Published in J Bacteriol on August 01, 1995
Short-sequence DNA repeats in prokaryotic genomes. Microbiol Mol Biol Rev (1998) 8.47
Maintaining genome stability at the replication fork. Nat Rev Mol Cell Biol (2010) 5.88
Instability of repetitive DNA sequences: the role of replication in multiple mechanisms. Proc Natl Acad Sci U S A (2001) 2.38
Inverted Alu repeats unstable in yeast are excluded from the human genome. EMBO J (2000) 2.01
Factors affecting inverted repeat stimulation of recombination and deletion in Saccharomyces cerevisiae. Genetics (1998) 1.78
Unequal fidelity of leading strand and lagging strand DNA replication on the Escherichia coli chromosome. Proc Natl Acad Sci U S A (1998) 1.62
Stabilization of diverged tandem repeats by mismatch repair: evidence for deletion formation via a misaligned replication intermediate. Proc Natl Acad Sci U S A (1996) 1.44
Palindromes as substrates for multiple pathways of recombination in Escherichia coli. Genetics (2000) 1.38
Molecular instability in the COII-tRNA(Lys) intergenic region of the human mitochondrial genome: multiple origins of the 9-bp deletion and heteroplasmy for expanded repeats. Philos Trans R Soc Lond B Biol Sci (1998) 1.30
SOS mutator activity: unequal mutagenesis on leading and lagging strands. Proc Natl Acad Sci U S A (2000) 1.26
Long palindromic sequences induce double-strand breaks during meiosis in yeast. Mol Cell Biol (2000) 1.22
An origin of DNA replication in the promoter region of the human fragile X mental retardation (FMR1) gene. Mol Cell Biol (2006) 1.16
Cruciform extrusion propensity of human translocation-mediating palindromic AT-rich repeats. Nucleic Acids Res (2007) 1.04
Proofreading and secondary structure processing determine the orientation dependence of CAG x CTG trinucleotide repeat instability in Escherichia coli. Genetics (2007) 0.94
The breast cancer susceptibility gene BRCA2 is required for the maintenance of telomere homeostasis. J Biol Chem (2011) 0.88
Insights into mutagenesis using Escherichia coli chromosomal lacZ strains that enable detection of a wide spectrum of mutational events. Genetics (2011) 0.88
The roles of mutS, sbcCD and recA in the propagation of TGG repeats in Escherichia coli. Nucleic Acids Res (2000) 0.85
Phenotypic and genetic analysis of Lymantria dispar nucleopolyhedrovirus few polyhedra mutants: mutations in the 25K FP gene may be caused by DNA replication errors. J Virol (1997) 0.79
C1 inhibitor gene sequence facilitates frameshift mutations. Mol Med (1998) 0.76
Mutations of Bacteria from Virus Sensitivity to Virus Resistance. Genetics (1943) 165.64
Complete nucleotide sequence of the Escherichia coli plasmid pBR322. Cold Spring Harb Symp Quant Biol (1979) 43.48
Frameshift mutations and the genetic code. This paper is dedicated to Professor Theodosius Dobzhansky on the occasion of his 66th birthday. Cold Spring Harb Symp Quant Biol (1966) 14.57
Supercoiling of the DNA template during transcription. Proc Natl Acad Sci U S A (1987) 14.25
A constant rate of spontaneous mutation in DNA-based microbes. Proc Natl Acad Sci U S A (1991) 11.66
Induction of the Escherichia coli lactose operon selectively increases repair of its transcribed DNA strand. Nature (1989) 5.07
Replication of colicin E1 plasmid DNA in cell extracts. Origin and direction of replication. Proc Natl Acad Sci U S A (1974) 4.62
The plasmid cloning vector pBR325 contains a 482 base-pair-long inverted duplication. Gene (1981) 4.58
Unidirectional replication of plasmid ColE1 DNA. Nature (1974) 4.27
Replication of colicin E1 plasmid DNA in minicells from a unique replication initiation site. Proc Natl Acad Sci U S A (1974) 4.16
Transcription-coupled repair and human disease. Science (1994) 4.06
Specificity and mechanism of error-prone replication by human immunodeficiency virus-1 reverse transcriptase. J Biol Chem (1989) 3.80
Gene deletions causing human genetic disease: mechanisms of mutagenesis and the role of the local DNA sequence environment. Hum Genet (1991) 3.48
Structural intermediates of deletion mutagenesis: a role for palindromic DNA. Proc Natl Acad Sci U S A (1984) 3.17
