Published in AMIA Annu Symp Proc on November 03, 2012
Secondary use of clinical data: the Vanderbilt approach. J Biomed Inform (2014) 1.12
Detection of sentence boundaries and abbreviations in clinical narratives. BMC Med Inform Decis Mak (2015) 0.85
The role of fine-grained annotations in supervised recognition of risk factors for heart disease from EHRs. J Biomed Inform (2015) 0.83
Classification of CT pulmonary angiography reports by presence, chronicity, and location of pulmonary embolism with natural language processing. J Biomed Inform (2014) 0.81
Interactive Cohort Identification of Sleep Disorder Patients Using Natural Language Processing and i2b2. Appl Clin Inform (2015) 0.78
Comparison of a semi-automatic annotation tool and a natural language processing application for the generation of clinical statement entries. J Am Med Inform Assoc (2014) 0.77
Identification and Progression of Heart Disease Risk Factors in Diabetic Patients from Longitudinal Electronic Health Records. Biomed Res Int (2015) 0.76
Natural Language Processing-Enabled and Conventional Data Capture Methods for Input to Electronic Health Records: A Comparative Usability Study. JMIR Med Inform (2016) 0.75
Developing a web-based SKOS editor. J Biomed Semantics (2016) 0.75
Towards Comprehensive Clinical Abbreviation Disambiguation Using Machine-Labeled Training Data. AMIA Annu Symp Proc (2017) 0.75
Semantic biomedical resource discovery: a Natural Language Processing framework. BMC Med Inform Decis Mak (2015) 0.75
Normalizing acronyms and abbreviations to aid patient understanding of clinical texts: ShARe/CLEF eHealth Challenge 2013, Task 2. J Biomed Semantics (2016) 0.75
A Preliminary Study of Clinical Abbreviation Disambiguation in Real Time. Appl Clin Inform (2015) 0.75
Effective mapping of biomedical text to the UMLS Metathesaurus: the MetaMap program. Proc AMIA Symp (2001) 40.22
A general natural-language text processor for clinical radiology. J Am Med Inform Assoc (1995) 29.81
Mayo clinical Text Analysis and Knowledge Extraction System (cTAKES): architecture, component evaluation and applications. J Am Med Inform Assoc (2010) 13.18
Development of a large-scale de-identified DNA biobank to enable personalized medicine. Clin Pharmacol Ther (2008) 11.67
An overview of MetaMap: historical perspective and recent advances. J Am Med Inform Assoc (2010) 11.60
Extracting principal diagnosis, co-morbidity and smoking status for asthma research: evaluation of a natural language processing system. BMC Med Inform Decis Mak (2006) 9.98
Extracting information from textual documents in the electronic health record: a review of recent research. Yearb Med Inform (2008) 8.09
Use of natural language processing to translate clinical information from a database of 889,921 chest radiographic reports. Radiology (2002) 5.52
Automated detection of adverse events using natural language processing of discharge summaries. J Am Med Inform Assoc (2005) 3.77
Natural language processing: an introduction. J Am Med Inform Assoc (2011) 3.50
Automated acquisition of disease drug knowledge from biomedical and clinical documents: an initial study. J Am Med Inform Assoc (2007) 3.09
Machine-learned solutions for three stages of clinical information extraction: the state of the art at i2b2 2010. J Am Med Inform Assoc (2011) 2.98
Natural language processing to extract medical problems from electronic clinical documents: performance evaluation. J Biomed Inform (2005) 2.80
A study of abbreviations in clinical notes. AMIA Annu Symp Proc (2007) 2.48
Extracting structured information from free text pathology reports. AMIA Annu Symp Proc (2003) 2.37
Ambiguous abbreviations: an audit of abbreviations in paediatric note keeping. Arch Dis Child (2007) 2.34
Concept-value pair extraction from semi-structured clinical narrative: a case study using echocardiogram reports. AMIA Annu Symp Proc (2005) 2.17
Machine learning and word sense disambiguation in the biomedical domain: design and evaluation issues. BMC Bioinformatics (2006) 1.93
Discovering peripheral arterial disease cases from radiology notes using natural language processing. AMIA Annu Symp Proc (2010) 1.86
Abbreviation and acronym disambiguation in clinical discourse. AMIA Annu Symp Proc (2005) 1.61
