Published in Nucleic Acids Res on November 11, 2009
ISA software suite: supporting standards-compliant experimental annotation and enabling curation at the community level. Bioinformatics (2010) 5.60
2016 update of the PRIDE database and its related tools. Nucleic Acids Res (2015) 5.14
Toward interoperable bioscience data. Nat Genet (2012) 4.72
PATRIC: the comprehensive bacterial bioinformatics resource with a focus on human pathogenic species. Infect Immun (2011) 4.57
The BioSample Database (BioSD) at the European Bioinformatics Institute. Nucleic Acids Res (2011) 3.05
BioMart Central Portal: an open database network for the biological community. Database (Oxford) (2011) 3.03
PaxDb, a database of protein abundance averages across all three domains of life. Mol Cell Proteomics (2012) 2.93
BioMart: a data federation framework for large collaborative projects. Database (Oxford) (2011) 2.90
The Sol Genomics Network (solgenomics.net): growing tomatoes using Perl. Nucleic Acids Res (2010) 2.74
The European Bioinformatics Institute's data resources. Nucleic Acids Res (2009) 2.55
The Ontology Lookup Service: bigger and better. Nucleic Acids Res (2010) 2.27
The 2012 Nucleic Acids Research Database Issue and the online Molecular Biology Database Collection. Nucleic Acids Res (2011) 2.16
The PRoteomics IDEntification (PRIDE) Converter 2 framework: an improved suite of tools to facilitate data submission to the PRIDE database and the ProteomeXchange consortium. Mol Cell Proteomics (2012) 2.10
PRIDE Inspector: a tool to visualize and validate MS proteomics data. Nat Biotechnol (2012) 2.10
MitoMiner: a data warehouse for mitochondrial proteomics data. Nucleic Acids Res (2011) 1.79
Human Protein Reference Database and Human Proteinpedia as resources for phosphoproteome analysis. Mol Biosyst (2011) 1.62
S-bacillithiolation protects against hypochlorite stress in Bacillus subtilis as revealed by transcriptomics and redox proteomics. Mol Cell Proteomics (2011) 1.48
Molecular architecture of the chick vestibular hair bundle. Nat Neurosci (2013) 1.43
Systems-based analysis of Arabidopsis leaf growth reveals adaptation to water deficit. Mol Syst Biol (2012) 1.38
Proteomics data repositories: providing a safe haven for your data and acting as a springboard for further research. J Proteomics (2010) 1.35
Hominoid-specific de novo protein-coding genes originating from long non-coding RNAs. PLoS Genet (2012) 1.35
PRIDE Cluster: building a consensus of proteomics data. Nat Methods (2013) 1.34
Deep proteome coverage based on ribosome profiling aids mass spectrometry-based protein and peptide discovery and provides evidence of alternative translation products and near-cognate translation initiation events. Mol Cell Proteomics (2013) 1.33
Critical amino acid residues in proteins: a BioMart integration of Reactome protein annotations with PRIDE mass spectrometry data and COSMIC somatic mutations. Database (Oxford) (2011) 1.32
Consequences of the discontinuation of the International Protein Index (IPI) database and its substitution by the UniProtKB "complete proteome" sets. Proteomics (2011) 1.31
The HUPO proteomics standards initiative- mass spectrometry controlled vocabulary. Database (Oxford) (2013) 1.31
Expanding the known repertoire of virulence factors produced by Bacillus cereus through early secretome profiling in three redox conditions. Mol Cell Proteomics (2010) 1.31
Improvements in the Protein Identifier Cross-Reference service. Nucleic Acids Res (2012) 1.29
The mzQuantML data standard for mass spectrometry-based quantitative studies in proteomics. Mol Cell Proteomics (2013) 1.28
Isolation and proteomic characterization of the Arabidopsis Golgi defines functional and novel components involved in plant cell wall biosynthesis. Plant Physiol (2012) 1.26
Published and perished? The influence of the searched protein database on the long-term storage of proteomics data. Mol Cell Proteomics (2011) 1.26
Comparative phosphoproteome profiling reveals a function of the STN8 kinase in fine-tuning of cyclic electron flow (CEF). Proc Natl Acad Sci U S A (2011) 1.20
Putative glycosyltransferases and other plant Golgi apparatus proteins are revealed by LOPIT proteomics. Plant Physiol (2012) 1.20
