Published in Nucleic Acids Res on December 11, 1994
The GAA triplet-repeat expansion in Friedreich ataxia interferes with transcription and may be associated with an unusual DNA structure. Am J Hum Genet (1998) 2.39
Relative stabilities of triple helices composed of combinations of DNA, RNA and 2'-O-methyl-RNA backbones: chimeric circular oligonucleotides as probes. Nucleic Acids Res (1995) 1.11
Length-dependent structure formation in Friedreich ataxia (GAA)n*(TTC)n repeats at neutral pH. Nucleic Acids Res (2004) 1.09
Formation of stable triplexes between purine RNA and pyrimidine oligodeoxyxylonucleotides. Nucleic Acids Res (2003) 0.93
Spectroscopic studies of chimeric DNA-RNA and RNA 29-base intramolecular triple helices. Nucleic Acids Res (1995) 0.90
Recognition of double-stranded RNA by guanidine-modified peptide nucleic acids. Biochemistry (2011) 0.90
Selection and characterization of RNAs that relieve transcriptional interference in Escherichia coli. Nucleic Acids Res (1998) 0.88
Recognition of duplex DNA by RNA polynucleotides. Nucleic Acids Res (1995) 0.85
Stabilities of intrastrand pyrimidine motif DNA and RNA triple helices. Nucleic Acids Res (2000) 0.85
Intracellular generation of single-stranded DNA for chromosomal triplex formation and induced recombination. Nucleic Acids Res (2001) 0.81
Triple helices containing arabinonucleotides in the third (Hoogsteen) strand: effects of inverted stereochemistry at the 2'-position of the sugar moiety. Nucleic Acids Res (1998) 0.81
Intrastrand triplex DNA repeats in bacteria: a source of genomic instability. Nucleic Acids Res (2015) 0.80
Selection of RNA aptamers that bind HIV-1 LTR DNA duplexes: strand invaders. Nucleic Acids Res (2010) 0.80
In vitro selection of oligonucleotides that bind double-stranded DNA in the presence of triplex-stabilizing agents. Nucleic Acids Res (2009) 0.77
The lncRNA HOTAIR impacts on mesenchymal stem cells via triple helix formation. Nucleic Acids Res (2016) 0.76
Triple helix-interacting proteins and cancer. OA Mol Oncol (2013) 0.76
MicroRNAs Form Triplexes with Double Stranded DNA at Sequence-Specific Binding Sites; a Eukaryotic Mechanism via which microRNAs Could Directly Alter Gene Expression. PLoS Comput Biol (2016) 0.76
Binding of oligonucleotides to a viral hairpin forming RNA triplexes with parallel G*G*C triplets. Nucleic Acids Res (2002) 0.75
Hairpin ribozyme-antisense RNA constructs can act as molecular Lassos. Nucleic Acids Res (2008) 0.75
PARTICLE triplexes cluster in the tumor suppressor WWOX and may extend throughout the human genome. Sci Rep (2017) 0.75
Modelling of the three-dimensional architecture of group I catalytic introns based on comparative sequence analysis. J Mol Biol (1990) 10.85
Sequence-specific cleavage of double helical DNA by triple helix formation. Science (1987) 9.20
Site-specific oligonucleotide binding represses transcription of the human c-myc gene in vitro. Science (1988) 5.97
Second structural motif for recognition of DNA by oligonucleotide-directed triple-helix formation. Science (1991) 5.40
A sodium-potassium switch in the formation of four-stranded G4-DNA. Nature (1990) 5.35
Stability and properties of double and triple helices: dramatic effects of RNA or DNA backbone composition. Science (1992) 3.53
Matrix-assisted laser desorption ionization time-of-flight mass spectrometry: a powerful tool for the mass and sequence analysis of natural and modified oligonucleotides. Nucleic Acids Res (1993) 2.82
Binding of triple helix forming oligonucleotides to sites in gene promoters. Biochemistry (1991) 2.73
Four-stranded nucleic acid structures 25 years later: from guanosine gels to telomer DNA. J Biomol Struct Dyn (1990) 2.62
