Published in Proc Natl Acad Sci U S A on December 31, 2012
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Inactivation of Individual SeqA Binding Sites of the E. coli Origin Reveals Robustness of Replication Initiation Synchrony. PLoS One (2016) 0.75
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Insufficient levels of the nrdAB-encoded ribonucleotide reductase underlie the severe growth defect of the Δhda E. coli strain. Mol Microbiol (2017) 0.75
Control of Initiation of DNA Replication in Bacillus subtilis and Escherichia coli. Genes (Basel) (2017) 0.75
Cooperative DnaA binding to the negatively supercoiled datA locus stimulates DnaA-ATP hydrolysis. J Biol Chem (2016) 0.75
The Escherichia coli Cryptic Prophage Protein YfdR Binds to DnaA and Initiation of Chromosomal Replication Is Inhibited by Overexpression of the Gene Cluster yfdQ-yfdR-yfdS-yfdT. Front Microbiol (2016) 0.75
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Hyperinitiation of DNA replication in Escherichia coli leads to replication fork collapse and inviability. Mol Microbiol (2004) 1.37
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Highly organized DnaA-oriC complexes recruit the single-stranded DNA for replication initiation. Nucleic Acids Res (2011) 1.10
The box VII motif of Escherichia coli DnaA protein is required for DnaA oligomerization at the E. coli replication origin. J Biol Chem (2004) 1.09
Deletion of the datA site does not affect once-per-cell-cycle timing but induces rifampin-resistant replication. J Bacteriol (2005) 1.09
Rifampicin-resistant initiation of chromosome replication from oriC in ihf mutants. Mol Microbiol (2000) 1.01
Coordinated replication and sequestration of oriC and dnaA are required for maintaining controlled once-per-cell-cycle initiation in Escherichia coli. J Bacteriol (2005) 1.00
Novel essential residues of Hda for interaction with DnaA in the regulatory inactivation of DnaA: unique roles for Hda AAA Box VI and VII motifs. Mol Microbiol (2010) 0.97
Initiator titration complex formed at datA with the aid of IHF regulates replication timing in Escherichia coli. Genes Cells (2009) 0.97
Sequence characteristics required for cooperative binding and efficient in vivo titration of the replication initiator protein DnaA in E. coli. J Mol Biol (2007) 0.95
Cluster of DnaA boxes involved in regulation of Streptomyces chromosome replication: from in silico to in vivo studies. J Bacteriol (2006) 0.92
Regulation of chromosomal replication initiation by oriC-proximal DnaA-box clusters in Bacillus subtilis. Nucleic Acids Res (2011) 0.90
Multiple pathways regulating DnaA function in Escherichia coli: distinct roles for DnaA titration by the datA locus and the regulatory inactivation of DnaA. Biochimie (2001) 0.89
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Structural basis of replication origin recognition by the DnaA protein. Nucleic Acids Res (2003) 1.54
Fate of DNA replication fork encountering a single DNA lesion during oriC plasmid DNA replication in vitro. Genes Cells (2003) 1.48
A common mechanism for the ATP-DnaA-dependent formation of open complexes at the replication origin. J Biol Chem (2008) 1.46
Formation of an ATP-DnaA-specific initiation complex requires DnaA Arginine 285, a conserved motif in the AAA+ protein family. J Biol Chem (2005) 1.39
The interaction of DiaA and DnaA regulates the replication cycle in E. coli by directly promoting ATP DnaA-specific initiation complexes. Genes Dev (2007) 1.37
Protein associations in DnaA-ATP hydrolysis mediated by the Hda-replicase clamp complex. J Biol Chem (2004) 1.34
A nucleotide switch in the Escherichia coli DnaA protein initiates chromosomal replication: evidnece from a mutant DnaA protein defective in regulatory ATP hydrolysis in vitro and in vivo. J Biol Chem (2002) 1.32
Regulating DNA replication in bacteria. Cold Spring Harb Perspect Biol (2013) 1.31
Structure and function of DnaA N-terminal domains: specific sites and mechanisms in inter-DnaA interaction and in DnaB helicase loading on oriC. J Biol Chem (2007) 1.31
DiaA, a novel DnaA-binding protein, ensures the timely initiation of Escherichia coli chromosome replication. J Biol Chem (2004) 1.27
Specific genomic sequences of E. coli promote replicational initiation by directly reactivating ADP-DnaA. Genes Dev (2009) 1.23