The KnowledgeMap project: development of a concept-based medical school curriculum database. AMIA Annu Symp Proc (2003) 1.59
Knowledge-based biomedical word sense disambiguation: comparison of approaches. BMC Bioinformatics (2010) 1.38
The Yale cTAKES extensions for document classification: architecture and application. J Am Med Inform Assoc (2011) 1.33
Extracting and integrating data from entire electronic health records for detecting colorectal cancer cases. AMIA Annu Symp Proc (2011) 1.29
Part-of-speech tagging for clinical text: wall or bridge between institutions? AMIA Annu Symp Proc (2011) 1.26
Automating tissue bank annotation from pathology reports - comparison to a gold standard expert annotation set. AMIA Annu Symp Proc (2005) 1.09
Automated evaluation of electronic discharge notes to assess quality of care for cardiovascular diseases using Medical Language Extraction and Encoding System (MedLEE). J Am Med Inform Assoc (2010) 1.07
An evaluation of the UMLS in representing corpus derived clinical concepts. AMIA Annu Symp Proc (2011) 1.06
Combining corpus-derived sense profiles with estimated frequency information to disambiguate clinical abbreviations. AMIA Annu Symp Proc (2012) 0.99
Detecting abbreviations in discharge summaries using machine learning methods. AMIA Annu Symp Proc (2011) 0.91
Use of abbreviations in daily progress notes. Arch Dis Child Fetal Neonatal Ed (2004) 0.91
The paediatric hospital medical record: a quality assessment. Aust Clin Rev (1992) 0.91
Robust replication of genotype-phenotype associations across multiple diseases in an electronic medical record. Am J Hum Genet (2010) 6.44
MedEx: a medication information extraction system for clinical narratives. J Am Med Inform Assoc (2010) 6.01
Electronic medical records for genetic research: results of the eMERGE consortium. Sci Transl Med (2011) 5.82
"Understanding" medical school curriculum content using KnowledgeMap. J Am Med Inform Assoc (2003) 5.19
Inactivating mutations in NPC1L1 and protection from coronary heart disease. N Engl J Med (2014) 4.94
Systematic comparison of phenome-wide association study of electronic medical record data and genome-wide association study data. Nat Biotechnol (2013) 4.85
The Electronic Medical Records and Genomics (eMERGE) Network: past, present, and future. Genet Med (2013) 4.37
Use of diverse electronic medical record systems to identify genetic risk for type 2 diabetes within a genome-wide association study. J Am Med Inform Assoc (2011) 4.20
Evaluation of the content coverage of SNOMED CT: ability of SNOMED clinical terms to represent clinical problem lists. Mayo Clin Proc (2006) 3.88
Evaluation of a method to identify and categorize section headers in clinical documents. J Am Med Inform Assoc (2009) 3.80
Interface terminologies: facilitating direct entry of clinical data into electronic health record systems. J Am Med Inform Assoc (2006) 3.76
Return of individual research results from genome-wide association studies: experience of the Electronic Medical Records and Genomics (eMERGE) Network. Genet Med (2012) 3.29
VA National Drug File Reference Terminology: a cross-institutional content coverage study. Stud Health Technol Inform (2004) 3.15
Automated acquisition of disease drug knowledge from biomedical and clinical documents: an initial study. J Am Med Inform Assoc (2007) 3.09
The anatomy of decision support during inpatient care provider order entry (CPOE): empirical observations from a decade of CPOE experience at Vanderbilt. J Biomed Inform (2005) 3.06
Validation of electronic medical record-based phenotyping algorithms: results and lessons learned from the eMERGE network. J Am Med Inform Assoc (2013) 3.00
Portability of an algorithm to identify rheumatoid arthritis in electronic health records. J Am Med Inform Assoc (2012) 2.94
Enhancing patient safety and quality of care by improving the usability of electronic health record systems: recommendations from AMIA. J Am Med Inform Assoc (2013) 2.90
Effect of CPOE user interface design on user-initiated access to educational and patient information during clinical care. J Am Med Inform Assoc (2005) 2.85
Computational phenotype discovery using unsupervised feature learning over noisy, sparse, and irregular clinical data. PLoS One (2013) 2.81