Complexes formed by (pyrimidine)n . (purine)n DNAs on lowering the pH are three-stranded. Nucleic Acids Res (1979) 2.62
Kinetic analysis of oligodeoxyribonucleotide-directed triple-helix formation on DNA. Biochemistry (1990) 2.17
Sequence-specific recognition of double helical RNA and RNA.DNA by triple helix formation. Proc Natl Acad Sci U S A (1993) 2.07
Monovalent cation effects on intermolecular purine-purine-pyrimidine triple-helix formation. Nucleic Acids Res (1993) 2.04
The structures and functions of transfer RNA. Prog Biophys Mol Biol (1977) 1.92
Ribonucleoprotein and protein factors bind to an H-DNA-forming c-myc DNA element: possible regulators of the c-myc gene. Proc Natl Acad Sci U S A (1989) 1.85
Computer modeling from solution data of spinach chloroplast and of Xenopus laevis somatic and oocyte 5 S rRNAs. J Mol Biol (1989) 1.84
Stability of triple helices containing RNA and DNA strands: experimental and molecular modeling studies. Nucleic Acids Res (1993) 1.84
The anti-gene strategy: control of gene expression by triplex-forming-oligonucleotides. Anticancer Drug Des (1991) 1.81
DNA triple-helix formation: an approach to artificial gene repressors? Bioessays (1992) 1.50
An anti-parallel triple helix motif with oligodeoxynucleotides containing 2'-deoxyguanosine and 7-deaza-2'-deoxyxanthosine. Nucleic Acids Res (1993) 1.47
In vivo transcription of a progesterone-responsive gene is specifically inhibited by a triplex-forming oligonucleotide. Nucleic Acids Res (1993) 1.46
Evidence suggesting negative regulation of the erythropoietin gene by ribonucleoprotein. J Biol Chem (1990) 1.39
A molecular model for gene repression. Proc Natl Acad Sci U S A (1966) 1.29
Inhibition of T7 RNA polymerase initiation by triple-helical DNA complexes: a model for artificial gene repression. Biochemistry (1992) 1.17
Intramolecular dG.dG.dC triplex detected in Escherichia coli cells. J Mol Biol (1992) 1.09
Repression of bacteriophage promoters by DNA and RNA oligonucleotides. Nucleic Acids Res (1993) 1.07
Poly(rA) binds poly(rG).poly(rC) to form a triple helix. Nucleic Acids Res (1992) 0.88
DNA recognition by alternate strand triple helix formation: affinities of oligonucleotides for a site in the human p53 gene. Biochemistry (1994) 0.88
The triple helix: a potential mechanism for gene regulation. J Exp Pathol (1985) 0.84
DNA bending by asymmetric phosphate neutralization. Science (1994) 2.57
Selection and characterization of an RNA decoy for transcription factor NF-kappa B. Biochemistry (1999) 1.77
Electrostatic mechanisms of DNA deformation. Annu Rev Biophys Biomol Struct (2000) 1.53
Competitive triplex/quadruplex equilibria involving guanine-rich oligonucleotides. Biochemistry (1995) 1.31
In vivo recognition of an RNA aptamer by its transcription factor target. Biochemistry (2001) 1.20
Specific hybridization arrest of dihydrofolate reductase mRNA in vitro using anti-sense RNA or anti-sense oligonucleotides. Arch Biochem Biophys (1987) 1.13
DNA bending by hexamethylene-tethered ammonium ions. Proc Natl Acad Sci U S A (1996) 1.11
HMG proteins and DNA flexibility in transcription activation. Mol Cell Biol (2001) 1.10
Overcoming potassium-mediated triplex inhibition. Nucleic Acids Res (1995) 1.07
Repression of bacteriophage promoters by DNA and RNA oligonucleotides. Nucleic Acids Res (1993) 1.07
Effects of neutralization pattern and stereochemistry on DNA bending by methylphosphonate substitutions. Biochemistry (1997) 1.06
Improved quantitation of DNA curvature using ligation ladders. Nucleic Acids Res (1999) 1.05
Role of asymmetric phosphate neutralization in DNA bending by PU.1. J Biol Chem (1997) 1.00
DNA bending by a phantom protein. Chem Biol (1996) 0.96
Electrostatic effects in DNA bending by GCN4 mutants. Biochemistry (1998) 0.95
