PubRank

E N Trifonov

Author PubWeight™ 94.35‹?›

Top papers

Rank Title Journal Year PubWeight™‹?›
1 Compilation and analysis of eukaryotic POL II promoter sequences. Nucleic Acids Res 1986 6.68
2 The pitch of chromatin DNA is reflected in its nucleotide sequence. Proc Natl Acad Sci U S A 1980 5.88
3 A computer algorithm for testing potential prokaryotic terminators. Nucleic Acids Res 1984 4.73
4 Curved DNA: design, synthesis, and circularization. Proc Natl Acad Sci U S A 1986 3.72
5 Curved DNA without A-A: experimental estimation of all 16 DNA wedge angles. Proc Natl Acad Sci U S A 1991 3.61
6 Nucleosome DNA sequence pattern revealed by multiple alignment of experimentally mapped sequences. J Mol Biol 1996 2.86
7 Estimation of wedge components in curved DNA. Nature 1987 2.82
8 Curved DNA. CRC Crit Rev Biochem 1985 2.78
9 Sequence-dependent deformational anisotropy of chromatin DNA. Nucleic Acids Res 1980 2.53
10 Terminators of transcription with RNA polymerase from Escherichia coli: what they look like and how to find them. J Biomol Struct Dyn 1986 2.53
11 The ten helical twist angles of B-DNA. Nucleic Acids Res 1982 2.02
12 CURVATURE: software for the analysis of curved DNA. Comput Appl Biosci 1993 1.64
13 Linguistics of nucleotide sequences: morphology and comparison of vocabularies. J Biomol Struct Dyn 1986 1.63
14 Possibility of nonkinked packing of DNA in chromatin. Proc Natl Acad Sci U S A 1978 1.58
15 Open and closed 5 S ribosomal RNA, the only two universal structures encoded in the nucleotide sequences. J Mol Biol 1983 1.58
16 Nucleotide sequence-directed mapping of the nucleosomes. Nucleic Acids Res 1983 1.47
17 10-11 bp periodicities in complete genomes reflect protein structure and DNA folding. Bioinformatics 1999 1.27
18 Applicability of the multiple alignment algorithm for detection of weak patterns: periodically distributed DNA pattern as a study case. Comput Appl Biosci 1996 1.27
19 Splice junctions follow a 205-base ladder. Proc Natl Acad Sci U S A 1991 1.25
20 Melting of DNA: its study and application as a research method. Biopolymers 1970 1.24
21 Sequence-dependent variations of B-DNA structure and protein-DNA recognition. Cold Spring Harb Symp Quant Biol 1983 1.23
22 Closed loops of nearly standard size: common basic element of protein structure. FEBS Lett 2000 1.23
23 The multiple codes of nucleotide sequences. Bull Math Biol 1989 1.20
24 Nucleosomal DNA sequence database. Nucleic Acids Res 1993 1.18
25 Sequence-dependent kinks induced in curved DNA. J Biomol Struct Dyn 1990 1.17
26 Mammalian retroposons integrate at kinkable DNA sites. J Biomol Struct Dyn 1998 1.17
27 Noninteger pitch and nuclease sensitivity of chromatin DNA. Biochemistry 1979 1.16
28 Periodical distribution of transcription factor sites in promoter regions and connection with chromatin structure. Proc Natl Acad Sci U S A 1999 1.16
29 Sequence periodicity in complete genomes of archaea suggests positive supercoiling. J Biomol Struct Dyn 1998 1.09
30 Non-clonability correlates with genomic instability: a case study of a unique DNA region. J Mol Biol 2001 1.07
31 Van der Waals locks: loop-n-lock structure of globular proteins. J Mol Biol 2001 1.06
32 CCAAT box revisited: bidirectionality, location and context. J Biomol Struct Dyn 1988 1.05
33 Protective nucleosome centering at splice sites as suggested by sequence-directed mapping of the nucleosomes. Gene 1997 1.04
34 Unusual frequencies of certain alternating purine-pyrimidine runs in natural DNA sequences: relation to Z-DNA. FEBS Lett 1985 1.04
35 Sequence structure of hidden 10.4-base repeat in the nucleosomes of C. elegans. J Biomol Struct Dyn 2008 1.03
36 Clustering of thymine dimers in ultraviolet irradiated DNA and the long-range transfer of electronic excitation along the molecule. Nat New Biol 1973 1.02
37 Linguistic measure of taxonomic and functional relatedness of nucleotide sequences. J Biomol Struct Dyn 1990 0.99