Misalignment-mediated DNA synthesis errors. Biochemistry (1990) 3.04
Preferential DNA secondary structure mutagenesis in the lagging strand of replication in E. coli. Nature (1991) 2.83
Consequences of replication fork movement through transcription units in vivo. Science (1992) 2.70
The mutational spectrum of single base-pair substitutions causing human genetic disease: patterns and predictions. Hum Genet (1990) 2.59
DNA polymerase III holoenzyme of Escherichia coli. Annu Rev Biochem (1988) 2.52
Frameshift mutation: determinants of specificity. Annu Rev Genet (1990) 2.44
Model for the participation of quasi-palindromic DNA sequences in frameshift mutation. Proc Natl Acad Sci U S A (1982) 2.32
Efficient in vitro replication of double-stranded DNA templates by a purified T4 bacteriophage replication system. J Biol Chem (1980) 2.22
DNA replication fidelity. J Biol Chem (1992) 2.05
Error-prone polymerization by HIV-1 reverse transcriptase. Contribution of template-primer misalignment, miscoding, and termination probability to mutational hot spots. J Biol Chem (1993) 2.04
Transposon Tn5 excision in yeast: influence of DNA polymerases alpha, delta, and epsilon and repair genes. Proc Natl Acad Sci U S A (1992) 1.97
DNA structure, mutations, and human genetic disease. Curr Opin Biotechnol (1992) 1.83
DNA Polymerase III holoenzyme of Escherichia coli. IV. The holoenzyme is an asymmetric dimer with twin active sites. J Biol Chem (1988) 1.82
Greater susceptibility to mutations in lagging strand of DNA replication in Escherichia coli than in leading strand. Science (1993) 1.63
On the deletion of inverted repeated DNA in Escherichia coli: effects of length, thermal stability, and cruciform formation in vivo. Genetics (1991) 1.56
The influence of primary and secondary DNA structure in deletion and duplication between direct repeats in Escherichia coli. Genetics (1993) 1.45
Mechanisms of insertional mutagenesis in human genes causing genetic disease. Hum Genet (1991) 1.44
Z-DNA-forming sequences are spontaneous deletion hot spots. Proc Natl Acad Sci U S A (1989) 1.43
Direct evidence for the effect of transcription on local DNA supercoiling in vivo. J Mol Biol (1992) 1.40
Coordination of leading and lagging strand DNA synthesis at the replication fork of bacteriophage T7. Cell (1994) 1.34
The effect of the length of direct repeats and the presence of palindromes on deletion between directly repeated DNA sequences in bacteriophage T7. Nucleic Acids Res (1991) 1.29
The replication termination signal terB of the Escherichia coli chromosome is a deletion hot spot. EMBO J (1991) 1.28
DNA transcription and repressor binding affect deletion formation in Escherichia coli plasmids. EMBO J (1992) 1.28
Palindromy and the location of deletion endpoints in Escherichia coli. Genetics (1989) 1.26
Torsionally tuned cruciform and Z-DNA probes for measuring unrestrained supercoiling at specific sites in DNA of living cells. J Mol Biol (1991) 1.25
Exonucleolytic proofreading of leading and lagging strand DNA replication errors. Proc Natl Acad Sci U S A (1991) 1.14
Deletions in plasmid pBR322: replication slippage involving leading and lagging strands. Genetics (1991) 1.10
An in vitro approach to identifying specificity determinants of mutagenesis mediated by DNA misalignments. J Mol Biol (1991) 1.05
In vivo duplication of genetic elements by the formation of stem-loop DNA without an RNA intermediate. Proc Natl Acad Sci U S A (1992) 1.01
Coordinated leading- and lagging-strand synthesis at the Escherichia coli DNA replication fork. IV. Reconstitution of an asymmetric, dimeric DNA polymerase III holoenzyme. J Biol Chem (1992) 0.99
Effects of the bacteriophage T4 gene 41 and gene 32 proteins on RNA primer synthesis: coupling of leading- and lagging-strand DNA synthesis at a replication fork. Biochemistry (1990) 0.98
Cruciform DNA binding protein in HeLa cell extracts. Biochemistry (1994) 0.97
Frameshift fidelity during replication of double-stranded DNA in HeLa cell extracts. Biochemistry (1993) 0.88
Probing DNA structure with psoralen in vitro. Methods Enzymol (1992) 0.83