Comparative proteogenomics of twelve Roseobacter exoproteomes reveals different adaptive strategies among these marine bacteria. Mol Cell Proteomics (2011) 1.11
Intermembrane space proteome of yeast mitochondria. Mol Cell Proteomics (2012) 1.09
The MetaboLights repository: curation challenges in metabolomics. Database (Oxford) (2013) 1.08
Restricting fermentative potential by proteome remodeling: an adaptive strategy evidenced in Bacillus cereus. Mol Cell Proteomics (2012) 1.08
Jasmonate controls polypeptide patterning in undamaged tissue in wounded Arabidopsis leaves. Plant Physiol (2011) 1.06
De novo ORFs in Drosophila are important to organismal fitness and evolved rapidly from previously non-coding sequences. PLoS Genet (2013) 1.06
Honey bee protein atlas at organ-level resolution. Genome Res (2013) 1.03
Revisiting iodination sites in thyroglobulin with an organ-oriented shotgun strategy. J Biol Chem (2010) 1.00
Open source libraries and frameworks for mass spectrometry based proteomics: a developer's perspective. Biochim Biophys Acta (2013) 1.00
Proteomic analysis indicates massive changes in metabolism prior to the inhibition of growth and photosynthesis of grapevine (Vitis vinifera L.) in response to water deficit. BMC Plant Biol (2013) 1.00
Proteomic analysis of extracellular matrix from the hepatic stellate cell line LX-2 identifies CYR61 and Wnt-5a as novel constituents of fibrotic liver. J Proteome Res (2012) 1.00
The synaptic proteome during development and plasticity of the mouse visual cortex. Mol Cell Proteomics (2011) 0.99
Skeletal muscle proteomics: carbohydrate metabolism oscillates with seasonal and torpor-arousal physiology of hibernation. Am J Physiol Regul Integr Comp Physiol (2011) 0.99
Upregulation of the phthiocerol dimycocerosate biosynthetic pathway by rifampin-resistant, rpoB mutant Mycobacterium tuberculosis. J Bacteriol (2012) 0.98
Proteomic analysis of α4β1 integrin adhesion complexes reveals α-subunit-dependent protein recruitment. Proteomics (2012) 0.98
Functional transcriptomics in the post-ENCODE era. Genome Res (2013) 0.98
Rac1 is deactivated at integrin activation sites through an IQGAP1-filamin-A-RacGAP1 pathway. J Cell Sci (2013) 0.97
Five friends of methylated chromatin target of protein-arginine-methyltransferase[prmt]-1 (chtop), a complex linking arginine methylation to desumoylation. Mol Cell Proteomics (2012) 0.97
The MHC I immunopeptidome conveys to the cell surface an integrative view of cellular regulation. Mol Syst Biol (2011) 0.96
Metabolic switches and adaptations deduced from the proteomes of Streptomyces coelicolor wild type and phoP mutant grown in batch culture. Mol Cell Proteomics (2011) 0.96
Proteomic profiling of cereal aphid saliva reveals both ubiquitous and adaptive secreted proteins. PLoS One (2013) 0.95
Molecular and proteomic analyses highlight the importance of ubiquitination for the stress resistance, metabolic adaptation, morphogenetic regulation and virulence of Candida albicans. Mol Microbiol (2011) 0.95
Comparative proteomic analysis of supportive and unsupportive extracellular matrix substrates for human embryonic stem cell maintenance. J Biol Chem (2013) 0.95
Recommendations for mass spectrometry data quality metrics for open access data (corollary to the Amsterdam Principles). Mol Cell Proteomics (2011) 0.94
Identification of sumoylation targets, combined with inactivation of SMT3, reveals the impact of sumoylation upon growth, morphology, and stress resistance in the pathogen Candida albicans. Mol Biol Cell (2011) 0.94
An inventory of the Aspergillus niger secretome by combining in silico predictions with shotgun proteomics data. BMC Genomics (2010) 0.94
Proteogenomic analysis of Bradyrhizobium japonicum USDA110 using GenoSuite, an automated multi-algorithmic pipeline. Mol Cell Proteomics (2013) 0.94
Proteomic analysis of the secretory response of Aspergillus niger to D-maltose and D-xylose. PLoS One (2011) 0.92
Degradomics reveals that cleavage specificity profiles of caspase-2 and effector caspases are alike. J Biol Chem (2012) 0.92
