Independent evolutionary origin of histone H3.3-like variants of animals and Tetrahymena.

PubWeight™: 1.15‹?› | Rank: Top 10%

🔗 View Article (PMC 307769)

Published in Nucleic Acids Res on January 25, 1994

Authors

T H Thatcher1, J MacGaffey, J Bowen, S Horowitz, D L Shapiro, M A Gorovsky

Author Affiliations

1: Department of Biology, University of Rochester, NY 14627.

Articles citing this

Transcriptional activation triggers deposition and removal of the histone variant H3.3. Genes Dev (2005) 3.57

Chromatin assembly at kinetochores is uncoupled from DNA replication. J Cell Biol (2000) 2.72

Microarray analyses of gene expression during the Tetrahymena thermophila life cycle. PLoS One (2009) 2.11

A unified phylogeny-based nomenclature for histone variants. Epigenetics Chromatin (2012) 1.82

Transcription through chromatin by RNA polymerase II: histone displacement and exchange. Mutat Res (2007) 1.38

Differentiation of Fusarium subglutinans f. sp. pini by histone gene sequence data. Appl Environ Microbiol (1999) 1.26

Deposition and function of histone H3 variants in Tetrahymena thermophila. Mol Cell Biol (2006) 1.22

Constitutive expression, not a particular primary sequence, is the important feature of the H3 replacement variant hv2 in Tetrahymena thermophila. Mol Cell Biol (1997) 1.08

The evolutionary history of histone H3 suggests a deep eukaryotic root of chromatin modifying mechanisms. BMC Evol Biol (2010) 0.94

An unusual histone H3 specific for early macronuclear development in Euplotes crassus. Proc Natl Acad Sci U S A (1997) 0.87

Cloning and characterization of the major histone H2A genes completes the cloning and sequencing of known histone genes of Tetrahymena thermophila. Nucleic Acids Res (1996) 0.86

Identification of a replication-independent replacement histone H3 in the basidiomycete Ustilago maydis. J Biol Chem (2011) 0.76

A new family of "H3L-like" histone genes. J Mol Evol (2004) 0.75

Articles cited by this

DNA sequencing with chain-terminating inhibitors. Proc Natl Acad Sci U S A (1977) 790.54

The neighbor-joining method: a new method for reconstructing phylogenetic trees. Mol Biol Evol (1987) 266.90

A technique for radiolabeling DNA restriction endonuclease fragments to high specific activity. Anal Biochem (1983) 206.01

A comprehensive set of sequence analysis programs for the VAX. Nucleic Acids Res (1984) 181.98

Screening lambdagt recombinant clones by hybridization to single plaques in situ. Science (1977) 83.82

Progressive sequence alignment as a prerequisite to correct phylogenetic trees. J Mol Evol (1987) 41.41

Base composition-independent hybridization in tetramethylammonium chloride: a method for oligonucleotide screening of highly complex gene libraries. Proc Natl Acad Sci U S A (1985) 13.19

The organization and expression of histone gene families. Cell (1981) 6.66

The genes coding for histone H3 and H4 in Neurospora crassa are unique and contain intervening sequences. Nucleic Acids Res (1983) 2.93

An unusual genetic code in nuclear genes of Tetrahymena. Proc Natl Acad Sci U S A (1985) 2.61

Histone variants specific to the transcriptionally active, amitotically dividing macronucleus of the unicellular eucaryote, Tetrahymena thermophila. Cell (1980) 2.52

Mapping the 5' and 3' ends of Tetrahymena thermophila mRNAs using RNA ligase mediated amplification of cDNA ends (RLM-RACE). Nucleic Acids Res (1993) 2.48

Efficient mass transformation of Tetrahymena thermophila by electroporation of conjugants. Proc Natl Acad Sci U S A (1992) 2.33

Replacement variant histone genes contain intervening sequences. Mol Cell Biol (1985) 2.27

