Published in RNA on February 19, 2013
The Initiator Methionine tRNA Drives Secretion of Type II Collagen from Stromal Fibroblasts to Promote Tumor Growth and Angiogenesis. Curr Biol (2016) 1.43
tRNA fragments in human health and disease. FEBS Lett (2014) 1.41
tRNAs as regulators of biological processes. Front Genet (2014) 1.36
Loss of the RNA polymerase III repressor MAF1 confers obesity resistance. Genes Dev (2015) 1.08
Next generation sequencing profiling identifies miR-574-3p and miR-660-5p as potential novel prognostic markers for breast cancer. BMC Genomics (2015) 1.00
tRNA genes rapidly change in evolution to meet novel translational demands. Elife (2013) 0.96
Diversity of human tRNA genes from the 1000-genomes project. RNA Biol (2013) 0.92
Systematic identification of tRNAome and its dynamics in Lactococcus lactis. Mol Microbiol (2014) 0.92
New frontiers in translational control of the cancer genome. Nat Rev Cancer (2016) 0.92
High-resolution mapping of transcriptional dynamics across tissue development reveals a stable mRNA-tRNA interface. Genome Res (2014) 0.85
Controlling translation via modulation of tRNA levels. Wiley Interdiscip Rev RNA (2015) 0.83
ALKBH1-Mediated tRNA Demethylation Regulates Translation. Cell (2016) 0.83
The Levels of a Universally Conserved tRNA Modification Regulate Cell Growth. J Biol Chem (2015) 0.82
Four-leaf clover qRT-PCR: A convenient method for selective quantification of mature tRNA. RNA Biol (2015) 0.80
tRNA modifying enzymes, NSUN2 and METTL1, determine sensitivity to 5-fluorouracil in HeLa cells. PLoS Genet (2014) 0.80
Removing roadblocks to deep sequencing of modified RNAs. Nat Methods (2015) 0.78
Maf1, A New PTEN Target Linking RNA and Lipid Metabolism. Trends Endocrinol Metab (2016) 0.77
A dual fluorescent reporter for the investigation of methionine mistranslation in live cells. RNA (2016) 0.77
TRM6/61 connects PKCα with translational control through tRNAi(Met) stabilization: impact on tumorigenesis. Oncogene (2015) 0.76
Interaction of tRNA with MEK2 in pancreatic cancer cells. Sci Rep (2016) 0.75
Tissue- and Time-Specific Expression of Otherwise Identical tRNA Genes. PLoS Genet (2016) 0.75
Transcription by RNA polymerase III: insights into mechanism and regulation. Biochem Soc Trans (2016) 0.75
Multiple Layers of Stress-Induced Regulation in tRNA Biology. Life (Basel) (2016) 0.75
Evolution of initiator tRNAs and selection of methionine as the initiating amino acid. RNA Biol (2016) 0.75
The initiator methionine tRNA drives cell migration and invasion leading to increased metastatic potential in melanoma. Biol Open (2016) 0.75
Regulating maf1 expression and its expanding biological functions. PLoS Genet (2015) 0.75
Regulation of translation dynamic and neoplastic conversion by tRNA and their pieces. Translation (Austin) (2014) 0.75
Genome-wide profiling of transfer RNAs and their role as novel prognostic markers for breast cancer. Sci Rep (2016) 0.75
Translational Dysregulation in Cancer: Molecular Insights and Potential Clinical Applications in Biomarker Development. Front Oncol (2017) 0.75
A new yeast poly(A) polymerase complex involved in RNA quality control. PLoS Biol (2005) 5.43
Nuclear surveillance and degradation of hypomodified initiator tRNAMet in S. cerevisiae. Genes Dev (2004) 4.61
Tissue-specific differences in human transfer RNA expression. PLoS Genet (2006) 4.10
tRNA biology charges to the front. Genes Dev (2010) 4.07
tRNA's wobble decoding of the genome: 40 years of modification. J Mol Biol (2006) 4.06
Rapid tRNA decay can result from lack of nonessential modifications. Mol Cell (2006) 3.86
The RNA polymerase III transcription apparatus. J Mol Biol (2001) 3.31
The expanding RNA polymerase III transcriptome. Trends Genet (2007) 3.07
The essential Gcd10p-Gcd14p nuclear complex is required for 1-methyladenosine modification and maturation of initiator methionyl-tRNA. Genes Dev (1998) 2.75
tRNA over-expression in breast cancer and functional consequences. Nucleic Acids Res (2009) 2.08
Lost in translation: dysregulation of cap-dependent translation and cancer. Cancer Cell (2004) 1.91