Role of the Tau N-terminal region in microtubule stabilization revealed by new endogenous truncated forms. Sci Rep (2015) 0.91
Recommendations for mass spectrometry data quality metrics for open access data (corollary to the Amsterdam Principles). J Proteome Res (2011) 0.91
The conserved set of host proteins incorporated into HIV-1 virions suggests a common egress pathway in multiple cell types. J Proteome Res (2013) 0.91
Phosphoproteomic Analyses Reveal Early Signaling Events in the Osmotic Stress Response. Plant Physiol (2014) 0.90
Integrating the multiple dimensions of genomic and epigenomic landscapes of cancer. Cancer Metastasis Rev (2010) 0.90
Peptidome analysis of cerebrospinal fluid by LC-MALDI MS. PLoS One (2012) 0.90
The effect of proteasome inhibition on the generation of the human leukocyte antigen (HLA) peptidome. Mol Cell Proteomics (2013) 0.89
Deciphering the proteome of the in vivo diagnostic reagent "purified protein derivative" from Mycobacterium tuberculosis. Proteomics (2012) 0.88
Honey Bee Infecting Lake Sinai Viruses. Viruses (2015) 0.88
pep2pro: the high-throughput proteomics data processing, analysis, and visualization tool. Front Plant Sci (2012) 0.88
Large-scale evidence for conservation of NMD candidature across mammals. PLoS One (2010) 0.87
Proteomics: from single molecules to biological pathways. Cardiovasc Res (2012) 0.86
Ultrasonic incisions produce less inflammatory mediator response during early healing than electrosurgical incisions. PLoS One (2013) 0.86
Responses of the Emiliania huxleyi proteome to ocean acidification. PLoS One (2013) 0.85
Glycosyltransferases from oat (Avena) implicated in the acylation of avenacins. J Biol Chem (2012) 0.85
A standardized framing for reporting protein identifications in mzIdentML 1.2. Proteomics (2014) 0.85
Transcriptome and proteome data reveal candidate genes for pollinator attraction in sexually deceptive orchids. PLoS One (2013) 0.84
Proteomic analysis of purified protein derivative of Mycobacterium tuberculosis. Clin Proteomics (2013) 0.84
Aureolib - a proteome signature library: towards an understanding of staphylococcus aureus pathophysiology. PLoS One (2013) 0.83
Candidate hippocampal biomarkers of susceptibility and resilience to stress in a rat model of depression. Mol Cell Proteomics (2012) 0.83
Integrated transcriptomic and proteomic analysis of the physiological response of Escherichia coli O157:H7 Sakai to steady-state conditions of cold and water activity stress. Mol Cell Proteomics (2011) 0.83
Controlled vocabularies and ontologies in proteomics: overview, principles and practice. Biochim Biophys Acta (2013) 0.83
A fast and reproducible method for albumin isolation and depletion from serum and cerebrospinal fluid. Proteomics (2013) 0.83
Integrated omics study delineates the dynamics of lipid droplets in Rhodococcus opacus PD630. Nucleic Acids Res (2013) 0.83
dbDEPC 2.0: updated database of differentially expressed proteins in human cancers. Nucleic Acids Res (2011) 0.82
IQGAP1 is a key node within the small GTPase network. Small GTPases (2013) 0.82
Integrated genomics and proteomics of the Torpedo californica electric organ: concordance with the mammalian neuromuscular junction. Skelet Muscle (2011) 0.82
Mass spectrometric identification of in vivo phosphorylation sites of differentially expressed proteins in elongating cotton fiber cells. PLoS One (2013) 0.81
Plasma proteomics shows an elevation of the anti-inflammatory protein APOA-IV in chronic equine laminitis. BMC Vet Res (2012) 0.81
Confident and sensitive phosphoproteomics using combinations of collision induced dissociation and electron transfer dissociation. J Proteomics (2014) 0.80
Pride-asap: automatic fragment ion annotation of identified PRIDE spectra. J Proteomics (2013) 0.80
Bioinformatics for spermatogenesis: annotation of male reproduction based on proteomics. Asian J Androl (2013) 0.79
Proteomics and the analysis of proteomic data: 2013 overview of current protein-profiling technologies. Curr Protoc Bioinformatics (2013) 0.79
Genomic and proteomic characterization of SuMu, a Mu-like bacteriophage infecting Haemophilus parasuis. BMC Genomics (2012) 0.78