Cell-cycle regulation of histone gene expression. Cell (1986) 2.09

A comprehensive compilation and alignment of histones and histone genes. Nucleic Acids Res (1989) 1.91

An intervening sequence in an unusual histone H1 gene of Tetrahymena thermophila. Proc Natl Acad Sci U S A (1986) 1.79

Multilevel regulation of replication-dependent histone genes. Trends Genet (1988) 1.79

Yeast H3 and H4 histone messenger RNAs are transcribed from two non-allelic gene sets. J Mol Biol (1983) 1.72

Sequence and properties of the message encoding Tetrahymena hv1, a highly evolutionarily conserved histone H2A variant that is associated with active genes. Nucleic Acids Res (1988) 1.65

Histones and chromatin structure in Tetrahymena macro- and micronuclei. Cold Spring Harb Symp Quant Biol (1978) 1.62

Multiple, independently regulated, polyadenylated messages for histone H3 and H4 in Tetrahymena. Nucleic Acids Res (1983) 1.62

Unusual structure, evolutionary conservation of non-coding sequences and numerous pseudogenes characterize the human H3.3 histone multigene family. Nucleic Acids Res (1987) 1.52

Transformation of Tetrahymena thermophila by microinjection of a foreign gene. Proc Natl Acad Sci U S A (1993) 1.48

Unusual features of transcribed and translated regions of the histone H4 gene family of Tetrahymena thermophila. Nucleic Acids Res (1987) 1.46

Comparison of the structure and cell cycle expression of mRNAs encoded by two histone H3-H4 loci in Saccharomyces cerevisiae. Mol Cell Biol (1988) 1.38

Codon usage in Tetrahymena and other ciliates. J Protozool (1989) 1.38

Sequence, organization and expression of the core histone genes of Aspergillus nidulans. Mol Gen Genet (1990) 1.31

Tetrahymena histone H3. Purification and two variant sequences. J Biochem (1984) 1.24

Conservation of intron position indicates separation of major and variant H2As is an early event in the evolution of eukaryotes. J Mol Evol (1990) 1.11

Regulation of protein synthesis in Tetrahymena. RNA sequence sets of growing and starved cells. J Biol Chem (1983) 1.10

Characterization of two types of histone H2B genes from macronuclei of Tetrahymena thermophila. Nucleic Acids Res (1987) 1.04

DNase I sensitivity of ribosomal genes in isolated nucleosome core particles. Nucleic Acids Res (1980) 1.02

Histone and histone gene compilation and alignment update. Nucleic Acids Res (1991) 1.01

Histone synthesis and turnover in alfalfa. Fast loss of highly acetylated replacement histone variant H3.2. J Biol Chem (1993) 0.97

Multiplicity of histone h3 variants in wheat, barley, rice, and maize. Plant Physiol (1991) 0.96

A Drosophila melanogaster H3.3 cDNA encodes a histone variant identical with the vertebrate H3.3. Gene (1991) 0.95

Codon usage in histone gene families of higher eukaryotes reflects functional rather than phylogenetic relationships. J Mol Evol (1986) 0.95

Genes encoding a histone H3.3-like variant in Arabidopsis contain intervening sequences. J Mol Biol (1992) 0.90

Chicken histone H3.3B cDNA sequence confirms unusual 3' UTR structure. Nucleic Acids Res (1987) 0.88

Histone variant patterns during vertebrate embryogenesis and limb development. Cell Differ Dev (1990) 0.87

Post-transcriptional control of H3 histone variants synthesis. Biochem Int (1992) 0.86

Articles by these authors

Isolation of micro- and macronuclei of Tetrahymena pyriformis. Methods Cell Biol (1975) 6.06

Simple method for quantitive densitometry of polyacrylamide gels using fast green. Anal Biochem (1970) 6.03

Phosphorylation of histone H3 is required for proper chromosome condensation and segregation. Cell (1999) 4.83

Comparison of the sequences of macro- and micronuclear DNA of Tetrahymena pyriformis. Chromosoma (1974) 3.29

