Epigenetic instability in ES cells and cloned mice.

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Published in Science on July 06, 2001

Authors

D Humpherys1, K Eggan, H Akutsu, K Hochedlinger, W M Rideout , D Biniszkiewicz, R Yanagimachi, R Jaenisch

Author Affiliations

1: Whitehead Institute for Biomedical Research, Department of Biology, Massachusetts Institute of Technology, 9 Cambridge Center, Cambridge MA 02142, USA.

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Targeted mutation of the DNA methyltransferase gene results in embryonic lethality. Cell (1992) 27.80

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Deficiency of methyl-CpG binding protein-2 in CNS neurons results in a Rett-like phenotype in mice. Nat Genet (2001) 8.64

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MHC class I deficiency: susceptibility to natural killer (NK) cells and impaired NK activity. Science (1991) 3.93

Targeted mutation of the gene encoding the low affinity NGF receptor p75 leads to deficits in the peripheral sensory nervous system. Cell (1992) 3.91

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Intracytoplasmic sperm injection in the mouse. Biol Reprod (1995) 3.53

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Retrovirus integration and chromatin structure: Moloney murine leukemia proviral integration sites map near DNase I-hypersensitive sites. J Virol (1987) 3.45

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Rejection of class I MHC-deficient haemopoietic cells by irradiated MHC-matched mice. Nature (1991) 3.36

Delayed clearance of Sendai virus in mice lacking class I MHC-restricted CD8+ T cells. J Immunol (1992) 3.31

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A generic intron increases gene expression in transgenic mice. Mol Cell Biol (1991) 2.75

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Infectivity and methylation of retroviral genomes is correlated with expression in the animal. Cell (1981) 2.73

Functional analysis of activins during mammalian development. Nature (1995) 2.71

Lack of neurotrophin-3 leads to deficiencies in the peripheral nervous system and loss of limb proprioceptive afferents. Cell (1994) 2.65

Infection of preimplantation mouse embryos and of newborn mice with leukemia virus: tissue distribution of viral DNA and RNA and leukemogenesis in the adult animal. Proc Natl Acad Sci U S A (1975) 2.64

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Perinatal lethal osteogenesis imperfecta in transgenic mice bearing an engineered mutant pro-alpha 1(I) collagen gene. Nature (1988) 2.49

alpha3beta1 Integrin is required for normal development of the epidermal basement membrane. J Cell Biol (1997) 2.46

Type III collagen is crucial for collagen I fibrillogenesis and for normal cardiovascular development. Proc Natl Acad Sci U S A (1997) 2.37

Is calcium ionophore a universal activator for unfertilised eggs? Nature (1974) 2.36

Generation of mice from wild-type and targeted ES cells by nuclear cloning. Nat Genet (2000) 2.36

The recombination activating gene-1 (RAG-1) transcript is present in the murine central nervous system. Cell (1991) 2.33

Germline integration of moloney murine leukemia virus at the Mov13 locus leads to recessive lethal mutation and early embryonic death. Cell (1983) 2.33

Insertion of retrovirus into the first intron of alpha 1(I) collagen gene to embryonic lethal mutation in mice. Proc Natl Acad Sci U S A (1984) 2.30

A targeted mutation at the known collagenase cleavage site in mouse type I collagen impairs tissue remodeling. J Cell Biol (1995) 2.30

Mammalian transgenesis by intracytoplasmic sperm injection. Science (1999) 2.28

Complementary roles of BDNF and NT-3 in vestibular and auditory development. Neuron (1995) 2.27

Retroviruses as probes for mammalian development: allocation of cells to the somatic and germ cell lineages. Cell (1986) 2.26

Retrovirus-induced de novo methylation of flanking host sequences correlates with gene inactivity. Nature (1985) 2.26

Simian virus 40 DNA sequences in DNA of healthy adult mice derived from preimplantation blastocysts injected with viral DNA. Proc Natl Acad Sci U S A (1974) 2.26

Activation and transposition of endogenous retroviral elements in hypomethylation induced tumors in mice. Oncogene (2007) 2.22

Mice lacking major histocompatibility complex class I and class II molecules. Proc Natl Acad Sci U S A (1993) 2.18

Integration of Moloney leukaemia virus into the germ line of mice: correlation between site of integration and virus activation. Nature (1980) 2.18

Beta 2-microglobulin-deficient NOD mice do not develop insulitis or diabetes. Diabetes (1994) 2.16

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Association of the Bloom syndrome protein with topoisomerase IIIalpha in somatic and meiotic cells. Cancer Res (2000) 2.13

RNA and the epigenetic regulation of X chromosome inactivation. Cell (1998) 2.10

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