Published in Plant Cell Rep on October 17, 2013
The First High-Density Genetic Map Construction in Tree Peony (Paeonia Sect. Moutan) using Genotyping by Specific-Locus Amplified Fragment Sequencing. PLoS One (2015) 0.90
Fatty acid composition of developing tree peony (Paeonia section Moutan DC.) seeds and transcriptome analysis during seed development. BMC Genomics (2015) 0.85
Transcriptomic Analysis of Paeonia delavayi Wild Population Flowers to Identify Differentially Expressed Genes Involved in Purple-Red and Yellow Petal Pigmentation. PLoS One (2015) 0.79
Ethylene resistance in flowering ornamental plants - improvements and future perspectives. Hortic Res (2015) 0.77
Construction of a high-density genetic map for grape using specific length amplified fragment (SLAF) sequencing. PLoS One (2017) 0.75
Mapping and quantifying mammalian transcriptomes by RNA-Seq. Nat Methods (2008) 126.81
RNA-Seq: a revolutionary tool for transcriptomics. Nat Rev Genet (2009) 58.77
Full-length transcriptome assembly from RNA-Seq data without a reference genome. Nat Biotechnol (2011) 53.86
Blast2GO: a universal tool for annotation, visualization and analysis in functional genomics research. Bioinformatics (2005) 46.40
SOAP2: an improved ultrafast tool for short read alignment. Bioinformatics (2009) 39.47
The significance of digital gene expression profiles. Genome Res (1997) 23.90
WEGO: a web tool for plotting GO annotations. Nucleic Acids Res (2006) 13.06
ESTScan: a program for detecting, evaluating, and reconstructing potential coding regions in EST sequences. Proc Int Conf Intell Syst Mol Biol (1999) 9.18
Sugar sensing and signaling in plants: conserved and novel mechanisms. Annu Rev Plant Biol (2006) 7.03
Role of the Arabidopsis glucose sensor HXK1 in nutrient, light, and hormonal signaling. Science (2003) 5.41
De novo characterization of a whitefly transcriptome and analysis of its gene expression during development. BMC Genomics (2010) 5.17
NAC transcription factors: structurally distinct, functionally diverse. Trends Plant Sci (2005) 4.34
Sugar sensing in higher plants. Plant Cell (1994) 4.26
The ethylene signaling pathway: new insights. Curr Opin Plant Biol (2004) 4.12
EIN3-dependent regulation of plant ethylene hormone signaling by two arabidopsis F box proteins: EBF1 and EBF2. Cell (2003) 4.09
Sugar sensing and signaling in plants. Plant Cell (2002) 4.05
THE FUNCTIONS AND REGULATION OF GLUTATHIONE S-TRANSFERASES IN PLANTS. Annu Rev Plant Physiol Plant Mol Biol (1996) 3.93
SUGAR-INDUCED SIGNAL TRANSDUCTION IN PLANTS. Annu Rev Plant Physiol Plant Mol Biol (2000) 3.71
De novo assembly and characterization of root transcriptome using Illumina paired-end sequencing and development of cSSR markers in sweet potato (Ipomoea batatas). BMC Genomics (2010) 3.32
Differential regulation of EIN3 stability by glucose and ethylene signalling in plants. Nature (2003) 3.14
Sugar and hormone connections. Trends Plant Sci (2003) 2.77
Ethylene signal transduction. Ann Bot (2005) 2.71
Sugars as signaling molecules. Curr Opin Plant Biol (1999) 2.62
Control of plant development and gene expression by sugar signaling. Curr Opin Plant Biol (2005) 2.50
Characterization of transcriptional complexity during berry development in Vitis vinifera using RNA-Seq. Plant Physiol (2010) 2.46
Recent advances in ethylene research. J Exp Bot (2009) 2.43
Role of DREB transcription factors in abiotic and biotic stress tolerance in plants. Plant Cell Rep (2006) 2.38
Enzymes of ethylene biosynthesis. Plant Physiol (1989) 2.13
Get ready to GO! A biologist's guide to the Gene Ontology. Brief Bioinform (2005) 2.11
Sugar signals and molecular networks controlling plant growth. Curr Opin Plant Biol (2010) 2.03
Ethylene-induced stabilization of ETHYLENE INSENSITIVE3 and EIN3-LIKE1 is mediated by proteasomal degradation of EIN3 binding F-box 1 and 2 that requires EIN2 in Arabidopsis. Plant Cell (2010) 1.96
Plant sugar-response pathways. Part of a complex regulatory web. Plant Physiol (2000) 1.91
Establishing glucose- and ABA-regulated transcription networks in Arabidopsis by microarray analysis and promoter classification using a Relevance Vector Machine. Genome Res (2006) 1.89