A study of machine-learning-based approaches to extract clinical entities and their assertions from discharge summaries. J Am Med Inform Assoc (2011) 2.70
Prompting clinicians about preventive care measures: a systematic review of randomized controlled trials. J Am Med Inform Assoc (2008) 2.60
Data from clinical notes: a perspective on the tension between structure and flexible documentation. J Am Med Inform Assoc (2011) 2.57
Commonly used surrogates for baseline renal function affect the classification and prognosis of acute kidney injury. Kidney Int (2009) 2.53
Prospective derivation and validation of a clinical prediction rule for recurrent Clostridium difficile infection. Gastroenterology (2008) 2.50
The impact of peer management on test-ordering behavior. Ann Intern Med (2004) 2.50
The disclosure of diagnosis codes can breach research participants' privacy. J Am Med Inform Assoc (2010) 2.45
Bacteria penetrate the normally impenetrable inner colon mucus layer in both murine colitis models and patients with ulcerative colitis. Gut (2013) 2.32
An evaluation of the NQF Quality Data Model for representing Electronic Health Record driven phenotyping algorithms. AMIA Annu Symp Proc (2012) 2.29
Assessing the accuracy of observer-reported ancestry in a biorepository linked to electronic medical records. Genet Med (2010) 2.09
Identifying QT prolongation from ECG impressions using a general-purpose Natural Language Processor. Int J Med Inform (2008) 2.07
Genome- and phenome-wide analyses of cardiac conduction identifies markers of arrhythmia risk. Circulation (2013) 2.06
Analyzing the heterogeneity and complexity of Electronic Health Record oriented phenotyping algorithms. AMIA Annu Symp Proc (2011) 2.03
Extracting timing and status descriptors for colonoscopy testing from electronic medical records. J Am Med Inform Assoc (2010) 1.94
Development and evaluation of a clinical note section header terminology. AMIA Annu Symp Proc (2008) 1.92
Experience in implementing inpatient clinical note capture via a provider order entry system. J Am Med Inform Assoc (2004) 1.85
Electronic health records-driven phenotyping: challenges, recent advances, and perspectives. J Am Med Inform Assoc (2013) 1.85
Importance of multi-modal approaches to effectively identify cataract cases from electronic health records. J Am Med Inform Assoc (2012) 1.79
Can graphene be used as a substrate for Raman enhancement? Nano Lett (2010) 1.78
NLP-based identification of pneumonia cases from free-text radiological reports. AMIA Annu Symp Proc (2008) 1.74
A model for evaluating interface terminologies. J Am Med Inform Assoc (2007) 1.73
Facilitating pharmacogenetic studies using electronic health records and natural-language processing: a case study of warfarin. J Am Med Inform Assoc (2011) 1.67
Complement receptor 1 gene variants are associated with erythrocyte sedimentation rate. Am J Hum Genet (2011) 1.66
Predicting warfarin dosage in European-Americans and African-Americans using DNA samples linked to an electronic health record. Pharmacogenomics (2012) 1.66
A hybrid system for temporal information extraction from clinical text. J Am Med Inform Assoc (2013) 1.63
Openness of patients' reporting with use of electronic records: psychiatric clinicians' views. J Am Med Inform Assoc (2010) 1.59
LncRNAs expression signatures of renal clear cell carcinoma revealed by microarray. PLoS One (2012) 1.59
A framework for evaluating the appropriateness of clinical decision support alerts and responses. J Am Med Inform Assoc (2011) 1.57
Naïve Electronic Health Record phenotype identification for Rheumatoid arthritis. AMIA Annu Symp Proc (2011) 1.56
Computer-based insulin infusion protocol improves glycemia control over manual protocol. J Am Med Inform Assoc (2007) 1.50
A genome- and phenome-wide association study to identify genetic variants influencing platelet count and volume and their pleiotropic effects. Hum Genet (2013) 1.47
Categorical information in pharmaceutical terminologies. AMIA Annu Symp Proc (2006) 1.46
Recognizing clinical entities in hospital discharge summaries using Structural Support Vector Machines with word representation features. BMC Med Inform Decis Mak (2013) 1.46