Impact of clostridial glucosylating toxins on the proteome of colonic cells determined by isotope-coded protein labeling and LC-MALDI. Proteome Sci (2011) 0.78
Determination of phosphorylation sites in the DivIVA cytoskeletal protein of Streptomyces coelicolor by targeted LC-MS/MS. J Proteome Res (2013) 0.76
GAPP: A Proteogenomic Software for Genome Annotation and Global Profiling of Post-translational Modifications in Prokaryotes. Mol Cell Proteomics (2016) 0.75
"Prostate cancer proteomics" database. Acta Naturae (2010) 0.75
Ensembl 2009. Nucleic Acids Res (2008) 25.38
InterPro: the integrative protein signature database. Nucleic Acids Res (2008) 25.07
Reactome knowledgebase of human biological pathways and processes. Nucleic Acids Res (2008) 15.69
The Universal Protein Resource (UniProt) 2009. Nucleic Acids Res (2008) 14.82
The International Protein Index: an integrated database for proteomics experiments. Proteomics (2004) 14.67
BioMart--biological queries made easy. BMC Genomics (2009) 11.06
Open source system for analyzing, validating, and storing protein identification data. J Proteome Res (2004) 8.11
PRIDE: the proteomics identifications database. Proteomics (2005) 7.52
PeptideAtlas: a resource for target selection for emerging targeted proteomics workflows. EMBO Rep (2008) 6.10
Credit where credit is overdue. Nat Biotechnol (2009) 5.97
A guide to the Proteomics Identifications Database proteomics data repository. Proteomics (2009) 5.63
The proteome of Saccharomyces cerevisiae mitochondria. Proc Natl Acad Sci U S A (2003) 5.13
The Ontology Lookup Service: more data and better tools for controlled vocabulary queries. Nucleic Acids Res (2008) 4.73
PRIDE: new developments and new datasets. Nucleic Acids Res (2007) 4.42
Protein sequences from mastodon and Tyrannosaurus rex revealed by mass spectrometry. Science (2007) 4.41
Genome-scale proteomics reveals Arabidopsis thaliana gene models and proteome dynamics. Science (2008) 4.38
PRIDE: a public repository of protein and peptide identifications for the proteomics community. Nucleic Acids Res (2006) 4.19
The Protein Identifier Cross-Referencing (PICR) service: reconciling protein identifiers across multiple source databases. BMC Bioinformatics (2007) 3.97
The Rat Genome Database 2009: variation, ontologies and pathways. Nucleic Acids Res (2008) 3.92
The Proteomics Identifications Database (PRIDE) and the ProteomExchange Consortium: making proteomics data accessible. Expert Rev Proteomics (2006) 3.74
Quantitative proteomics analysis of the secretory pathway. Cell (2006) 3.63
Reporting protein identification data: the next generation of guidelines. Mol Cell Proteomics (2006) 3.50
PRIDE Converter: making proteomics data-sharing easy. Nat Biotechnol (2009) 3.22
Comparative functional analysis of the Caenorhabditis elegans and Drosophila melanogaster proteomes. PLoS Biol (2009) 3.09
E-MSD: improving data deposition and structure quality. Nucleic Acids Res (2006) 2.41
Human plasma N-glycoproteome analysis by immunoaffinity subtraction, hydrazide chemistry, and mass spectrometry. J Proteome Res (2005) 2.35
Human Proteinpedia: a unified discovery resource for proteomics research. Nucleic Acids Res (2008) 2.30
High dynamic range characterization of the trauma patient plasma proteome. Mol Cell Proteomics (2006) 2.25
Democratizing proteomics data. Nat Biotechnol (2007) 2.14
Use of shotgun proteomics for the identification, confirmation, and correction of C. elegans gene annotations. Genome Res (2008) 1.90
Bioinformatics: bringing it all together. Nature (2002) 1.80
Recent developments in public proteomic MS repositories and pipelines. Proteomics (2009) 1.72
NCBI Peptidome: a new public repository for mass spectrometry peptide identifications. Nat Biotechnol (2009) 1.59
Analyzing large-scale proteomics projects with latent semantic indexing. J Proteome Res (2007) 1.39
ms_lims, a simple yet powerful open source laboratory information management system for MS-driven proteomics. Proteomics (2010) 1.36
Public proteomic MS repositories and pipelines: available tools and biological applications. Proteomics (2007) 1.32
Database on Demand - an online tool for the custom generation of FASTA-formatted sequence databases. Proteomics (2009) 1.29