Combining SNP discovery from next-generation sequencing data with bulked segregant analysis (BSA) to fine-map genes in polyploid wheat. BMC Plant Biol (2012) 1.88
Iron deficiency-mediated stress regulation of four subgroup Ib BHLH genes in Arabidopsis thaliana. Planta (2007) 1.58
Physiology and molecular biology of petal senescence. J Exp Bot (2008) 1.55
A comprehensive expression analysis of the WRKY gene superfamily in rice plants during defense response. Plant Cell Rep (2006) 1.44
Interaction between sugar and abscisic acid signalling during early seedling development in Arabidopsis. Plant Mol Biol (2008) 1.30
De novo sequencing and a comprehensive analysis of purple sweet potato (Impomoea batatas L.) transcriptome. Planta (2012) 1.29
Comprehensive analysis of cytosolic Nudix hydrolases in Arabidopsis thaliana. J Biol Chem (2005) 1.27
Glucose-induced delay of seed germination in rice is mediated by the suppression of ABA catabolism rather than an enhancement of ABA biosynthesis. Plant Cell Physiol (2009) 1.17
Sucrose prevents up-regulation of senescence-associated genes in carnation petals. J Exp Bot (2007) 1.17
Sugar sensing and signaling. Arabidopsis Book (2008) 1.15
Rh-PIP2;1, a rose aquaporin gene, is involved in ethylene-regulated petal expansion. Plant Physiol (2008) 1.13
Transcriptomic analysis of rice (Oryza sativa) developing embryos using the RNA-Seq technique. PLoS One (2012) 1.08
Abiotic stress and ABA-inducible Group 4 LEA from Brassica napus plays a key role in salt and drought tolerance. J Biotechnol (2008) 1.03
Transcriptome analysis of the roots at early and late seedling stages using Illumina paired-end sequencing and development of EST-SSR markers in radish. Plant Cell Rep (2012) 1.00
Transcriptome analysis of carnation (Dianthus caryophyllus L.) based on next-generation sequencing technology. BMC Genomics (2012) 1.00
Transcriptome analysis of tree peony during chilling requirement fulfillment: assembling, annotation and markers discovering. Gene (2011) 0.99
DREB1/CBF transcription factors: their structure, function and role in abiotic stress tolerance in plants. J Genet (2012) 0.96
Identification and expression analysis of ERF transcription factor genes in petunia during flower senescence and in response to hormone treatments. J Exp Bot (2010) 0.94
Functional annotation of expressed sequence tags as a tool to understand the molecular mechanism controlling flower bud development in tree peony. Physiol Plant (2009) 0.84
Transcriptome profiling and in silico analysis of somatic embryos in Japanese larch (Larix leptolepis). Plant Cell Rep (2012) 0.83
Transcriptome sequencing of the Antarctic vascular plant Deschampsia antarctica Desv. under abiotic stress. Planta (2012) 0.83
Multicenter implementation of a severe sepsis and septic shock treatment bundle. Am J Respir Crit Care Med (2013) 2.52
HIV envelope-CXCR4 signaling activates cofilin to overcome cortical actin restriction in resting CD4 T cells. Cell (2008) 2.46
Changes associated with the development of resistance to imatinib (STI571) in two leukemia cell lines expressing p210 Bcr/Abl protein. Cancer (2004) 1.75
Pharmacokinetics and safety of oral posaconazole in neutropenic stem cell transplant recipients. Antimicrob Agents Chemother (2006) 1.75
Podoplanin maintains high endothelial venule integrity by interacting with platelet CLEC-2. Nature (2013) 1.61
Interleukin-18 improves the early defence system against influenza virus infection by augmenting natural killer cell-mediated cytotoxicity. J Gen Virol (2004) 1.58
Msh3 is a limiting factor in the formation of intergenerational CTG expansions in DM1 transgenic mice. Hum Genet (2006) 1.55
An efficient system to detect protein ubiquitination by agroinfiltration in Nicotiana benthamiana. Plant J (2009) 1.49
Unraveling the origin of exponential law in intra-urban human mobility. Sci Rep (2013) 1.49
A CRISPR/Cas9 toolkit for multiplex genome editing in plants. BMC Plant Biol (2014) 1.37