38 [Genetic level of DNA sequences is determined by superposition of many codes]. Mol Biol (Mosk) 1997 0.99
39 Nucleosome DNA bendability matrix (C. elegans). J Biomol Struct Dyn 2009 0.99
40 mRNA periodical infrastructure complementary to the proof-reading site in the ribosome. J Biomol Struct Dyn 1992 0.94
41 DNA bendability--a novel feature in E. coli promoter recognition. J Biomol Struct Dyn 1999 0.94
42 Protein folding: looping from hydrophobic nuclei. Proteins 2001 0.93
43 Nucleosome positioning pattern derived from oligonucleotide compositions of genomic sequences. J Biomol Struct Dyn 2011 0.92
44 Single-base resolution nucleosome mapping on DNA sequences. J Biomol Struct Dyn 2010 0.91
45 Epigenetic nucleosomes: Alu sequences and CG as nucleosome positioning element. J Biomol Struct Dyn 2008 0.91
46 Loop fold nature of globular proteins. Protein Eng 2001 0.91
47 Linguistic complexity of protein sequences as compared to texts of human languages. Biosystems 1996 0.90
48 Preferred positions of AA and TT dinucleotides in aligned nucleosomal DNA sequences. J Biomol Struct Dyn 1992 0.89
49 Intervening sequences exhibit distinct vocabulary. J Biomol Struct Dyn 1986 0.86
50 Nucleotide sequence-directed mapping of the nucleosomes of SV40 chromatin. Cell Biophys 1984 0.84
51 Columnar packing of telomeric nucleosomes. Biochem Biophys Res Commun 2001 0.84
52 Superhelicity of nucleosomal DNA changes its double-helical repeat. Cell Biophys 1983 0.83
53 Localization of curved DNA and its association with nucleosome phasing in the promoter region of the human estrogen receptor alpha gene. FEBS Lett 1999 0.81
54 Underlying order in protein sequence organization. Proc Natl Acad Sci U S A 1994 0.80
55 Periodic recurrence of methionines: fossil of gene fusion? Proc Natl Acad Sci U S A 1995 0.80
56 Protein sequence modules. J Biomol Struct Dyn 2005 0.79
57 Towards functional repertoire of the earliest proteins. J Biomol Struct Dyn 2012 0.79
58 Imported sequences in the mitochondrial yeast genome identified by nucleotide linguistics. Gene 1992 0.78
59 Enhancement of the nucleosomal pattern in sequences of lower complexity. Nucleic Acids Res 1997 0.78
60 Sequence-directed mapping of nucleosome positions. J Biomol Struct Dyn 2007 0.78
61 [Relation of polyphenylalanine synthesis in a cell-free system to the proportion of bivalent and monovalent cations]. Dokl Akad Nauk SSSR 1970 0.77
62 Characteristics of an "unclonable" DNA sequence located in the intergenic spacer between the pi- and alpha D-globin genes of the chicken. Dokl Biochem Biophys 2001 0.77
63 MS2 RNA has a potential to form an unusually large number of stable hairpins. J Theor Biol 1980 0.76
64 Simian virus 40 replication pause sites map with the nucleosomes. J Virol 1984 0.75
65 Detection of low-melting sites in the phage T2 DNA molecule. Mol Biol 1973 0.75
66 [Effect of ionizing electromagnetic radiation on DNA in solution and on white blood cells]. Dokl Akad Nauk SSSR 1975 0.75
67 [Evolutionary aspects of protein structure and folding]. Mol Biol (Mosk) 2001 0.75
68 [DNA structural damage in the tissues of gamma-irradiated animals]. Dokl Akad Nauk SSSR 1973 0.75
69 Sequence sizes of eukaryotic enzymes. Pac Symp Biocomput 1996 0.75
70 On Nussinov's compilation of eukaryotic transcription initiation sites. J Theor Biol 1987 0.75
71 Taxonomy of 5 S ribosomal RNA by the linguistic technique: probing with mitochondrial and mammalian sequences. J Mol Evol 1997 0.75
72 Protein structure and folding: a new start. J Biomol Struct Dyn 2001 0.75
73 Study of low-melting segments in T2 phage DNA by electron microscopy and the kinetic formaldehyde method. Mol Biol 1973 0.75
74 One common structural feature of "words" in protein sequences and human texts. J Biomol Struct Dyn 2013 0.75
75 [Study by the kinetic formaldehyde method of DNA following gamma-irradiation in vitro]. Dokl Akad Nauk SSSR 1972 0.75