DnaA, ORC, and Cdc6: similarity beyond the domains of life and diversity. Biochem Cell Biol (2010) 1.21
DnaA structure, function, and dynamics in the initiation at the chromosomal origin. Plasmid (2009) 1.19
Modes of overinitiation, dnaA gene expression, and inhibition of cell division in a novel cold-sensitive hda mutant of Escherichia coli. J Bacteriol (2008) 1.14
DiaA dynamics are coupled with changes in initial origin complexes leading to helicase loading. J Biol Chem (2009) 1.12
Involvement of the Escherichia coli folate-binding protein YgfZ in RNA modification and regulation of chromosomal replication initiation. Mol Microbiol (2006) 1.11
Highly organized DnaA-oriC complexes recruit the single-stranded DNA for replication initiation. Nucleic Acids Res (2011) 1.10
Molecular mechanism of DNA replication-coupled inactivation of the initiator protein in Escherichia coli: interaction of DnaA with the sliding clamp-loaded DNA and the sliding clamp-Hda complex. Genes Cells (2004) 1.06
Crystal structure of a biologically functional form of PriB from Escherichia coli reveals a potential single-stranded DNA-binding site. Biochem Biophys Res Commun (2005) 1.02
The exceptionally tight affinity of DnaA for ATP/ADP requires a unique aspartic acid residue in the AAA+ sensor 1 motif. Mol Microbiol (2006) 0.98
Novel essential residues of Hda for interaction with DnaA in the regulatory inactivation of DnaA: unique roles for Hda AAA Box VI and VII motifs. Mol Microbiol (2010) 0.97
Hda monomerization by ADP binding promotes replicase clamp-mediated DnaA-ATP hydrolysis. J Biol Chem (2008) 0.97
Loss of Hda activity stimulates replication initiation from I-box, but not R4 mutant origins in Escherichia coli. Mol Microbiol (2008) 0.96
Replication-dependent recruitment of the beta-subunit of DNA polymerase III from cytosolic spaces to replication forks in Escherichia coli. J Bacteriol (2002) 0.95
The DnaA homolog of the hyperthermophilic eubacterium Thermotoga maritima forms an open complex with a minimal 149-bp origin region in an ATP-dependent manner. Genes Cells (2006) 0.92
Differentiation of the DnaA-oriC subcomplex for DNA unwinding in a replication initiation complex. J Biol Chem (2012) 0.90
An isolated Hda-clamp complex is functional in the regulatory inactivation of DnaA and DNA replication. J Struct Biol (2006) 0.86
A replicase clamp-binding dynamin-like protein promotes colocalization of nascent DNA strands and equipartitioning of chromosomes in E. coli. Cell Rep (2013) 0.84
Suppressors of DnaA(ATP) imposed overinitiation in Escherichia coli. Mol Microbiol (2010) 0.84
Transcriptional control for initiation of chromosomal replication in Escherichia coli: fluctuation of the level of origin transcription ensures timely initiation. Genes Cells (2003) 0.84
DnaA protein DNA-binding domain binds to Hda protein to promote inter-AAA+ domain interaction involved in regulatory inactivation of DnaA. J Biol Chem (2011) 0.83
Reactivation of DnaA by DNA sequence-specific nucleotide exchange in vitro. Biochem Biophys Res Commun (2004) 0.82
Determination of the secondary structure in solution of the Escherichia coli DnaA DNA-binding domain. Biochem Biophys Res Commun (2002) 0.82
Novel heat shock protein HspQ stimulates the degradation of mutant DnaA protein in Escherichia coli. Genes Cells (2004) 0.81
The DnaA N-terminal domain interacts with Hda to facilitate replicase clamp-mediated inactivation of DnaA. Environ Microbiol (2013) 0.80
Domain separation and characterization of PriC, a replication restart primosome factor in Escherichia coli. Genes Cells (2013) 0.80
Cooperative working of bacterial chromosome replication proteins generated by a reconstituted protein expression system. Nucleic Acids Res (2013) 0.79
Assignment of 1H, 13C and 15N resonances of N-terminal domain of DnaA protein. Biomol NMR Assign (2007) 0.77
Solution structure of the N-terminal domain of a replication restart primosome factor, PriC, in Escherichia coli. Protein Sci (2013) 0.77
DNA replication defects in a mutant deficient in the thioredoxin homolog YbbN. Biochem Biophys Res Commun (2010) 0.76
AAA+ proteins. Editorial. J Struct Biol (2012) 0.76
Stable nucleotide binding to DnaA requires a specific glutamic acid residue within the AAA+ box II motif. J Struct Biol (2012) 0.75
[Regulatory mechanisms for the initiation of chromosomal replication in E. coli]. Tanpakushitsu Kakusan Koso (2009) 0.75