system in Mycobacterium tuberculosis. PLoS Pathog (2014) 0.93
Baseline Immunoglobulin E Levels as a Marker of Doxorubicin- and Trastuzumab-Associated Cardiac Dysfunction. Circ Res (2016) 0.93
Heterogeneity of pancreatic cancer metastases in a single patient revealed by quantitative proteomics. Mol Cell Proteomics (2014) 0.93
Rapid temporal dynamics of transcription, protein synthesis, and secretion during macrophage activation. Mol Cell Proteomics (2014) 0.93
Glomerular cell cross-talk influences composition and assembly of extracellular matrix. J Am Soc Nephrol (2014) 0.93
A PWWP domain-containing protein targets the NuA3 acetyltransferase complex via histone H3 lysine 36 trimethylation to coordinate transcriptional elongation at coding regions. Mol Cell Proteomics (2014) 0.92
The distributed annotation system. BMC Bioinformatics (2001) 42.98
COSMIC: mining complete cancer genomes in the Catalogue of Somatic Mutations in Cancer. Nucleic Acids Res (2010) 25.55
Reorganizing the protein space at the Universal Protein Resource (UniProt). Nucleic Acids Res (2011) 18.50
Ensembl 2012. Nucleic Acids Res (2011) 14.55
InterPro in 2011: new developments in the family and domain prediction database. Nucleic Acids Res (2011) 13.45
Reactome: a database of reactions, pathways and biological processes. Nucleic Acids Res (2010) 11.23
Open source system for analyzing, validating, and storing protein identification data. J Proteome Res (2004) 8.11
PRIDE: the proteomics identifications database. Proteomics (2005) 7.52
The IntAct molecular interaction database in 2012. Nucleic Acids Res (2011) 7.49
Interpretation of shotgun proteomic data: the protein inference problem. Mol Cell Proteomics (2005) 6.28
PeptideAtlas: a resource for target selection for emerging targeted proteomics workflows. EMBO Rep (2008) 6.10
A guide to the Proteomics Identifications Database proteomics data repository. Proteomics (2009) 5.63
Selected reaction monitoring-based proteomics: workflows, potential, pitfalls and future directions. Nat Methods (2012) 4.93
mzML--a community standard for mass spectrometry data. Mol Cell Proteomics (2010) 4.81
PRIDE: new developments and new datasets. Nucleic Acids Res (2007) 4.42
PRIDE: a public repository of protein and peptide identifications for the proteomics community. Nucleic Acids Res (2006) 4.19
The Proteomics Identifications Database (PRIDE) and the ProteomExchange Consortium: making proteomics data accessible. Expert Rev Proteomics (2006) 3.74
PRIDE Converter: making proteomics data-sharing easy. Nat Biotechnol (2009) 3.22
PASSEL: the PeptideAtlas SRMexperiment library. Proteomics (2012) 3.14
PaxDb, a database of protein abundance averages across all three domains of life. Mol Cell Proteomics (2012) 2.93
BioMart: a data federation framework for large collaborative projects. Database (Oxford) (2011) 2.90
The mzIdentML data standard for mass spectrometry-based proteomics results. Mol Cell Proteomics (2012) 2.82
Proteomics: a pragmatic perspective. Nat Biotechnol (2010) 2.81
Methionine oxidation and aging. Biochim Biophys Acta (2005) 2.37
Recent de novo origin of human protein-coding genes. Genome Res (2009) 2.36
A home for raw proteomics data. Nat Methods (2012) 2.28
The Ontology Lookup Service: bigger and better. Nucleic Acids Res (2010) 2.27
The PRoteomics IDEntification (PRIDE) Converter 2 framework: an improved suite of tools to facilitate data submission to the PRIDE database and the ProteomeXchange consortium. Mol Cell Proteomics (2012) 2.10
PRIDE Inspector: a tool to visualize and validate MS proteomics data. Nat Biotechnol (2012) 2.10
jmzML, an open-source Java API for mzML, the PSI standard for MS data. Proteomics (2010) 1.96
Analysis of high accuracy, quantitative proteomics data in the MaxQB database. Mol Cell Proteomics (2012) 1.81
MOPED: Model Organism Protein Expression Database. Nucleic Acids Res (2011) 1.79
neXtProt: a knowledge platform for human proteins. Nucleic Acids Res (2011) 1.77
The proteios software environment: an extensible multiuser platform for management and analysis of proteomics data. J Proteome Res (2009) 1.76
Recent developments in public proteomic MS repositories and pipelines. Proteomics (2009) 1.72
Dasty3, a WEB framework for DAS. Bioinformatics (2011) 1.67
PRIDE: quality control in a proteomics data repository. Database (Oxford) (2012) 1.63
NCBI Peptidome: a new public repository for mass spectrometry peptide identifications. Nat Biotechnol (2009) 1.59
Top-down mass spectrometry: recent developments, applications and perspectives. Analyst (2011) 1.50
jmzReader: A Java parser library to process and visualize multiple text and XML-based mass spectrometry data formats. Proteomics (2012) 1.49
jmzIdentML API: A Java interface to the mzIdentML standard for peptide and protein identification data. Proteomics (2012) 1.44