Torsional tension in the DNA double helix measured with trimethylpsoralen in living E. coli cells: analogous measurements in insect and human cells. Cell (1980) 4.42
Preferential DNA secondary structure mutagenesis in the lagging strand of replication in E. coli. Nature (1991) 2.83
Chromosomes in living Escherichia coli cells are segregated into domains of supercoiling. Proc Natl Acad Sci U S A (1981) 2.67
Removal of psoralen interstrand cross-links from DNA of Escherichia coli: mechanism and genetic control. J Mol Biol (1976) 2.40
Alternative structures in duplex DNA formed within the trinucleotide repeats of the myotonic dystrophy and fragile X loci. Biochemistry (1996) 2.11
Perfect palindromic lac operator DNA sequence exists as a stable cruciform structure in supercoiled DNA in vitro but not in vivo. Proc Natl Acad Sci U S A (1983) 2.01
Trinucleotide repeat DNA structures: dynamic mutations from dynamic DNA. Curr Opin Struct Biol (1998) 1.86
Human MSH2 binds to trinucleotide repeat DNA structures associated with neurodegenerative diseases. Hum Mol Genet (1997) 1.57
Structural analysis of slipped-strand DNA (S-DNA) formed in (CTG)n. (CAG)n repeats from the myotonic dystrophy locus. Nucleic Acids Res (1998) 1.55
Interruptions in the triplet repeats of SCA1 and FRAXA reduce the propensity and complexity of slipped strand DNA (S-DNA) formation. Biochemistry (1998) 1.46
The influence of primary and secondary DNA structure in deletion and duplication between direct repeats in Escherichia coli. Genetics (1993) 1.45
Herpes simplex virus types 1 and 2 induce shutoff of host protein synthesis by different mechanisms in Friend erythroleukemia cells. J Virol (1983) 1.45
Cruciform transitions in DNA. J Biol Chem (1984) 1.41
Mismatch repair in Escherichia coli enhances instability of (CTG)n triplet repeats from human hereditary diseases. Proc Natl Acad Sci U S A (1995) 1.40
Neurodegenerative diseases. Origins of instability. Nature (2001) 1.35
Repair of cross-linked DNA and survival of Escherichia coli treated with psoralen and light: effects of mutations influencing genetic recombination and DNA metabolism. J Bacteriol (1978) 1.33
Structure and dynamics of supercoil-stabilized DNA cruciforms. J Mol Biol (1998) 1.32
Torsionally tuned cruciform and Z-DNA probes for measuring unrestrained supercoiling at specific sites in DNA of living cells. J Mol Biol (1991) 1.25
Supercoiling in prokaryotic and eukaryotic DNA: changes in response to topological perturbation of plasmids in E. coli and SV40 in vitro, in nuclei and in CV-1 cells. Nucleic Acids Res (1987) 1.22
Stably maintained microdomain of localized unrestrained supercoiling at a Drosophila heat shock gene locus. EMBO J (1993) 1.20
Measurement of unrestrained negative supercoiling and topological domain size in living human cells. Biochemistry (1997) 1.18
A cruciform structural transition provides a molecular switch for chromosome structure and dynamics. J Mol Biol (2000) 1.16
Repair of cross-linked DNA in Escherichia coli. Basic Life Sci (1975) 1.15
CTG repeats associated with human genetic disease are inherently flexible. J Mol Biol (1998) 1.13
Effect of base composition at the center of inverted repeated DNA sequences on cruciform transitions in DNA. J Biol Chem (1988) 1.12
Transcriptional state of the mouse mammary tumor virus promoter can affect topological domain size in vivo. J Biol Chem (1999) 1.11
DNA sequence specificity of 4,5',8-trimethylpsoralen cross-linking. Effect of neighboring bases on cross-linking the 5'-TA dinucleotide. J Biol Chem (1988) 1.09
DNA polymerase III proofreading mutants enhance the expansion and deletion of triplet repeat sequences in Escherichia coli. J Biol Chem (2000) 1.09
Length-dependent structure formation in Friedreich ataxia (GAA)n*(TTC)n repeats at neutral pH. Nucleic Acids Res (2004) 1.09
Stability of triplet repeats of myotonic dystrophy and fragile X loci in human mutator mismatch repair cell lines. Hum Genet (1996) 1.09
Interstrand psoralen cross-links do not introduce appreciable bends in DNA. Biochemistry (1984) 1.08
Relationship between Escherichia coli growth and deletions of CTG.CAG triplet repeats in plasmids. J Mol Biol (1996) 1.06