Exploring the regulation of tRNA distribution on the genomic scale. J Mol Biol (2004) 1.80
Expression of neural BC200 RNA in human tumours. J Pathol (1997) 1.70
RNA polymerase III transcription factor TFIIIC2 is overexpressed in ovarian tumors. Proc Natl Acad Sci U S A (2000) 1.64
Non-coding RNA production by RNA polymerase III is implicated in cancer. Nat Rev Cancer (2008) 1.62
Role of a tRNA base modification and its precursors in frameshifting in eukaryotes. J Biol Chem (2007) 1.27
Aberrant mRNA translation in cancer pathogenesis: an old concept revisited comes finally of age. Oncogene (2004) 1.26
High levels of tRNA abundance and alteration of tRNA charging by bortezomib in multiple myeloma. Biochem Biophys Res Commun (2009) 1.23
Over expression of a tRNA(Leu) isoacceptor changes charging pattern of leucine tRNAs and reveals new codon reading. J Mol Biol (2005) 1.22
Site-directed in vitro replacement of nucleosides in the anticodon loop of tRNA: application to the study of structural requirements for queuine insertase activity. EMBO J (1983) 1.14
Profiling non-lysyl tRNAs in HIV-1. RNA (2009) 1.14
Import of amber and ochre suppressor tRNAs into mammalian cells: a general approach to site-specific insertion of amino acid analogues into proteins. Proc Natl Acad Sci U S A (2001) 1.11
Suppression of nonsense mutations in cell culture and mice by multimerized suppressor tRNA genes. Mol Cell Biol (2000) 1.07
In vivo overexpression and purification of Escherichia coli tRNA(ser). FEBS Lett (1993) 0.98
Expression of neural BC1 RNA: induction in murine tumours. Eur J Cancer (1997) 0.97
Chimeric tRNAs as tools to induce proteome damage and identify components of stress responses. Nucleic Acids Res (2009) 0.88
N6-methyladenosine in nuclear RNA is a major substrate of the obesity-associated FTO. Nat Chem Biol (2011) 5.96
An evolutionarily conserved mechanism for controlling the efficiency of protein translation. Cell (2010) 4.45
Tissue-specific differences in human transfer RNA expression. PLoS Genet (2006) 4.10
Codon-usage-based inhibition of HIV protein synthesis by human schlafen 11. Nature (2012) 2.98
Basis for structural diversity in homologous RNAs. Science (2004) 2.70
Crystal structure of the specificity domain of ribonuclease P. Nature (2003) 2.69
Innate immune and chemically triggered oxidative stress modifies translational fidelity. Nature (2009) 2.50
Selective charging of tRNA isoacceptors induced by amino-acid starvation. EMBO Rep (2005) 2.48
Structure of a bacterial ribonuclease P holoenzyme in complex with tRNA. Nature (2010) 2.40
Leucine-tRNA initiates at CUG start codons for protein synthesis and presentation by MHC class I. Science (2012) 2.30
Crystal structure of the RNA component of bacterial ribonuclease P. Nature (2005) 2.10
tRNA over-expression in breast cancer and functional consequences. Nucleic Acids Res (2009) 2.08
Diversity of tRNA genes in eukaryotes. Nucleic Acids Res (2006) 2.05
Exploring the regulation of tRNA distribution on the genomic scale. J Mol Biol (2004) 1.80
The AlkB domain of mammalian ABH8 catalyzes hydroxylation of 5-methoxycarbonylmethyluridine at the wobble position of tRNA. Angew Chem Int Ed Engl (2010) 1.76
HMGA2/TET1/HOXA9 signaling pathway regulates breast cancer growth and metastasis. Proc Natl Acad Sci U S A (2013) 1.70
Single-molecule studies highlight conformational heterogeneity in the early folding steps of a large ribozyme. Proc Natl Acad Sci U S A (2004) 1.69
Identification of recognition residues for ligation-based detection and quantitation of pseudouridine and N6-methyladenosine. Nucleic Acids Res (2007) 1.66
Genome-wide analysis of tRNA charging and activation of the eIF2 kinase Gcn2p. J Biol Chem (2009) 1.64
The absence of NF-kappaB-mediated inhibition of c-Jun N-terminal kinase activation contributes to tumor necrosis factor alpha-induced apoptosis. Mol Cell Biol (2002) 1.61
A role for tRNA modifications in genome structure and codon usage. Cell (2012) 1.57
Real-time RNA profiling within a single bacterium. Proc Natl Acad Sci U S A (2005) 1.56
RNA folding: models and perspectives. Curr Opin Struct Biol (2003) 1.56
Intercellular transfer of the cellular prion protein. J Biol Chem (2002) 1.54