Analyzing large-scale proteomics projects with latent semantic indexing. J Proteome Res (2007) 1.39
Proteomics data repositories: providing a safe haven for your data and acting as a springboard for further research. J Proteomics (2010) 1.35
Critical amino acid residues in proteins: a BioMart integration of Reactome protein annotations with PRIDE mass spectrometry data and COSMIC somatic mutations. Database (Oxford) (2011) 1.32
Consequences of the discontinuation of the International Protein Index (IPI) database and its substitution by the UniProtKB "complete proteome" sets. Proteomics (2011) 1.31
Database on Demand - an online tool for the custom generation of FASTA-formatted sequence databases. Proteomics (2009) 1.29
Improvements in the Protein Identifier Cross-Reference service. Nucleic Acids Res (2012) 1.29
Published and perished? The influence of the searched protein database on the long-term storage of proteomics data. Mol Cell Proteomics (2011) 1.26
Standard guidelines for the chromosome-centric human proteome project. J Proteome Res (2012) 1.20
Analysis of the experimental detection of central nervous system-related genes in human brain and cerebrospinal fluid datasets. Proteomics (2008) 1.14
Asymmetric and non-uniform evolution of recently duplicated human genes. Biol Direct (2010) 1.07
A posteriori quality control for the curation and reuse of public proteomics data. Proteomics (2011) 1.07
Towards a human proteomics atlas. Anal Bioanal Chem (2012) 0.99
The minimum information about a genome sequence (MIGS) specification. Nat Biotechnol (2008) 31.04
Reactome knowledgebase of human biological pathways and processes. Nucleic Acids Res (2008) 15.69
Promoting coherent minimum reporting guidelines for biological and biomedical investigations: the MIBBI project. Nat Biotechnol (2008) 12.96
Statistics in medicine--reporting of subgroup analyses in clinical trials. N Engl J Med (2007) 12.55
A common open representation of mass spectrometry data and its application to proteomics research. Nat Biotechnol (2004) 11.42
Reactome: a database of reactions, pathways and biological processes. Nucleic Acids Res (2010) 11.23
The minimum information about a proteomics experiment (MIAPE). Nat Biotechnol (2007) 10.24
The Ontology Lookup Service, a lightweight cross-platform tool for controlled vocabulary queries. BMC Bioinformatics (2006) 8.68
The Reactome pathway knowledgebase. Nucleic Acids Res (2013) 8.56
The minimum information required for reporting a molecular interaction experiment (MIMIx). Nat Biotechnol (2007) 8.24
Broadening the horizon--level 2.5 of the HUPO-PSI format for molecular interactions. BMC Biol (2007) 8.03
H2S as a physiologic vasorelaxant: hypertension in mice with deletion of cystathionine gamma-lyase. Science (2008) 7.89
PRIDE: the proteomics identifications database. Proteomics (2005) 7.52
The IntAct molecular interaction database in 2012. Nucleic Acids Res (2011) 7.49
Calling on a million minds for community annotation in WikiProteins. Genome Biol (2008) 7.11
Integrating biological data--the Distributed Annotation System. BMC Bioinformatics (2008) 6.56
A guide to the Proteomics Identifications Database proteomics data repository. Proteomics (2009) 5.63
Specific and nonhepatotoxic degradation of nuclear hepatitis B virus cccDNA. Science (2014) 5.47
PSICQUIC and PSISCORE: accessing and scoring molecular interactions. Nat Methods (2011) 5.01
mzML--a community standard for mass spectrometry data. Mol Cell Proteomics (2010) 4.81
The Ontology Lookup Service: more data and better tools for controlled vocabulary queries. Nucleic Acids Res (2008) 4.73
Toward interoperable bioscience data. Nat Genet (2012) 4.72
H2S signals through protein S-sulfhydration. Sci Signal (2009) 4.54
The Proteomics Identifications database: 2010 update. Nucleic Acids Res (2009) 4.47
PRIDE: new developments and new datasets. Nucleic Acids Res (2007) 4.42
The MIntAct project--IntAct as a common curation platform for 11 molecular interaction databases. Nucleic Acids Res (2013) 4.39
PRIDE: a public repository of protein and peptide identifications for the proteomics community. Nucleic Acids Res (2006) 4.19
The Protein Identifier Cross-Referencing (PICR) service: reconciling protein identifiers across multiple source databases. BMC Bioinformatics (2007) 3.97
Activating ESR1 mutations in hormone-resistant metastatic breast cancer. Nat Genet (2013) 3.96
Extended high viremics: a substantial fraction of individuals maintain high plasma viral RNA levels after acute HIV-1 subtype C infection. AIDS (2011) 3.95
The implications of alternative splicing in the ENCODE protein complement. Proc Natl Acad Sci U S A (2007) 3.93
The proteomics standards initiative. Proteomics (2003) 3.78