Effect of base composition on DNA bending by phosphate neutralization. Biophys Chem (1998) 0.95
The contribution of phosphate-phosphate repulsions to the free energy of DNA bending. Nucleic Acids Res (2005) 0.95
DNA bending by GCN4 mutants bearing cationic residues. Biochemistry (1997) 0.94
Selection of RNAs that bind to duplex DNA at neutral pH. J Mol Biol (1996) 0.91
Relief of triple-helix-mediated promoter inhibition by elongating RNA polymerases. Nucleic Acids Res (1993) 0.90
DNA recognition by alternate strand triple helix formation: affinities of oligonucleotides for a site in the human p53 gene. Biochemistry (1994) 0.88
Design and calibration of a semi-synthetic DNA phasing assay. Nucleic Acids Res (2000) 0.88
Combinatorial selection of a small RNA that induces amplification of IncFII plasmids in Escherichia coli. J Mol Biol (1998) 0.87
Searching genomes for sequences with the potential to form intrastrand triple helices. J Mol Biol (2000) 0.86
Experimental evaluation of the Liu-Beveridge dinucleotide step model of DNA structure. Nucleic Acids Res (2001) 0.86
Effects of phosphate neutralization on the shape of the AP-1 transcription factor binding site in duplex DNA. Nucleic Acids Res (1998) 0.85
Recognition of duplex DNA by RNA polynucleotides. Nucleic Acids Res (1995) 0.85
Stabilities of intrastrand pyrimidine motif DNA and RNA triple helices. Nucleic Acids Res (2000) 0.85
Preparation of oligonucleotide-biotin conjugates with cleavable linkers. Bioconjug Chem (1995) 0.85
Potential for H-DNA in the human MUC1 mucin gene promoter. J Biol Chem (1996) 0.84
Altered sensitivity to single-strand-specific reagents associated with the genomic vascular smooth muscle alpha-actin promoter during myofibroblast differentiation. J Biol Chem (2000) 0.84
Relating independent measures of DNA curvature: electrophoretic anomaly and cyclization efficiency. J Biomol Struct Dyn (2000) 0.84
A nuclear factor that binds purine-rich, single-stranded oligonucleotides derived from S1-sensitive elements upstream of the CFTR gene and the MUC1 gene. Nucleic Acids Res (1994) 0.83
DNA bending by asymmetrically tethered cations: influence of tether flexibility. Chem Biol (2001) 0.83
Teratocarcinoma transplantation antigens are encoded in the H-2 region. Immunogenetics (1983) 0.80
Overt expression of H-2 serotypes on EC cells is not necessary for host rejection. Immunogenetics (1984) 0.79
A potential H-DNA element in the MUC1 promoter does not influence transcription. J Biol Chem (1996) 0.78
Quantitating oligonucleotide affinities for duplex DNA: footprinting vs electrophoretic mobility shift assays. Anal Biochem (1997) 0.78
Enzymatic and chemical probing of an S1 nuclease-sensitive site upstream from the human CFTR gene. Gene (1994) 0.78
Binding of DNA oligonucleotides to sequences in the promoter of the human bc1-2 gene. Nucleic Acids Res (1996) 0.78
LMPCR for detection of oligonucleotide-directed triple helix formation: a cautionary note. Antisense Nucleic Acid Drug Dev (1999) 0.76
Characterization of a polypurine/polypyrimidine sequence upstream of the mouse metallothionein-I gene. Nucleic Acids Res (1998) 0.75
RNA-RNA noncovalent interactions investigated by microspray ionization mass spectrometry. Rapid Commun Mass Spectrom (2001) 0.75
Analysis of duplex DNA by triple helix formation: application to detection of a p53 microdeletion. Biotechniques (1994) 0.75
In vitro and in vivo ligation-mediated polymerase chain reaction analysis of a polypurine/polypyrimidine sequence upstream of the mouse metallothionein-I gene. J Biol Chem (2000) 0.75
RNA-RNA noncovalent interactions investigated by microspray ionization mass spectrometry. Rapid Commun Mass Spectrom (2001) 0.75