Published in J Biol Chem on December 14, 2004
Two E3 ubiquitin ligases, SCF-Skp2 and DDB1-Cul4, target human Cdt1 for proteolysis. EMBO J (2006) 3.53
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A novel regulatory mechanism couples deoxyribonucleotide synthesis and DNA replication in Escherichia coli. EMBO J (2006) 1.65
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Functional dissection of YabA, a negative regulator of DNA replication initiation in Bacillus subtilis. Proc Natl Acad Sci U S A (2006) 1.27
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Specific genomic sequences of E. coli promote replicational initiation by directly reactivating ADP-DnaA. Genes Dev (2009) 1.23
Modes of overinitiation, dnaA gene expression, and inhibition of cell division in a novel cold-sensitive hda mutant of Escherichia coli. J Bacteriol (2008) 1.14
DiaA dynamics are coupled with changes in initial origin complexes leading to helicase loading. J Biol Chem (2009) 1.12
Hda-mediated inactivation of the DnaA protein and dnaA gene autoregulation act in concert to ensure homeostatic maintenance of the Escherichia coli chromosome. Genes Dev (2006) 1.10
Modularity of the bacterial cell cycle enables independent spatial and temporal control of DNA replication. Curr Biol (2011) 1.08
Hda monomerization by ADP binding promotes replicase clamp-mediated DnaA-ATP hydrolysis. J Biol Chem (2008) 0.97
Slow unloading leads to DNA-bound β2-sliding clamp accumulation in live Escherichia coli cells. Nat Commun (2014) 0.94
Regulation of the activity of the dual-function DnaA protein in Caulobacter crescentus. PLoS One (2011) 0.93
The sporulation protein SirA inhibits the binding of DnaA to the origin of replication by contacting a patch of clustered amino acids. J Bacteriol (2011) 0.93
The structure of a DnaA/HobA complex from Helicobacter pylori provides insight into regulation of DNA replication in bacteria. Proc Natl Acad Sci U S A (2009) 0.89
The β-sliding clamp directs the localization of HdaA to the replisome in Caulobacter crescentus. Microbiology (2013) 0.89
Mechanism for the TtDnaA-Tt-oriC cooperative interaction at high temperature and duplex opening at an unusual AT-rich region in Thermoanaerobacter tengcongensis. Nucleic Acids Res (2007) 0.88
A structural basis for the regulatory inactivation of DnaA. J Mol Biol (2008) 0.87
DnaAcos hyperinitiates by circumventing regulatory pathways that control the frequency of initiation in Escherichia coli. Mol Microbiol (2009) 0.84
DnaA protein DNA-binding domain binds to Hda protein to promote inter-AAA+ domain interaction involved in regulatory inactivation of DnaA. J Biol Chem (2011) 0.83
The primosomal protein DnaD inhibits cooperative DNA binding by the replication initiator DnaA in Bacillus subtilis. J Bacteriol (2012) 0.82
Reduced lipopolysaccharide phosphorylation in Escherichia coli lowers the elevated ori/ter ratio in seqA mutants. Mol Microbiol (2009) 0.82
Evidence for roles of the Escherichia coli Hda protein beyond regulatory inactivation of DnaA. Mol Microbiol (2012) 0.82
DNA Methylation. Ecosal Plus (2014) 0.82
Mutant DnaAs of Escherichia coli that are refractory to negative control. Nucleic Acids Res (2013) 0.80
Mutations at several loci cause increased expression of ribonucleotide reductase in Escherichia coli. J Bacteriol (2012) 0.79
Rapid exchange of bound ADP on the Staphylococcus aureus replication initiation protein DnaA. J Biol Chem (2009) 0.79
The rcbA gene product reduces spontaneous and induced chromosome breaks in Escherichia coli. J Bacteriol (2012) 0.77