7(th) HUPO World Congress of Proteomics: launching the second phase of the HUPOPlasma Proteome Project (PPP-2) 16-20 August 2008, Amsterdam, The Netherlands. Proteomics (2009) 1.22
The PRIDE proteomics identifications database: data submission, query, and dataset comparison. Methods Mol Biol (2008) 1.10
A la carte proteomics with an emphasis on gel-free techniques. Proteomics (2007) 1.00
A comparison of the HUPO Brain Proteome Project pilot with other proteomics studies. Proteomics (2006) 0.94
Annotating the human proteome: beyond establishing a parts list. Biochim Biophys Acta (2006) 0.93
The minimum information about a genome sequence (MIGS) specification. Nat Biotechnol (2008) 31.04
Reactome knowledgebase of human biological pathways and processes. Nucleic Acids Res (2008) 15.69
The PRoteomics IDEntifications (PRIDE) database and associated tools: status in 2013. Nucleic Acids Res (2012) 13.14
Promoting coherent minimum reporting guidelines for biological and biomedical investigations: the MIBBI project. Nat Biotechnol (2008) 12.96
A common open representation of mass spectrometry data and its application to proteomics research. Nat Biotechnol (2004) 11.42
Reactome: a database of reactions, pathways and biological processes. Nucleic Acids Res (2010) 11.23
The minimum information about a proteomics experiment (MIAPE). Nat Biotechnol (2007) 10.24
The Ontology Lookup Service, a lightweight cross-platform tool for controlled vocabulary queries. BMC Bioinformatics (2006) 8.68
The Reactome pathway knowledgebase. Nucleic Acids Res (2013) 8.56
The minimum information required for reporting a molecular interaction experiment (MIMIx). Nat Biotechnol (2007) 8.24
Broadening the horizon--level 2.5 of the HUPO-PSI format for molecular interactions. BMC Biol (2007) 8.03
PRIDE: the proteomics identifications database. Proteomics (2005) 7.52
The IntAct molecular interaction database in 2012. Nucleic Acids Res (2011) 7.49
Calling on a million minds for community annotation in WikiProteins. Genome Biol (2008) 7.11
The mTOR-regulated phosphoproteome reveals a mechanism of mTORC1-mediated inhibition of growth factor signaling. Science (2011) 6.75
Integrating biological data--the Distributed Annotation System. BMC Bioinformatics (2008) 6.56
A guide to the Proteomics Identifications Database proteomics data repository. Proteomics (2009) 5.63
Specific and nonhepatotoxic degradation of nuclear hepatitis B virus cccDNA. Science (2014) 5.47
PSICQUIC and PSISCORE: accessing and scoring molecular interactions. Nat Methods (2011) 5.01
mzML--a community standard for mass spectrometry data. Mol Cell Proteomics (2010) 4.81
The Ontology Lookup Service: more data and better tools for controlled vocabulary queries. Nucleic Acids Res (2008) 4.73
Toward interoperable bioscience data. Nat Genet (2012) 4.72
PRIDE: new developments and new datasets. Nucleic Acids Res (2007) 4.42
The MIntAct project--IntAct as a common curation platform for 11 molecular interaction databases. Nucleic Acids Res (2013) 4.39
Human Proteinpedia enables sharing of human protein data. Nat Biotechnol (2008) 4.21
PRIDE: a public repository of protein and peptide identifications for the proteomics community. Nucleic Acids Res (2006) 4.19
The Protein Identifier Cross-Referencing (PICR) service: reconciling protein identifiers across multiple source databases. BMC Bioinformatics (2007) 3.97
The implications of alternative splicing in the ENCODE protein complement. Proc Natl Acad Sci U S A (2007) 3.93
The proteomics standards initiative. Proteomics (2003) 3.78
Recommendations from the 2008 International Summit on Proteomics Data Release and Sharing Policy: the Amsterdam principles. J Proteome Res (2009) 3.77
The Proteomics Identifications Database (PRIDE) and the ProteomExchange Consortium: making proteomics data accessible. Expert Rev Proteomics (2006) 3.74
Five years of progress in the Standardization of Proteomics Data 4th Annual Spring Workshop of the HUPO-Proteomics Standards Initiative April 23-25, 2007 Ecole Nationale Supérieure (ENS), Lyon, France. Proteomics (2007) 3.69
Improved visualization of protein consensus sequences by iceLogo. Nat Methods (2009) 3.64
