Published in Front Plant Sci on April 19, 2016
Genome-Wide Investigation of Hsf Genes in Sesame Reveals Their Segmental Duplication Expansion and Their Active Role in Drought Stress Response. Front Plant Sci (2016) 0.90
Transcriptional Profiling and Identification of Heat-Responsive Genes in Perennial Ryegrass by RNA-Sequencing. Front Plant Sci (2017) 0.75
Cytoscape: a software environment for integrated models of biomolecular interaction networks. Genome Res (2003) 103.76
MEME SUITE: tools for motif discovery and searching. Nucleic Acids Res (2009) 23.27
WGCNA: an R package for weighted correlation network analysis. BMC Bioinformatics (2008) 18.58
Molecular chaperones in the cytosol: from nascent chain to folded protein. Science (2002) 15.09
Plant cis-acting regulatory DNA elements (PLACE) database: 1999. Nucleic Acids Res (1999) 13.02
The AtGenExpress global stress expression data set: protocols, evaluation and model data analysis of UV-B light, drought and cold stress responses. Plant J (2007) 8.09
Genome sequence and analysis of the tuber crop potato. Nature (2011) 7.77
Defining clusters from a hierarchical cluster tree: the Dynamic Tree Cut package for R. Bioinformatics (2007) 7.72
Heat shock transcription factors: structure and regulation. Annu Rev Cell Dev Biol (1995) 6.16
Extensive duplication and reshuffling in the Arabidopsis genome. Plant Cell (2000) 6.16
Activation and function of the MAPKs and their substrates, the MAPK-activated protein kinases. Microbiol Mol Biol Rev (2011) 5.02
Cells in stress: transcriptional activation of heat shock genes. Science (1993) 4.83
Heat shock factors: integrators of cell stress, development and lifespan. Nat Rev Mol Cell Biol (2010) 4.63
Isolation of the gene encoding the S. cerevisiae heat shock transcription factor. Cell (1988) 4.23
Mining EST databases to resolve evolutionary events in major crop species. Genome (2004) 3.82
Trimerization of a yeast transcriptional activator via a coiled-coil motif. Cell (1989) 3.80
Transcription factors in plant defense and stress responses. Curr Opin Plant Biol (2002) 3.72
Arabidopsis and the heat stress transcription factor world: how many heat stress transcription factors do we need? Cell Stress Chaperones (2001) 3.05
[GSDS: a gene structure display server]. Yi Chuan (2007) 3.02
PlnTFDB: an integrative plant transcription factor database. BMC Bioinformatics (2007) 3.01
Dual function of an Arabidopsis transcription factor DREB2A in water-stress-responsive and heat-stress-responsive gene expression. Proc Natl Acad Sci U S A (2006) 2.92
Complexity of the heat stress response in plants. Curr Opin Plant Biol (2007) 2.82
Arabidopsis heat shock transcription factor A2 as a key regulator in response to several types of environmental stress. Plant J (2006) 2.32
The arms race is ancient history in Arabidopsis, the wildflower. Nat Rev Genet (2001) 2.24
Heat stress response in plants: a complex game with chaperones and more than twenty heat stress transcription factors. J Biosci (2004) 2.22
The plant heat stress transcription factor (Hsf) family: structure, function and evolution. Biochim Biophys Acta (2011) 2.18
The cold-inducible CBF1 factor-dependent signaling pathway modulates the accumulation of the growth-repressing DELLA proteins via its effect on gibberellin metabolism. Plant Cell (2008) 2.16
Could heat shock transcription factors function as hydrogen peroxide sensors in plants? Ann Bot (2006) 2.15
Regulation of the heat-shock response. Plant Physiol (1998) 2.04
Plant molecular stress responses face climate change. Trends Plant Sci (2010) 2.04
The diversity of plant heat stress transcription factors. Trends Plant Sci (2007) 2.01
In the complex family of heat stress transcription factors, HsfA1 has a unique role as master regulator of thermotolerance in tomato. Genes Dev (2002) 1.97
Transcriptional profiling of Arabidopsis heat shock proteins and transcription factors reveals extensive overlap between heat and non-heat stress response pathways. BMC Genomics (2007) 1.95
How do plants feel the heat? Trends Biochem Sci (2012) 1.92
Gene family evolution and homology: genomics meets phylogenetics. Annu Rev Genomics Hum Genet (2000) 1.82
Small heat-shock proteins regulate membrane lipid polymorphism. Proc Natl Acad Sci U S A (2002) 1.79
Origins and evolution of the recA/RAD51 gene family: evidence for ancient gene duplication and endosymbiotic gene transfer. Proc Natl Acad Sci U S A (2006) 1.72
A novel group of transcriptional repressors in Arabidopsis. Plant Cell Physiol (2009) 1.65
A novel transcriptional cascade regulating expression of heat stress proteins during seed development of Arabidopsis. Plant Cell (2007) 1.59
The role of AHA motifs in the activator function of tomato heat stress transcription factors HsfA1 and HsfA2. Plant Cell (2000) 1.46