A crucial role for hydrogen sulfide in oxygen sensing via modulating large conductance calcium-activated potassium channels. Antioxid Redox Signal (2010) 1.34
Platelets mediate lymphovenous hemostasis to maintain blood-lymphatic separation throughout life. J Clin Invest (2014) 1.30
MR imaging of carotid plaque composition during lipid-lowering therapy a prospective assessment of effect and time course. JACC Cardiovasc Imaging (2011) 1.29
Down-regulation of osteopontin suppresses growth and metastasis of hepatocellular carcinoma via induction of apoptosis. Gastroenterology (2008) 1.27
Carotid intraplaque hemorrhage imaging at 3.0-T MR imaging: comparison of the diagnostic performance of three T1-weighted sequences. Radiology (2010) 1.24
TIP30/CC3 expression in breast carcinoma: relation to metastasis, clinicopathologic parameters, and P53 expression. Hum Pathol (2006) 1.16
TIP30 induces apoptosis under oxidative stress through stabilization of p53 messenger RNA in human hepatocellular carcinoma. Cancer Res (2008) 1.15
Core 1-derived O-glycans are essential E-selectin ligands on neutrophils. Proc Natl Acad Sci U S A (2010) 1.13
Inhibition of adenine nucleotide translocator pore function and protection against apoptosis in vivo by an HIV protease inhibitor. J Clin Invest (2005) 1.13
Utilization of microbial iron assimilation processes for the development of new antibiotics and inspiration for the design of new anticancer agents. Biometals (2009) 1.12
Antithrombotic and thrombolytic therapy for valvular disease: can this guideline apply to Chinese? Chest (2013) 1.12
Therapeutic potential of oligonucleotides expressing immunosuppressive TTAGGG motifs. Ann N Y Acad Sci (2005) 1.10
Automated and fast building of three-dimensional RNA structures. Sci Rep (2012) 1.10
Endogenous TGF-beta activation by reactive oxygen species is key to Foxp3 induction in TCR-stimulated and HIV-1-infected human CD4+CD25- T cells. Retrovirology (2007) 1.10
Single nucleotide polymorphisms that were identified in affective mood disorders affect ATP-activated P2X7 receptor functions. J Psychiatr Res (2009) 1.10
Genome-wide analysis of S-Locus F-box-like genes in Arabidopsis thaliana. Plant Mol Biol (2005) 1.09
Increased expression of integrin-linked kinase attenuates left ventricular remodeling and improves cardiac function after myocardial infarction. Circulation (2009) 1.08
RNA-dependent RNA polymerase 1 from Nicotiana tabacum suppresses RNA silencing and enhances viral infection in Nicotiana benthamiana. Plant Cell (2010) 1.07
Human epididymis protein 4 (HE4) as a serum tumor biomarker in patients with ovarian carcinoma. Int J Gynecol Cancer (2011) 1.04
Subclinical carotid atherosclerosis: short-term natural history of lipid-rich necrotic core--a multicenter study with MR imaging. Radiology (2013) 1.03
Local critical stress correlates better than global maximum stress with plaque morphological features linked to atherosclerotic plaque vulnerability: an in vivo multi-patient study. Biomed Eng Online (2009) 1.03
Nasal ventilation alters mesenchymal cell turnover and improves alveolarization in preterm lambs. Am J Respir Crit Care Med (2008) 1.03
Structural shifts of gut microbiota as surrogate endpoints for monitoring host health changes induced by carcinogen exposure. FEMS Microbiol Ecol (2010) 1.03
Synthesis of chiral chromans by the Pd-catalyzed asymmetric allylic alkylation (AAA): scope, mechanism, and applications. J Am Chem Soc (2004) 1.02
Hemorrhage and large lipid-rich necrotic cores are independently associated with thin or ruptured fibrous caps: an in vivo 3T MRI study. Arterioscler Thromb Vasc Biol (2009) 1.01
Advanced glycation end products impair function of late endothelial progenitor cells through effects on protein kinase Akt and cyclooxygenase-2. Biochem Biophys Res Commun (2009) 0.99
PI(4,5)P2 5-phosphatase A regulates PI3K/Akt signalling and has a tumour suppressive role in human melanoma. Nat Commun (2013) 0.97
Total synthesis of (+)-allocyathin B2. J Am Chem Soc (2005) 0.97
2-Deoxy-D-glucose enhances TRAIL-induced apoptosis in human melanoma cells through XBP-1-mediated up-regulation of TRAIL-R2. Mol Cancer (2009) 0.97