Associations of autoantibodies, autoimmune risk alleles, and clinical diagnoses from the electronic medical records in rheumatoid arthritis cases and non-rheumatoid arthritis controls. Arthritis Rheum (2013) 1.43
Large-scale prediction of adverse drug reactions using chemical, biological, and phenotypic properties of drugs. J Am Med Inform Assoc (2012) 1.43
Knowledge-driven multi-locus analysis reveals gene-gene interactions influencing HDL cholesterol level in two independent EMR-linked biobanks. PLoS One (2011) 1.42
An analytical approach to characterize morbidity profile dissimilarity between distinct cohorts using electronic medical records. J Biomed Inform (2010) 1.42
Reference standards in evaluating system performance. J Am Med Inform Assoc (2001) 1.41
Integrating existing natural language processing tools for medication extraction from discharge summaries. J Am Med Inform Assoc (2010) 1.41
Opioid use after cardiac surgery in children with Down syndrome. Pediatr Crit Care Med (2013) 1.40
Integrating "best of care" protocols into clinicians' workflow via care provider order entry: impact on quality-of-care indicators for acute myocardial infarction. J Am Med Inform Assoc (2005) 1.40
Toward a more informed patient: bridging health care information through an interactive communication portal. J Med Libr Assoc (2007) 1.39
A1 adenosine receptor knockout mice exhibit increased renal injury following ischemia and reperfusion. Am J Physiol Renal Physiol (2003) 1.38
The future state of clinical data capture and documentation: a report from AMIA's 2011 Policy Meeting. J Am Med Inform Assoc (2012) 1.38
Influence of source and drain contacts on the properties of indium-gallium-zinc-oxide thin-film transistors based on amorphous carbon nanofilm as barrier layer. ACS Appl Mater Interfaces (2015) 1.38
Applying active learning to high-throughput phenotyping algorithms for electronic health records data. J Am Med Inform Assoc (2013) 1.36
A flexible approach for highly multiplexed candidate gene targeted resequencing. PLoS One (2011) 1.35
Modulators of normal electrocardiographic intervals identified in a large electronic medical record. Heart Rhythm (2010) 1.35
Identifying UMLS concepts from ECG Impressions using KnowledgeMap. AMIA Annu Symp Proc (2005) 1.32
Biobanks and electronic medical records: enabling cost-effective research. Sci Transl Med (2014) 1.32
Opportunities for genomic clinical decision support interventions. Genet Med (2013) 1.31
A study of transportability of an existing smoking status detection module across institutions. AMIA Annu Symp Proc (2012) 1.31
Pragmatics of implementing guidelines on the front lines. J Am Med Inform Assoc (2004) 1.30
MyHealthAtVanderbilt: policies and procedures governing patient portal functionality. J Am Med Inform Assoc (2011) 1.28
Development and evaluation of an ensemble resource linking medications to their indications. J Am Med Inform Assoc (2013) 1.28
Combined use of fasting plasma glucose and glycated hemoglobin A1c in the screening of diabetes and impaired glucose tolerance. Acta Diabetol (2009) 1.26
Intronic miR-301 feedback regulates its host gene, ska2, in A549 cells by targeting MEOX2 to affect ERK/CREB pathways. Biochem Biophys Res Commun (2010) 1.23
Perceived increase in mortality after process and policy changes implemented with computerized physician order entry. Pediatrics (2006) 1.23
ICD-9 tobacco use codes are effective identifiers of smoking status. J Am Med Inform Assoc (2013) 1.22
Natural language processing improves identification of colorectal cancer testing in the electronic medical record. Med Decis Making (2011) 1.22
The use of a DNA biobank linked to electronic medical records to characterize pharmacogenomic predictors of tacrolimus dose requirement in kidney transplant recipients. Pharmacogenet Genomics (2012) 1.21
Generating Clinical Notes for Electronic Health Record Systems. Appl Clin Inform (2010) 1.19
DNA methylation-regulated miR-193a-3p dictates resistance of hepatocellular carcinoma to 5-fluorouracil via repression of SRSF2 expression. J Biol Chem (2011) 1.19
[Study on 1389 men who have sex with men regarding their HIV high-risk behaviors and associated factors in mainland China in 2004]. Zhonghua Liu Xing Bing Xue Za Zhi (2007) 1.19