Published in Nucleic Acids Res on November 26, 2013
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Long non-coding RNA regulation of reproduction and development. Mol Reprod Dev (2015) 0.82
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Regulation of androgen receptor splice variant AR3 by PCGEM1. Oncotarget (2016) 0.82
Long non-coding RNAs and their biological roles in plants. Genomics Proteomics Bioinformatics (2015) 0.82
Temperature expression patterns of genes and their coexpression with LncRNAs revealed by RNA-Seq in non-heading Chinese cabbage. BMC Genomics (2016) 0.82
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Genome-wide identification of long noncoding RNA genes and their potential association with fecundity and virulence in rice brown planthopper, Nilaparvata lugens. BMC Genomics (2015) 0.81
Genome-Wide Discovery of Long Non-Coding RNAs in Rainbow Trout. PLoS One (2016) 0.81
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Long noncoding RNAs expressed in human hepatic stellate cells form networks with extracellular matrix proteins. Genome Med (2016) 0.81
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Hepatic Long Intergenic Noncoding RNAs: High Promoter Conservation and Dynamic, Sex-Dependent Transcriptional Regulation by Growth Hormone. Mol Cell Biol (2015) 0.79
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Genome Wide Identification and Functional Prediction of Long Non-Coding RNAs Responsive to Sclerotinia sclerotiorum Infection in Brassica napus. PLoS One (2016) 0.78
Identification and characterization of long non-coding RNAs involved in osmotic and salt stress in Medicago truncatula using genome-wide high-throughput sequencing. BMC Plant Biol (2015) 0.78
YeATS - a tool suite for analyzing RNA-seq derived transcriptome identifies a highly transcribed putative extensin in heartwood/sapwood transition zone in black walnut. F1000Res (2015) 0.78
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LncRNA BCAR4 wires up signaling transduction in breast cancer. RNA Biol (2015) 0.77
A catalogue of novel bovine long noncoding RNA across 18 tissues. PLoS One (2015) 0.77
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A genetic algorithm-based weighted ensemble method for predicting transposon-derived piRNAs. BMC Bioinformatics (2016) 0.77
Long Non-Coding RNA Expression during Aging in the Human Subependymal Zone. Front Neurol (2015) 0.77
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Global analyses of endonucleolytic cleavage in mammals reveal expanded repertoires of cleavage-inducing small RNAs and their targets. Nucleic Acids Res (2016) 0.77
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MBRidge: an accurate and cost-effective method for profiling DNA methylome at single-base resolution. J Mol Cell Biol (2015) 0.76
Gene Expression Variations of Red-White Skin Coloration in Common Carp (Cyprinus carpio). Int J Mol Sci (2015) 0.76
De novo origin of VCY2 from autosome to Y-transposed amplicon. PLoS One (2015) 0.76
Long noncoding RNAs in prostate cancer: mechanisms and applications. Mol Cell Oncol (2014) 0.76
Identification and functional analysis of long non-coding RNAs in human and mouse early embryos based on single-cell transcriptome data. Oncotarget (2016) 0.76
Comparative Transcriptomic and Epigenomic Analyses Reveal New Regulators of Murine Brown Adipogenesis. PLoS Genet (2016) 0.76
Construction of a lncRNA-mediated feed-forward loop network reveals global topological features and prognostic motifs in human cancers. Oncotarget (2016) 0.76
Long Noncoding RNA CCAT2 as a Potential Novel Biomarker to Predict the Clinical Outcome of Cancer Patients: A Meta-Analysis. J Cancer (2017) 0.76
Identification and characterization of long intergenic noncoding RNAs in bovine mammary glands. BMC Genomics (2017) 0.75
Genome-Wide Identification and Characterization of Long Non-Coding RNAs from Mulberry (Morus notabilis) RNA-seq Data. Genes (Basel) (2016) 0.75
Genome-wide analysis of alternative splicing during human heart development. Sci Rep (2016) 0.75
DIGIT Is a Conserved Long Noncoding RNA that Regulates GSC Expression to Control Definitive Endoderm Differentiation of Embryonic Stem Cells. Cell Rep (2016) 0.75
Identification and functional analysis of long intergenic noncoding RNA genes in porcine pre-implantation embryonic development. Sci Rep (2016) 0.75
LincSNP 2.0: an updated database for linking disease-associated SNPs to human long non-coding RNAs and their TFBSs. Nucleic Acids Res (2016) 0.75
ANGIOGENES: knowledge database for protein-coding and noncoding RNA genes in endothelial cells. Sci Rep (2016) 0.75
Long intergenic non-coding RNA 271 is predictive of a poorer prognosis of papillary thyroid cancer. Sci Rep (2016) 0.75
Integrating RNA-seq and ChIP-seq data to characterize long non-coding RNAs in Drosophila melanogaster. BMC Genomics (2016) 0.75
BmncRNAdb: a comprehensive database of non-coding RNAs in the silkworm, Bombyx mori. BMC Bioinformatics (2016) 0.75
lncScore: alignment-free identification of long noncoding RNA from assembled novel transcripts. Sci Rep (2016) 0.75
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Differential gene and transcript expression analysis of RNA-seq experiments with TopHat and Cufflinks. Nat Protoc (2012) 35.75
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Functional demarcation of active and silent chromatin domains in human HOX loci by noncoding RNAs. Cell (2007) 30.22
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Rfam: Wikipedia, clans and the "decimal" release. Nucleic Acids Res (2010) 6.58
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NONCODE v3.0: integrative annotation of long noncoding RNAs. Nucleic Acids Res (2011) 2.82
Large-scale prediction of long non-coding RNA functions in a coding-non-coding gene co-expression network. Nucleic Acids Res (2011) 2.55
The Functional RNA Database 3.0: databases to support mining and annotation of functional RNAs. Nucleic Acids Res (2008) 2.10
DIANA-LncBase: experimentally verified and computationally predicted microRNA targets on long non-coding RNAs. Nucleic Acids Res (2012) 1.94
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Long non-coding RNAs function annotation: a global prediction method based on bi-colored networks. Nucleic Acids Res (2012) 1.46
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Non-coding RNA in fly dosage compensation. Trends Biochem Sci (2006) 1.23
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A draft sequence of the rice genome (Oryza sativa L. ssp. indica). Science (2002) 42.78
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From noncoding variant to phenotype via SORT1 at the 1p13 cholesterol locus. Nature (2010) 12.07
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CCL2 mediates cross-talk between cancer cells and stromal fibroblasts that regulates breast cancer stem cells. Cancer Res (2012) 2.50
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Autophagy negatively regulates Wnt signalling by promoting Dishevelled degradation. Nat Cell Biol (2010) 2.37