Avascular necrosis of femoral and/or humeral heads in multiple myeloma: results of a prospective study of patients treated with dexamethasone-based regimens and high-dose chemotherapy. J Clin Oncol (2005) 0.95
Characterization of a microbial consortium capable of degrading lignocellulose. Bioresour Technol (2011) 0.95
Identification of pore residues engaged in determining divalent cationic permeation in transient receptor potential melastatin subtype channel 2. J Biol Chem (2008) 0.95
Minimization of MR contrast weightings for the comprehensive evaluation of carotid atherosclerotic disease. Invest Radiol (2010) 0.95
Activation of protease-activated receptor (PAR) 1 by frog trefoil factor (TFF) 2 and PAR4 by human TFF2. Cell Mol Life Sci (2011) 0.94
Instability of chromosome number and DNA methylation variation induced by hybridization and amphidiploid formation between Raphanus sativus L. and Brassica alboglabra Bailey. BMC Plant Biol (2010) 0.94
A highly conserved baculovirus gene p48 (ac103) is essential for BV production and ODV envelopment. Virology (2008) 0.94
Unusual effects in the pd-catalyzed asymmetric allylic alkylations: synthesis of chiral chromans. J Am Chem Soc (2003) 0.93
Lymph flow regulates collecting lymphatic vessel maturation in vivo. J Clin Invest (2015) 0.93
Volume-related differences in emergency department performance. Jt Comm J Qual Patient Saf (2012) 0.92
MISSA is a highly efficient in vivo DNA assembly method for plant multiple-gene transformation. Plant Physiol (2010) 0.92
Adventitial perfusion and intraplaque hemorrhage: a dynamic contrast-enhanced MRI study in the carotid artery. Stroke (2013) 0.91
Sexually transmitted infections among heterosexual male clients of female sex workers in China: a systematic review and meta-analysis. PLoS One (2013) 0.91
Identifying the genome-wide sequence variations and developing new molecular markers for genetics research by re-sequencing a Landrace cultivar of foxtail millet. PLoS One (2013) 0.90
Mutational analysis of the FXNPXY motif within LDL receptor-related protein 1 (LRP1) reveals the functional importance of the tyrosine residues in cell growth regulation and signal transduction. Biochem J (2008) 0.89
Degradation of circulating von Willebrand factor and its regulator ADAMTS13 implicates secreted Bacillus anthracis metalloproteases in anthrax consumptive coagulopathy. J Biol Chem (2008) 0.89
Entire genome sequence analysis of genotype IX Newcastle disease viruses reveals their early-genotype phylogenetic position and recent-genotype genome size. Virol J (2011) 0.88
Lenalidomide inhibits lymphangiogenesis in preclinical models of mantle cell lymphoma. Cancer Res (2013) 0.88
In vitro effects of STI 571-containing drug combinations on the growth of Philadelphia-positive chronic myelogenous leukemia cells. Cancer (2002) 0.88
Regulation of nestin expression after cortical ablation in adult rat brain. Brain Res (2004) 0.87
Size-dependent properties of M-PEIs nanogels for gene delivery in cancer cells. Int J Pharm (2007) 0.87
Retroviral endostatin gene transfer inhibits human colon cancer cell growth in vivo. Chin Med J (Engl) (2003) 0.87
[Development of alpha-glucosidase inhibitor from medicinal herbs]. Zhongguo Zhong Yao Za Zhi (2010) 0.87
Iron chelation properties of an extracellular siderophore exochelin MN. J Am Chem Soc (2003) 0.86
Exploiting the Pd- and Ru-catalyzed cycloisomerizations: enantioselective total synthesis of (+)-allocyathin B2. J Am Chem Soc (2005) 0.86
Effect of high glucose concentration on VEGF and PEDF expression in cultured retinal Müller cells. Mol Biol Rep (2008) 0.86
Antibacterial and anti-inflammatory effects of extracts and fractions from Polygonum capitatum. J Ethnopharmacol (2011) 0.86
Discovery of mouse spleen signaling responses to anthrax using label-free quantitative phosphoproteomics via mass spectrometry. Mol Cell Proteomics (2010) 0.86
Localized measurement of atherosclerotic plaque inflammatory burden with dynamic contrast-enhanced MRI. Magn Reson Med (2010) 0.85