Transcriptional properties of RNA polymerase II within triplet repeat-containing DNA from the human myotonic dystrophy and fragile X loci. J Biol Chem (1998) 1.05
Structure and dynamics of three-way DNA junctions: atomic force microscopy studies. Nucleic Acids Res (2000) 1.05
Unexpected formation of parallel duplex in GAA and TTC trinucleotide repeats of Friedreich's ataxia. J Mol Biol (2000) 1.02
The structure of intramolecular triplex DNA: atomic force microscopy study. J Mol Biol (2001) 1.02
Organization of herpes simplex virus type 1 deoxyribonucleic acid during replication probed in living cells with 4,5',8-trimethylpsoralen. Biochemistry (1982) 1.01
Anomalous rapid electrophoretic mobility of DNA containing triplet repeats associated with human disease genes. Biochemistry (1995) 1.01
Torsional tension in intracellular bacteriophage T4 DNA. Evidence that a linear DNA duplex can be supercoiled in vivo. J Mol Biol (1982) 1.00
Involvement of the nucleotide excision repair protein UvrA in instability of CAG*CTG repeat sequences in Escherichia coli. J Biol Chem (2001) 0.99
DNA supercoiling and eukaryotic gene expression. Oxf Surv Eukaryot Genes (1988) 0.96
Reduced 4,5',8-trimethylpsoralen cross-linking of left-handed Z-DNA stabilized by DNA supercoiling. Biochemistry (1987) 0.94
Structure of branched DNA molecules: gel retardation and atomic force microscopy studies. J Mol Biol (1999) 0.94
DNA structural transitions within the PKD1 gene. Nucleic Acids Res (1999) 0.94
Specialized chromatin structure domain boundary elements flanking a Drosophila heat shock gene locus are under torsional strain in vivo. Biochemistry (1995) 0.94
Topography and kinetics of genetic recombination in Escherichia coli treated with psoralen and light. Proc Natl Acad Sci U S A (1978) 0.92
Single-stranded DNA-binding protein enhances the stability of CTG triplet repeats in Escherichia coli. J Bacteriol (1996) 0.90
Rigidity of a B-Z region incorporated into a plasmid as monitored by electron paramagnetic resonance. Arch Biochem Biophys (1995) 0.89
Hyperreactivity of B-Z junctions to 4,5',8-trimethylpsoralen photobinding assayed by an exonuclease III/photoreversal mapping procedure. J Mol Biol (1989) 0.88
Stabilization of triple-helical nucleic acids by basic oligopeptides. Biochemistry (1995) 0.87
Stabilization of intramolecular triple/single-strand structure by cationic peptides. Biochemistry (1998) 0.86
Stability of an inverted repeat in a human fibrosarcoma cell. Nucleic Acids Res (1996) 0.84
Analysis of trimethylpsoralen photoreactivity to Z-DNA provides a general in vivo assay for Z-DNA: analysis of the hypersensitivity of (GT)n B-Z junctions. Biotechniques (1988) 0.84
Leading strand specific spontaneous mutation corrects a quasipalindrome by an intermolecular strand switch mechanism. J Mol Biol (1997) 0.84
Environmental influences on the in vivo level of intramolecular triplex DNA in Escherichia coli. Biochemistry (1993) 0.83
Probing DNA structure with psoralen in vitro. Methods Enzymol (1992) 0.83
Formation of a combined H-DNA/open TATA box structure in the promoter sequence of the human Na,K-ATPase alpha2 gene. J Biol Chem (1996) 0.83
Measurement of localized DNA supercoiling and topological domain size in eukaryotic cells. Methods Enzymol (1999) 0.80
Primer-template misalignments during leading strand DNA synthesis account for the most frequent spontaneous mutations in a quasipalindromic region in Escherichia coli. J Mol Biol (1998) 0.80
Estimation of superhelical density in vivo from analysis of the level of cruciforms existing in living cells. J Mol Biol (1991) 0.80
Template end-to-end transposition by RNA polymerase II. J Biol Chem (1998) 0.79
New procedure using a psoralen derivative for analysis of nucleosome associated DNA sequences in chromatin of living cells. Nucleic Acids Res (1982) 0.79
Amplified primer extension assay for psoralen photoproducts provides a sensitive assay for a (CG)6TA(CG)2(TG)8 Z-DNA torsionally tuned probe: preferential psoralen photobinding to one strand of a B-Z junction. Biochemistry (1993) 0.78