Initiation of DNA Replication. Ecosal Plus (2010) 0.76
Dynamic assembly of Hda and the sliding clamp in the regulation of replication licensing. Nucleic Acids Res (2017) 0.75
Insufficient levels of the nrdAB-encoded ribonucleotide reductase underlie the severe growth defect of the Δhda E. coli strain. Mol Microbiol (2017) 0.75
Control of Initiation of DNA Replication in Bacillus subtilis and Escherichia coli. Genes (Basel) (2017) 0.75
Substitutions of Conserved Residues in the C-terminal Region of DnaC Cause Thermolability in Helicase Loading. J Biol Chem (2016) 0.75
The Role of the N-Terminal Domains of Bacterial Initiator DnaA in the Assembly and Regulation of the Bacterial Replication Initiation Complex. Genes (Basel) (2017) 0.75
Cell size and nucleoid organization of engineered Escherichia coli cells with a reduced genome. Mol Microbiol (2005) 2.77
Report from the Working Group of the Molecular Biology Society of Japan for the investigation of fraud in research papers. Genes Cells (2009) 2.02
Cryo-EM structure of a helicase loading intermediate containing ORC-Cdc6-Cdt1-MCM2-7 bound to DNA. Nat Struct Mol Biol (2013) 1.66
Structural basis of replication origin recognition by the DnaA protein. Nucleic Acids Res (2003) 1.54
Fate of DNA replication fork encountering a single DNA lesion during oriC plasmid DNA replication in vitro. Genes Cells (2003) 1.48
A common mechanism for the ATP-DnaA-dependent formation of open complexes at the replication origin. J Biol Chem (2008) 1.46
Formation of an ATP-DnaA-specific initiation complex requires DnaA Arginine 285, a conserved motif in the AAA+ protein family. J Biol Chem (2005) 1.39
The interaction of DiaA and DnaA regulates the replication cycle in E. coli by directly promoting ATP DnaA-specific initiation complexes. Genes Dev (2007) 1.37
A nucleotide switch in the Escherichia coli DnaA protein initiates chromosomal replication: evidnece from a mutant DnaA protein defective in regulatory ATP hydrolysis in vitro and in vivo. J Biol Chem (2002) 1.32
Regulating DNA replication in bacteria. Cold Spring Harb Perspect Biol (2013) 1.31
Structure and function of DnaA N-terminal domains: specific sites and mechanisms in inter-DnaA interaction and in DnaB helicase loading on oriC. J Biol Chem (2007) 1.31
DiaA, a novel DnaA-binding protein, ensures the timely initiation of Escherichia coli chromosome replication. J Biol Chem (2004) 1.27
Specific genomic sequences of E. coli promote replicational initiation by directly reactivating ADP-DnaA. Genes Dev (2009) 1.23
DnaA, ORC, and Cdc6: similarity beyond the domains of life and diversity. Biochem Cell Biol (2010) 1.21
DnaA structure, function, and dynamics in the initiation at the chromosomal origin. Plasmid (2009) 1.19
Modes of overinitiation, dnaA gene expression, and inhibition of cell division in a novel cold-sensitive hda mutant of Escherichia coli. J Bacteriol (2008) 1.14
DiaA dynamics are coupled with changes in initial origin complexes leading to helicase loading. J Biol Chem (2009) 1.12
Involvement of the Escherichia coli folate-binding protein YgfZ in RNA modification and regulation of chromosomal replication initiation. Mol Microbiol (2006) 1.11
Highly organized DnaA-oriC complexes recruit the single-stranded DNA for replication initiation. Nucleic Acids Res (2011) 1.10
Molecular mechanism of DNA replication-coupled inactivation of the initiator protein in Escherichia coli: interaction of DnaA with the sliding clamp-loaded DNA and the sliding clamp-Hda complex. Genes Cells (2004) 1.06
Cdc6-induced conformational changes in ORC bound to origin DNA revealed by cryo-electron microscopy. Structure (2012) 1.06