[Low Intensity Anticoagulation Therapy for Chinese Population with Heart Valve Replacement--3 000 Cases Follow-up]. Sichuan Da Xue Xue Bao Yi Xue Ban (2016) 0.85
Application of polyphenylmethylsiloxane coated fiber for solid-phase microextraction combined with microwave-assisted extraction for the determination of organochlorine pesticides in Chinese teas. J Chromatogr A (2003) 0.85
PKC translocation and ERK1/2 activation in compensated right ventricular hypertrophy secondary to chronic emphysema. BMC Physiol (2005) 0.84
The role of metabotropic glutamate receptor mGlu5 in control of micturition and bladder nociception. Neurosci Lett (2008) 0.84
Current techniques for MR imaging of atherosclerosis. Top Magn Reson Imaging (2009) 0.84
Quantitative determination of compounds in tobacco essential oils by comprehensive two-dimensional gas chromatography coupled to time-of-flight mass spectrometry. J Chromatogr A (2005) 0.84
A novel lignin degradation bacterial consortium for efficient pulping. Bioresour Technol (2013) 0.84
Heterologous expression of lipoprotein-associated phospholipase A2 in different expression systems. Protein Expr Purif (2006) 0.84
A novel mutation in the transmembrane region of glyco-protein IX associated with Bernard-Soulier syndrome. Thromb Haemost (2004) 0.84
Pediatric stroke: clinical characteristics, acute care utilization patterns, and mortality. Childs Nerv Syst (2010) 0.84
Hyperpolarization-activated cyclic nucleotide-gated cation channel subtypes differentially modulate the excitability of murine small intestinal afferents. World J Gastroenterol (2012) 0.83
Ion channel and receptor mechanisms of bladder afferent nerve sensitivity. Auton Neurosci (2009) 0.83
Prevention of lipopolysaccharide-induced injury by 3,5-dicaffeoylquinic acid in endothelial cells. Acta Pharmacol Sin (2007) 0.82
Extraction of the surface trap level from photoluminescence: a case study of ZnO nanostructures. Phys Chem Chem Phys (2011) 0.82
Quantitative evaluation of high intensity signal on MIP images of carotid atherosclerotic plaques from routine TOF-MRA reveals elevated volumes of intraplaque hemorrhage and lipid rich necrotic core. J Cardiovasc Magn Reson (2012) 0.81
Proteomic analysis of differential protein expression in human nasopharyngeal carcinoma cells induced by NAG7 transfection. Proteomics (2002) 0.81
[Hepatitis B e antigen from chronic hepatitis B patients induces Th1/Th2 cytokine imbalance in vitro]. Zhonghua Gan Zang Bing Za Zhi (2013) 0.81
[A prospective cohort study of risk factors for ventilator-associated pneumonia in intensive care unit]. Zhonghua Nei Ke Za Zhi (2004) 0.81
Local immune responses to influenza virus infection in mice with a targeted disruption of perforin gene. Microb Pathog (2003) 0.81
Stabilization of alpha-chymotrypsin by covalent immobilization on amine-functionalized superparamagnetic nanogel. J Biotechnol (2006) 0.81
Turbo fast three-dimensional carotid artery black-blood MRI by combining three-dimensional MERGE sequence with compressed sensing. Magn Reson Med (2012) 0.80
Selective synthesis of seven- and eight-membered ring sultams via two tandem reaction protocols from one starting material. Org Lett (2012) 0.80
Analgesic and anti-inflammatory effects of the amphibian neurotoxin, anntoxin. Biochimie (2011) 0.80
Sensitivity of bronchopulmonary receptors to cold and heat mediated by transient receptor potential cation channel subtypes in an ex vivo rat lung preparation. Respir Physiol Neurobiol (2011) 0.80
Isolated mitral regurgitation: quantitative assessment with 64-section multidetector CT--comparison with MR imaging and echocardiography. Radiology (2009) 0.80
Clinical and urodynamic evaluation of women referred with diabetes mellitus. Int Urogynecol J (2014) 0.80
Evaluation of crowded optic nerve head and small scleral canal in intrapapillary hemorrhage with adjacent peripapillary subretinal hemorrhage. Graefes Arch Clin Exp Ophthalmol (2013) 0.79
Apoptosis is induced in the haemolymph and fat body of Spodoptera exigua larvae upon oral inoculation with Spodoptera litura nucleopolyhedrovirus. J Gen Virol (2007) 0.79