Genome-wide identification and quantitative analysis of cleaved tRNA fragments induced by cellular stress. J Biol Chem (2012) 1.47
NF-kappaB is required for UV-induced JNK activation via induction of PKCdelta. Mol Cell (2006) 1.41
Probing N6-methyladenosine RNA modification status at single nucleotide resolution in mRNA and long noncoding RNA. RNA (2013) 1.37
Folding of noncoding RNAs during transcription facilitated by pausing-induced nonnative structures. Proc Natl Acad Sci U S A (2007) 1.36
Genome-wide analysis of N1-methyl-adenosine modification in human tRNAs. RNA (2010) 1.33
A multicenter application and evaluation of the oxford classification of IgA nephropathy in adult chinese patients. Am J Kidney Dis (2012) 1.32
Structure of a folding intermediate reveals the interplay between core and peripheral elements in RNA folding. J Mol Biol (2005) 1.31
Cellular dynamics of RNA modification. Acc Chem Res (2011) 1.28
Modulation of the MAP kinase signaling cascade by Raf kinase inhibitory protein. Cell Res (2005) 1.23
High levels of tRNA abundance and alteration of tRNA charging by bortezomib in multiple myeloma. Biochem Biophys Res Commun (2009) 1.23
A self-defeating anabolic program leads to β-cell apoptosis in endoplasmic reticulum stress-induced diabetes via regulation of amino acid flux. J Biol Chem (2013) 1.22
Integration of general amino acid control and target of rapamycin (TOR) regulatory pathways in nitrogen assimilation in yeast. J Biol Chem (2010) 1.20
Analysis of RNA base modification and structural rearrangement by single-molecule real-time detection of reverse transcription. J Nanobiotechnology (2013) 1.19
Phase-changing sacrificial materials for solvent bonding of high-performance polymeric capillary electrophoresis microchips. Anal Chem (2005) 1.19
High-resolution N(6) -methyladenosine (m(6) A) map using photo-crosslinking-assisted m(6) A sequencing. Angew Chem Int Ed Engl (2014) 1.18
N6-methyladenosine–encoded epitranscriptomics. Nat Struct Mol Biol (2016) 1.17
Structure of ribonuclease P--a universal ribozyme. Curr Opin Struct Biol (2006) 1.16
HIV-1 modulates the tRNA pool to improve translation efficiency. Mol Biol Evol (2011) 1.16
Profiling non-lysyl tRNAs in HIV-1. RNA (2009) 1.14
Functional analysis of human tRNA isodecoders. J Mol Biol (2009) 1.13
A systematic, ligation-based approach to study RNA modifications. RNA (2006) 1.10
Misacylation of tRNA with methionine in Saccharomyces cerevisiae. Nucleic Acids Res (2012) 1.08
Oxidative stress-mediated down-regulation of bcl-2 promoter in hippocampal neurons. J Neurochem (2003) 1.07
Misacylation of specific nonmethionyl tRNAs by a bacterial methionyl-tRNA synthetase. Proc Natl Acad Sci U S A (2011) 1.07
Transcriptional pausing coordinates folding of the aptamer domain and the expression platform of a riboswitch. Proc Natl Acad Sci U S A (2012) 1.07
Syntheses of two 5-hydroxymethyl-2'-deoxycytidine phosphoramidites with TBDMS as the 5-hydroxymethyl protecting group and their incorporation into DNA. J Org Chem (2011) 1.07
Reversible and rapid transfer-RNA deactivation as a mechanism of translational repression in stress. PLoS Genet (2013) 1.05
Downregulation of RKIP is associated with poor outcome and malignant progression in gliomas. PLoS One (2012) 1.04
Affinity monolith-integrated poly(methyl methacrylate) microchips for on-line protein extraction and capillary electrophoresis. Anal Chem (2008) 1.04
A study of the lengthening and contractility of the surgical margins in digestive tract cancer. Am J Surg (2004) 1.01
Prion protein is ubiquitinated after developing protease resistance in the brains of scrapie-infected mice. J Pathol (2004) 1.01
Efficient fluorescence labeling of a large RNA through oligonucleotide hybridization. RNA (2004) 0.99
Affinity monolith preconcentrators for polymer microchip capillary electrophoresis. Electrophoresis (2008) 0.98
Folding of a universal ribozyme: the ribonuclease P RNA. Q Rev Biophys (2007) 0.98
RNA folding during transcription: protocols and studies. Methods Enzymol (2009) 0.97