The Functional Genomics Experiment model (FuGE): an extensible framework for standards in functional genomics. Nat Biotechnol (2007) 3.55
Large-scale identification of N-terminal peptides in the halophilic archaea Halobacterium salinarum and Natronomonas pharaonis. J Proteome Res (2007) 3.30
Targeted quantitative analysis of Streptococcus pyogenes virulence factors by multiple reaction monitoring. Mol Cell Proteomics (2008) 3.29
Dasty2, an Ajax protein DAS client. Bioinformatics (2008) 3.26
PRIDE Converter: making proteomics data-sharing easy. Nat Biotechnol (2009) 3.22
Protein interaction data curation: the International Molecular Exchange (IMEx) consortium. Nat Methods (2012) 3.17
Exploring proteomes and analyzing protein processing by mass spectrometric identification of sorted N-terminal peptides. Nat Biotechnol (2003) 3.10
Clinical proteomics: A need to define the field and to begin to set adequate standards. Proteomics Clin Appl (2007) 2.84
The mzIdentML data standard for mass spectrometry-based proteomics results. Mol Cell Proteomics (2012) 2.82
Submit your interaction data the IMEx way: a step by step guide to trouble-free deposition. Proteomics (2007) 2.74
Dasty and UniProt DAS: a perfect pair for protein feature visualization. Bioinformatics (2005) 2.74
InterPro: an integrated documentation resource for protein families, domains and functional sites. Brief Bioinform (2002) 2.66
BioJS: an open source JavaScript framework for biological data visualization. Bioinformatics (2013) 2.53
The first comprehensive and quantitative analysis of human platelet protein composition allows the comparative analysis of structural and functional pathways. Blood (2012) 2.47
The bromodomain protein Brd4 insulates chromatin from DNA damage signalling. Nature (2013) 2.46
LNCipedia: a database for annotated human lncRNA transcript sequences and structures. Nucleic Acids Res (2012) 2.40
The work of the Human Proteome Organisation's Proteomics Standards Initiative (HUPO PSI). OMICS (2006) 2.38
Annotating cancer variants and anti-cancer therapeutics in reactome. Cancers (Basel) (2012) 2.35
Caspase-specific and nonspecific in vivo protein processing during Fas-induced apoptosis. Nat Methods (2005) 2.33
The Protein Feature Ontology: a tool for the unification of protein feature annotations. Bioinformatics (2008) 2.33
The use of common ontologies and controlled vocabularies to enable data exchange and deposition for complex proteomic experiments. Pac Symp Biocomput (2005) 2.29
The Ontology Lookup Service: bigger and better. Nucleic Acids Res (2010) 2.27
The PRoteomics IDEntification (PRIDE) Converter 2 framework: an improved suite of tools to facilitate data submission to the PRIDE database and the ProteomeXchange consortium. Mol Cell Proteomics (2012) 2.10
PRIDE Inspector: a tool to visualize and validate MS proteomics data. Nat Biotechnol (2012) 2.10
ProteomeBinders: planning a European resource of affinity reagents for analysis of the human proteome. Nat Methods (2007) 2.04
jmzML, an open-source Java API for mzML, the PSI standard for MS data. Proteomics (2010) 1.96
Experience using web services for biological sequence analysis. Brief Bioinform (2008) 1.78
MINT and IntAct contribute to the Second BioCreative challenge: serving the text-mining community with high quality molecular interaction data. Genome Biol (2008) 1.76
Integral quantification accuracy estimation for reporter ion-based quantitative proteomics (iQuARI). J Proteome Res (2012) 1.72
Common interchange standards for proteomics data: Public availability of tools and schema. Proteomics (2004) 1.68
Dasty3, a WEB framework for DAS. Bioinformatics (2011) 1.67
The Reactome BioMart. Database (Oxford) (2011) 1.66
TraML--a standard format for exchange of selected reaction monitoring transition lists. Mol Cell Proteomics (2011) 1.65
PRIDE: quality control in a proteomics data repository. Database (Oxford) (2012) 1.63
SearchGUI: An open-source graphical user interface for simultaneous OMSSA and X!Tandem searches. Proteomics (2011) 1.63
The PSI semantic validator: a framework to check MIAPE compliance of proteomics data. Proteomics (2009) 1.62