Germline and somatic transformation of mating Tetrahymena thermophila by particle bombardment. Genetics (1997) 3.04

Heat shock, deciliation and release from anoxia induce the synthesis of the same set of polypeptides in starved T. pyriformis. Cell (1980) 3.04

Genome organization and reorganization in Tetrahymena. Annu Rev Genet (1980) 2.98

Cloning and nucleotide sequencing of the bovine growth hormone gene. Nucleic Acids Res (1982) 2.91

Clinico-neuropathological correlation of Alzheimer's disease in a community-based case series. J Am Geriatr Soc (1999) 2.63

An unusual genetic code in nuclear genes of Tetrahymena. Proc Natl Acad Sci U S A (1985) 2.61

Phosphorylation of histone H3 at serine 10 is correlated with chromosome condensation during mitosis and meiosis in Tetrahymena. Proc Natl Acad Sci U S A (1998) 2.60

Histone variants specific to the transcriptionally active, amitotically dividing macronucleus of the unicellular eucaryote, Tetrahymena thermophila. Cell (1980) 2.52

Mapping the 5' and 3' ends of Tetrahymena thermophila mRNAs using RNA ligase mediated amplification of cDNA ends (RLM-RACE). Nucleic Acids Res (1993) 2.48

Alveolar type 1 cells express the alpha2 Na,K-ATPase, which contributes to lung liquid clearance. Circ Res (2003) 2.43

Linker histone H1 regulates specific gene expression but not global transcription in vivo. Cell (1996) 2.39

In situ dot blots: quantitation of mRNA in intact cells. Nucleic Acids Res (1986) 2.37

Macro- and micronuclei of Tetrahymena pyriformis: a model system for studying the structure and function of eukaryotic nuclei. J Protozool (1973) 2.36

Efficient mass transformation of Tetrahymena thermophila by electroporation of conjugants. Proc Natl Acad Sci U S A (1992) 2.33

High frequency vector-mediated transformation and gene replacement in Tetrahymena. Nucleic Acids Res (1994) 2.31

Lack of clinical significance of early ischemic changes on computed tomography in acute stroke. JAMA (2001) 2.24

Cytochemical studies on the problem of macronuclear subnuclei in tetrahymena. Genetics (1972) 2.21

Tetrahymena H4 genes: structure, evolution and organization in macro- and micronuclei. Nucleic Acids Res (1984) 2.21

Isolation of albumin from whole human plasma and fractionation of albumin-depleted plasma. Biochem J (1976) 2.15

Mapping of N6-methyladenosine residues in bovine prolactin mRNA. Proc Natl Acad Sci U S A (1984) 2.08

The Marfan syndrome: abnormal aortic elastic properties. J Am Coll Cardiol (1991) 2.06

Nucleotide sequence of bovine prolactin messenger RNA. Evidence for sequence polymorphism. J Biol Chem (1982) 2.05

Induction of suppressor T cells in systemic lupus erythematosus by thymosin and cultured thymic epithelium. Science (1977) 2.04

A small number of cistrons for ribosomal RNA in the germinal nucleus of a eukaryote, Tetrahymena pyriformis. Proc Natl Acad Sci U S A (1974) 2.02

Linker histones are not essential and affect chromatin condensation in vivo. Cell (1995) 1.99

Developmental rearrangements associated with a single type of expressed alpha-tubulin gene in Tetrahymena. Cell (1984) 1.98

Withdrawal: a review of the literature and an agenda for research. Stud Fam Plann (1995) 1.96

Oxygen toxicity in mouse lung: pathways to cell death. Am J Respir Cell Mol Biol (1998) 1.94

( 6 N)methyl adenine in the nuclear DNA of a eucaryote, Tetrahymena pyriformis. J Cell Biol (1973) 1.93

Temporal and spatial association of histone H2A variant hv1 with transcriptionally competent chromatin during nuclear development in Tetrahymena thermophila. Genes Dev (1993) 1.87