Crystal structure of a biologically functional form of PriB from Escherichia coli reveals a potential single-stranded DNA-binding site. Biochem Biophys Res Commun (2005) 1.02
The exceptionally tight affinity of DnaA for ATP/ADP requires a unique aspartic acid residue in the AAA+ sensor 1 motif. Mol Microbiol (2006) 0.98
DnaA binding locus datA promotes DnaA-ATP hydrolysis to enable cell cycle-coordinated replication initiation. Proc Natl Acad Sci U S A (2012) 0.98
Novel essential residues of Hda for interaction with DnaA in the regulatory inactivation of DnaA: unique roles for Hda AAA Box VI and VII motifs. Mol Microbiol (2010) 0.97
Hda monomerization by ADP binding promotes replicase clamp-mediated DnaA-ATP hydrolysis. J Biol Chem (2008) 0.97
Loss of Hda activity stimulates replication initiation from I-box, but not R4 mutant origins in Escherichia coli. Mol Microbiol (2008) 0.96
Replication-dependent recruitment of the beta-subunit of DNA polymerase III from cytosolic spaces to replication forks in Escherichia coli. J Bacteriol (2002) 0.95
The DnaA homolog of the hyperthermophilic eubacterium Thermotoga maritima forms an open complex with a minimal 149-bp origin region in an ATP-dependent manner. Genes Cells (2006) 0.92
Differentiation of the DnaA-oriC subcomplex for DNA unwinding in a replication initiation complex. J Biol Chem (2012) 0.90
An isolated Hda-clamp complex is functional in the regulatory inactivation of DnaA and DNA replication. J Struct Biol (2006) 0.86
Suppressors of DnaA(ATP) imposed overinitiation in Escherichia coli. Mol Microbiol (2010) 0.84
A replicase clamp-binding dynamin-like protein promotes colocalization of nascent DNA strands and equipartitioning of chromosomes in E. coli. Cell Rep (2013) 0.84
Transcriptional control for initiation of chromosomal replication in Escherichia coli: fluctuation of the level of origin transcription ensures timely initiation. Genes Cells (2003) 0.84
DnaA protein DNA-binding domain binds to Hda protein to promote inter-AAA+ domain interaction involved in regulatory inactivation of DnaA. J Biol Chem (2011) 0.83
Determination of the secondary structure in solution of the Escherichia coli DnaA DNA-binding domain. Biochem Biophys Res Commun (2002) 0.82
Reactivation of DnaA by DNA sequence-specific nucleotide exchange in vitro. Biochem Biophys Res Commun (2004) 0.82
Novel heat shock protein HspQ stimulates the degradation of mutant DnaA protein in Escherichia coli. Genes Cells (2004) 0.81
The DnaA N-terminal domain interacts with Hda to facilitate replicase clamp-mediated inactivation of DnaA. Environ Microbiol (2013) 0.80
Domain separation and characterization of PriC, a replication restart primosome factor in Escherichia coli. Genes Cells (2013) 0.80
Cooperative working of bacterial chromosome replication proteins generated by a reconstituted protein expression system. Nucleic Acids Res (2013) 0.79
Assignment of 1H, 13C and 15N resonances of N-terminal domain of DnaA protein. Biomol NMR Assign (2007) 0.77
Solution structure of the N-terminal domain of a replication restart primosome factor, PriC, in Escherichia coli. Protein Sci (2013) 0.77
DNA replication defects in a mutant deficient in the thioredoxin homolog YbbN. Biochem Biophys Res Commun (2010) 0.76
AAA+ proteins. Editorial. J Struct Biol (2012) 0.76
Stable nucleotide binding to DnaA requires a specific glutamic acid residue within the AAA+ box II motif. J Struct Biol (2012) 0.75
[Regulatory mechanisms for the initiation of chromosomal replication in E. coli]. Tanpakushitsu Kakusan Koso (2009) 0.75