Two different heat shock transcription factors regulate immediate early expression of stress genes in Arabidopsis. Mol Genet Genomics (2003) 1.46
Tomato heat stress transcription factor HsfB1 represents a novel type of general transcription coactivator with a histone-like motif interacting with the plant CREB binding protein ortholog HAC1. Plant Cell (2004) 1.45
Arabidopsis HsfA1 transcription factors function as the main positive regulators in heat shock-responsive gene expression. Mol Genet Genomics (2011) 1.29
Genome-wide survey and expression profiling of heat shock proteins and heat shock factors revealed overlapped and stress specific response under abiotic stresses in rice. Plant Sci (2009) 1.27
Intracellular distribution and identification of the nuclear localization signals of two plant heat-stress transcription factors. Planta (1997) 1.23
Functional analysis of an Arabidopsis heat-shock transcription factor HsfA3 in the transcriptional cascade downstream of the DREB2A stress-regulatory system. Biochem Biophys Res Commun (2008) 1.20
Solution structure of the DNA-binding domain of the heat shock transcription factor determined by multidimensional heteronuclear magnetic resonance spectroscopy. Protein Sci (1994) 1.19
A global view of defense gene expression regulation--a highly interconnected signaling network. Curr Opin Plant Biol (2004) 1.16
Crosstalk between Hsp90 and Hsp70 chaperones and heat stress transcription factors in tomato. Plant Cell (2011) 1.14
Genome and transcriptome analysis of the grapevine (Vitis vinifera L.) WRKY gene family. Hortic Res (2014) 1.14
Genome-wide analysis of heat shock transcription factor families in rice and Arabidopsis. J Genet Genomics (2008) 1.13
Isolation and characterization of HsfA3, a new heat stress transcription factor of Lycopersicon peruvianum. Plant J (2000) 1.12
Genome-wide identification, classification and analysis of heat shock transcription factor family in maize. BMC Genomics (2011) 1.11
Plant class B HSFs inhibit transcription and exhibit affinity for TFIIB and TBP. Plant Mol Biol (2004) 1.09
Heat shock factors in rice (Oryza sativa L.): genome-wide expression analysis during reproductive development and abiotic stress. Mol Genet Genomics (2011) 1.08
Photoperiodic regulation of the C-repeat binding factor (CBF) cold acclimation pathway and freezing tolerance in Arabidopsis thaliana. Proc Natl Acad Sci U S A (2012) 1.07
A developmental transcriptional network for maize defines coexpression modules. Plant Physiol (2013) 0.97
Common and distinct functions of Arabidopsis class A1 and A2 heat shock factors in diverse abiotic stress responses and development. Plant Physiol (2013) 0.96
Arabidopsis DREB2C functions as a transcriptional activator of HsfA3 during the heat stress response. Biochem Biophys Res Commun (2010) 0.96
An inhibitory effect of the sequence-conserved upstream open-reading frame on the translation of the main open-reading frame of HsfB1 transcripts in Arabidopsis. Plant Cell Environ (2012) 0.95
Hsf and Hsp gene families in Populus: genome-wide identification, organization and correlated expression during development and in stress responses. BMC Genomics (2015) 0.93
The heat shock factor family from Triticum aestivum in response to heat and other major abiotic stresses and their role in regulation of heat shock protein genes. J Exp Bot (2013) 0.92
Genome-wide analysis of the heat shock transcription factors in Populus trichocarpa and Medicago truncatula. Mol Biol Rep (2011) 0.88
Genome-wide analysis, expression profile of heat shock factor gene family (CaHsfs) and characterisation of CaHsfA2 in pepper (Capsicum annuum L.). BMC Plant Biol (2015) 0.88
Network analysis for gene discovery in plant-specialized metabolism. Plant Cell Environ (2013) 0.88
Heat shock transcriptional factors in Malus domestica: identification, classification and expression analysis. BMC Genomics (2012) 0.88
Systematic differences in signal emitting and receiving revealed by PageRank analysis of a human protein interactome. PLoS One (2012) 0.85
Genome-wide analysis of the Hsf family in soybean and functional identification of GmHsf-34 involvement in drought and heat stresses. BMC Genomics (2014) 0.85
Identification and expression analysis of OsHsfs in rice. J Zhejiang Univ Sci B (2009) 0.85
Genome-wide analysis and molecular characterization of heat shock transcription factor family in Glycine max. J Genet Genomics (2012) 0.83
Comprehensive analysis of CCCH-type zinc finger family genes facilitates functional gene discovery and reflects recent allopolyploidization event in tetraploid switchgrass. BMC Genomics (2015) 0.82
Natural Attributes and Agricultural Implications of Somatic Genome Variation. Curr Issues Mol Biol (2015) 0.79
Identification of Top-ranked Proteins within a Directional Protein Interaction Network using the PageRank Algorithm: Applications in Humans and Plants. Curr Issues Mol Biol (2015) 0.75