The role of the limbic system in experiential phenomena of temporal lobe epilepsy. Ann Neurol (1982) 1.85

Histone H2A.Z acetylation modulates an essential charge patch. Mol Cell (2001) 1.81

An intervening sequence in an unusual histone H1 gene of Tetrahymena thermophila. Proc Natl Acad Sci U S A (1986) 1.79

Phylogenetic analysis of the core histones H2A, H2B, H3, and H4. Nucleic Acids Res (1994) 1.79

Acetylation of lysine 40 in alpha-tubulin is not essential in Tetrahymena thermophila. J Cell Biol (1995) 1.79

Electroporation-mediated replacement of a positively and negatively selectable beta-tubulin gene in Tetrahymena thermophila. Proc Natl Acad Sci U S A (1994) 1.79

Multiple pathogens in adult patients admitted with community-acquired pneumonia: a one year prospective study of 346 consecutive patients. Thorax (1996) 1.78

Histone H2A.Z has a conserved function that is distinct from that of the major H2A sequence variants. Nucleic Acids Res (2000) 1.70

Micronuclei of Tetrahymena contain two types of histone H3. Proc Natl Acad Sci U S A (1979) 1.68

A simplified formaldehyde fixation and immunoprecipitation technique for studying protein-DNA interactions. Anal Biochem (1991) 1.67

Regulation of histone acetylation in Tetrahymena macro- and micronuclei. J Biol Chem (1982) 1.67

Sequence and properties of the message encoding Tetrahymena hv1, a highly evolutionarily conserved histone H2A variant that is associated with active genes. Nucleic Acids Res (1988) 1.65

Histones and chromatin structure in Tetrahymena macro- and micronuclei. Cold Spring Harb Symp Quant Biol (1978) 1.62

Multiple, independently regulated, polyadenylated messages for histone H3 and H4 in Tetrahymena. Nucleic Acids Res (1983) 1.62

Proteolytic processing of histone H3 in chromatin: a physiologically regulated event in Tetrahymena micronuclei. Cell (1980) 1.62

Na,K-ATPase in the cochlear lateral wall of human temporal bones with endolymphatic hydrops. Ann Otol Rhinol Laryngol (1995) 1.61

Selective T cell killing of human lymphocytes by ultraviolet radiation. Cell Immunol (1974) 1.59

Transradial coronary stenting: comparison with femoral access closed with an arterial suture device. Catheter Cardiovasc Interv (2000) 1.57

Formaldehyde cross-linking and immunoprecipitation demonstrate developmental changes in H1 association with transcriptionally active genes. Mol Cell Biol (1991) 1.57

Conserved mechanism of tRNA splicing in eukaryotes. Mol Cell Biol (1991) 1.53

Perspectives on tubulin isotype function and evolution based on the observation that Tetrahymena thermophila microtubules contain a single alpha- and beta-tubulin. Cell Motil Cytoskeleton (1993) 1.53

Morphological and biochemical alterations in foetal rat brain cells cultured in the presence of monobutyryl cyclic AMP. Nature (1973) 1.53

Validity and responsiveness of the Minimum Data Set. J Am Geriatr Soc (1999) 1.53

hv1 is an evolutionarily conserved H2A variant that is preferentially associated with active genes. J Biol Chem (1986) 1.51

Pharmacy access to syringes among injecting drug users: follow-up findings from Hartford, Connecticut. Public Health Rep (1998) 1.51

Fiberoptic bronchoscopy in the treatment of intubated neonates. Am J Dis Child (1989) 1.50

Stenting in acute coronary syndromes: a comparison of radial versus femoral access sites. J Am Coll Cardiol (1998) 1.49

The mitral valve orifice method for noninvasive two-dimensional echo Doppler determinations of cardiac output. Circulation (1983) 1.48

The Mini-Mental State Examination score and the clinical diagnosis of dementia. J Clin Epidemiol (1994) 1.47