Single-molecule nonequilibrium periodic Mg2+-concentration jump experiments reveal details of the early folding pathways of a large RNA. Proc Natl Acad Sci U S A (2008) 0.96
Regulation of chaperone effects on a yeast prion by cochaperone Sgt2. Mol Cell Biol (2012) 0.96
Human bronchial smooth muscle cell lines show a hypertrophic phenotype typical of severe asthma. Am J Respir Crit Care Med (2003) 0.96
Langerhans' cell histiocytosis of the spine in children with soft tissue extension and chemotherapy. Int Orthop (2008) 0.95
Environmental perturbations lift the degeneracy of the genetic code to regulate protein levels in bacteria. Proc Natl Acad Sci U S A (2012) 0.95
Surface-modified poly(methyl methacrylate) capillary electrophoresis microchips for protein and peptide analysis. Anal Chem (2004) 0.95
Dimeric and monomeric Bacillus subtilis RNase P holoenzyme in the absence and presence of pre-tRNA substrates. Biochemistry (2002) 0.94
ERK7 expression and kinase activity is regulated by the ubiquitin-proteosome pathway. J Biol Chem (2004) 0.93
Structural basis for altering the stability of homologous RNAs from a mesophilic and a thermophilic bacterium. RNA (2006) 0.92
Extended structures in RNA folding intermediates are due to nonnative interactions rather than electrostatic repulsion. J Mol Biol (2010) 0.92
Mid-infrared spectroscopic measurement of ionic dissociative materials in the metabolic pathway. Appl Spectrosc (2003) 0.92
RKIP inhibition in cervical cancer is associated with higher tumor aggressive behavior and resistance to cisplatin therapy. PLoS One (2013) 0.89
Selective control of amino acid metabolism by the GCN2 eIF2 kinase pathway in Saccharomyces cerevisiae. BMC Biochem (2010) 0.89
Additional bedtime H2-receptor antagonist for the control of nocturnal gastric acid breakthrough. Cochrane Database Syst Rev (2004) 0.89
A large collapsed-state RNA can exhibit simple exponential single-molecule dynamics. J Mol Biol (2008) 0.89
Endoscopic mucosal resection for early gastric cancer. Cochrane Database Syst Rev (2009) 0.89
Rationalization and prediction of selective decoding of pseudouridine-modified nonsense and sense codons. RNA (2012) 0.88
Discovering RNA-protein interactome by using chemical context profiling of the RNA-protein interface. Cell Rep (2013) 0.88
Meta-analysis of randomized controlled trials on laparoscopic gastrectomy vs. open gastrectomy for distal gastric cancer. Hepatogastroenterology (2012) 0.87
tRNA: Vast reservoir of RNA molecules with unexpected regulatory function. Proc Natl Acad Sci U S A (2011) 0.86
Vaccinia and influenza A viruses select rather than adjust tRNAs to optimize translation. Nucleic Acids Res (2012) 0.86
Interaction of the Bacillus subtilis RNase P with the 30S ribosomal subunit. RNA (2004) 0.86
Minute gastric carcinoid tumor with regional lymph node metastasis: a case report and review of literature. World J Gastroenterol (2004) 0.86
Percutaneous CT-guided radiofrequency ablation as supplemental therapy after systemic chemotherapy for selected advanced non-small cell lung cancers. AJR Am J Roentgenol (2013) 0.84
Malignant granular cell tumor with breast metastasis: A case report and review of the literature. Oncol Lett (2012) 0.84
Characterization of the Raf kinase inhibitory protein (RKIP) binding pocket: NMR-based screening identifies small-molecule ligands. PLoS One (2010) 0.83
Distinct functions of erythropoietin and stem cell factor are linked to activation of mTOR kinase signaling pathway in human erythroid progenitors. Cytokine (2012) 0.83
NMR assignment of rat Raf kinase inhibitor protein. J Biomol NMR (2006) 0.83
Efficient chemical synthesis of AppDNA by adenylation of immobilized DNA-5'-monophosphate. Org Lett (2009) 0.83
Celastrol inhibits vasculogenesis by suppressing the VEGF-induced functional activity of bone marrow-derived endothelial progenitor cells. Biochem Biophys Res Commun (2012) 0.82
Electrical Stimulation of the Cochlea to Reduce Tinnitus. Semin Hear (2008) 0.82
Genome-wide analysis of aminoacylation (charging) levels of tRNA using microarrays. J Vis Exp (2010) 0.82
Discrete structure of an RNA folding intermediate revealed by cryo-electron microscopy. J Am Chem Soc (2010) 0.82