Recommendations from the 2008 International Summit on Proteomics Data Release and Sharing Policy: the Amsterdam principles. J Proteome Res (2009) 3.77
The Proteomics Identifications Database (PRIDE) and the ProteomExchange Consortium: making proteomics data accessible. Expert Rev Proteomics (2006) 3.74
Five years of progress in the Standardization of Proteomics Data 4th Annual Spring Workshop of the HUPO-Proteomics Standards Initiative April 23-25, 2007 Ecole Nationale Supérieure (ENS), Lyon, France. Proteomics (2007) 3.69
The Functional Genomics Experiment model (FuGE): an extensible framework for standards in functional genomics. Nat Biotechnol (2007) 3.55
Paraneoplastic thrombocytosis in ovarian cancer. N Engl J Med (2012) 3.54
Latent TGF-β structure and activation. Nature (2011) 3.42
Dasty2, an Ajax protein DAS client. Bioinformatics (2008) 3.26
Protein interaction data curation: the International Molecular Exchange (IMEx) consortium. Nat Methods (2012) 3.17
Identification of targetable FGFR gene fusions in diverse cancers. Cancer Discov (2013) 3.13
Flexible use of nuclear import pathways by HIV-1. Cell Host Microbe (2010) 3.08
Hydrogen sulfide as endothelium-derived hyperpolarizing factor sulfhydrates potassium channels. Circ Res (2011) 2.94
H(2)S-induced vasorelaxation and underlying cellular and molecular mechanisms. Am J Physiol Heart Circ Physiol (2002) 2.90
Clinical proteomics: A need to define the field and to begin to set adequate standards. Proteomics Clin Appl (2007) 2.84
The mzIdentML data standard for mass spectrometry-based proteomics results. Mol Cell Proteomics (2012) 2.82
Submit your interaction data the IMEx way: a step by step guide to trouble-free deposition. Proteomics (2007) 2.74
Dasty and UniProt DAS: a perfect pair for protein feature visualization. Bioinformatics (2005) 2.74
Carbon monoxide: endogenous production, physiological functions, and pharmacological applications. Pharmacol Rev (2005) 2.73
InterPro: an integrated documentation resource for protein families, domains and functional sites. Brief Bioinform (2002) 2.66
Hydrogen sulfide is an endogenous stimulator of angiogenesis. Proc Natl Acad Sci U S A (2009) 2.66
Hydrogen sulfide-induced relaxation of resistance mesenteric artery beds of rats. Am J Physiol Heart Circ Physiol (2004) 2.62
Complete transfer of perceptual learning across retinal locations enabled by double training. Curr Biol (2008) 2.62
Mitochondrial outer-membrane protein FUNDC1 mediates hypoxia-induced mitophagy in mammalian cells. Nat Cell Biol (2012) 2.56
BioJS: an open source JavaScript framework for biological data visualization. Bioinformatics (2013) 2.53
GARP (LRRC32) is essential for the surface expression of latent TGF-beta on platelets and activated FOXP3+ regulatory T cells. Proc Natl Acad Sci U S A (2009) 2.51
Colistin resistance of Acinetobacter baumannii: clinical reports, mechanisms and antimicrobial strategies. J Antimicrob Chemother (2012) 2.49
Sirtuin 3, a new target of PGC-1alpha, plays an important role in the suppression of ROS and mitochondrial biogenesis. PLoS One (2010) 2.44
The work of the Human Proteome Organisation's Proteomics Standards Initiative (HUPO PSI). OMICS (2006) 2.38
SLAF-seq: an efficient method of large-scale de novo SNP discovery and genotyping using high-throughput sequencing. PLoS One (2013) 2.36
Annotating cancer variants and anti-cancer therapeutics in reactome. Cancers (Basel) (2012) 2.35
Dysregulation of hydrogen sulfide producing enzyme cystathionine γ-lyase contributes to maternal hypertension and placental abnormalities in preeclampsia. Circulation (2013) 2.34
The Protein Feature Ontology: a tool for the unification of protein feature annotations. Bioinformatics (2008) 2.33
FoxP3+CD4+ regulatory T cells play an important role in acute HIV-1 infection in humanized Rag2-/-gammaC-/- mice in vivo. Blood (2008) 2.31
Identification of recurrent NAB2-STAT6 gene fusions in solitary fibrous tumor by integrative sequencing. Nat Genet (2013) 2.30
The use of common ontologies and controlled vocabularies to enable data exchange and deposition for complex proteomic experiments. Pac Symp Biocomput (2005) 2.29
The Ontology Lookup Service: bigger and better. Nucleic Acids Res (2010) 2.27
Cell type-specific binding patterns reveal that TCF7L2 can be tethered to the genome by association with GATA3. Genome Biol (2012) 2.19
Genetic loci affecting resistance to human malaria parasites in a West African mosquito vector population. Science (2002) 2.11
The PRoteomics IDEntification (PRIDE) Converter 2 framework: an improved suite of tools to facilitate data submission to the PRIDE database and the ProteomeXchange consortium. Mol Cell Proteomics (2012) 2.10
PRIDE Inspector: a tool to visualize and validate MS proteomics data. Nat Biotechnol (2012) 2.10