Unusual features of transcribed and translated regions of the histone H4 gene family of Tetrahymena thermophila. Nucleic Acids Res (1987) 1.46

Contrast letter acuity as a visual component for the Multiple Sclerosis Functional Composite. Neurology (2003) 1.46

Human kidney proximal tubules are the main source of plasma glutathione peroxidase. Am J Physiol (1994) 1.43

Polyglycylation of tubulin is essential and affects cell motility and division in Tetrahymena thermophila. J Cell Biol (2000) 1.43

Phosphorylation of linker histone H1 regulates gene expression in vivo by mimicking H1 removal. Mol Cell (1999) 1.42

Intensity-modulated radiotherapy in the treatment of breast cancer. Clin Oncol (R Coll Radiol) (2012) 1.42

Germ-line knockout heterokaryons of an essential alpha-tubulin gene enable high-frequency gene replacement and a test of gene transfer from somatic to germ-line nuclei in Tetrahymena thermophila. Proc Natl Acad Sci U S A (1997) 1.40

Knockout heterokaryons enable facile mutagenic analysis of essential genes in Tetrahymena. Methods Cell Biol (2000) 1.40

Subunit structure of rDNA-containing chromatin. Biochemistry (1976) 1.40

Preliminary report on the comparative use of lyophilized homograft and xenograft in the closure of raw areas. Br J Surg (1974) 1.39

Studies on histone fraction F2A1 in macro- and micronuclei of Tetrahymena pyriformis. J Cell Biol (1973) 1.39

Neuroimaging for non-accidental head injury in childhood: a proposed protocol. Clin Radiol (2003) 1.39

Hydrophobic surfactant-associated protein in whole lung surfactant and its importance for biophysical activity in lung surfactant extracts used for replacement therapy. Pediatr Res (1986) 1.37

Regulation of protein synthesis in Tetrahymena: isolation and characterization of polysomes by gel filtration and precipitation at pH 5.3. Nucleic Acids Res (1982) 1.37

Excision of micronuclear-specific DNA requires parental expression of pdd2p and occurs independently from DNA replication in Tetrahymena thermophila. Genes Dev (1999) 1.36

Reconstitution of B and T lymphocyte function in severe combined immunodeficiency disease after transplantation with thymic epithelium. Lancet (1976) 1.35

Double-blind clinical trial of calf lung surfactant extract for the prevention of hyaline membrane disease in extremely premature infants. Pediatrics (1985) 1.35

Drosophila has a single copy of the gene encoding a highly conserved histone H2A variant of the H2A.F/Z type. Nucleic Acids Res (1988) 1.34

Injuries to restrained occupants in far-side crashes. Annu Proc Assoc Adv Automot Med (2000) 1.33

Analysis of ventricular shape by echocardiography in normal fetuses, newborns, and infants. Circulation (1983) 1.32

Phosphorylation of linker histone H1 regulates gene expression in vivo by creating a charge patch. Mol Cell (2000) 1.32

Hyperoxia-induced cell death in the lung--the correlation of apoptosis, necrosis, and inflammation. Ann N Y Acad Sci (1999) 1.31

The effect of variations of pulsed Doppler sampling site on calculation of cardiac output: an experimental study in open-chest dogs. Circulation (1983) 1.28

Heat shock and deciliation induce phosphorylation of histone H1 in T. pyriformis. Cell (1981) 1.27

Cilia regeneration in starved tetrahymena: an inducible system for studying gene expression and organelle biogenesis. Cell (1979) 1.27

Cellular oxygen toxicity. Oxidant injury without apoptosis. J Biol Chem (1996) 1.26

Prediction of persistent immunodeficiency in the DiGeorge anomaly. J Pediatr (1989) 1.26

Effects of intracoronary streptokinase and intracoronary nitroglycerin infusion on coronary angiographic patterns and mortality in patients with acute myocardial infarction. N Engl J Med (1984) 1.25

Transcriptional regulation of gene expression in Tetrahymena thermophila. Nucleic Acids Res (1990) 1.25