Published in Neural Comput on June 01, 2002
Automated three-dimensional detection and shape classification of dendritic spines from fluorescence microscopy images. PLoS One (2008) 3.74
Miniature synaptic transmission and BDNF modulate dendritic spine growth and form in rat CA1 neurones. J Physiol (2003) 1.67
A novel computational approach for automatic dendrite spines detection in two-photon laser scan microscopy. J Neurosci Methods (2007) 1.53
Neuronal morphology goes digital: a research hub for cellular and system neuroscience. Neuron (2013) 1.53
SynPAnal: software for rapid quantification of the density and intensity of protein puncta from fluorescence microscopy images of neurons. PLoS One (2014) 1.40
SynGAP regulates steady-state and activity-dependent phosphorylation of cofilin. J Neurosci (2008) 1.35
Three-dimensional neuron tracing by voxel scooping. J Neurosci Methods (2009) 1.15
Chronic alcohol drinking alters neuronal dendritic spines in the brain reward center nucleus accumbens. Brain Res (2007) 1.11
Dendritic vulnerability in neurodegenerative disease: insights from analyses of cortical pyramidal neurons in transgenic mouse models. Brain Struct Funct (2010) 1.10
Spines and neurite branches function as geometric attractors that enhance protein kinase C action. J Cell Biol (2005) 1.07
Deletion of densin-180 results in abnormal behaviors associated with mental illness and reduces mGluR5 and DISC1 in the postsynaptic density fraction. J Neurosci (2011) 1.07
The actions of BDNF on dendritic spine density and morphology in organotypic slice cultures depend on the presence of serum in culture media. J Neurosci Methods (2007) 1.06
MDL constrained 3-D grayscale skeletonization algorithm for automated extraction of dendrites and spines from fluorescence confocal images. Neuroinformatics (2009) 1.06
Robust adaptive 3-D segmentation of vessel laminae from fluorescence confocal microscope images and parallel GPU implementation. IEEE Trans Med Imaging (2010) 1.03
Robust 3D reconstruction and identification of dendritic spines from optical microscopy imaging. Med Image Anal (2008) 1.01
Automated 4D analysis of dendritic spine morphology: applications to stimulus-induced spine remodeling and pharmacological rescue in a disease model. Mol Brain (2011) 0.98
Comparative analysis of single and combined APP/APLP knockouts reveals reduced spine density in APP-KO mice that is prevented by APPsα expression. Acta Neuropathol Commun (2014) 0.95
Hyperforin modulates dendritic spine morphology in hippocampal pyramidal neurons by activating Ca(2+) -permeable TRPC6 channels. Hippocampus (2012) 0.93
An automated pipeline for dendrite spine detection and tracking of 3D optical microscopy neuron images of in vivo mouse models. Neuroinformatics (2009) 0.88
Divergent roles of p75NTR and Trk receptors in BDNF's effects on dendritic spine density and morphology. Neural Plast (2012) 0.87
A neurocomputational method for fully automated 3D dendritic spine detection and segmentation of medium-sized spiny neurons. Neuroimage (2010) 0.86
Methods of dendritic spine detection: from Golgi to high-resolution optical imaging. Neuroscience (2012) 0.84
N-cadherin, spine dynamics, and synaptic function. Front Neurosci (2008) 0.83
Computational Systems Bioinformatics and Bioimaging for Pathway Analysis and Drug Screening. Proc IEEE Inst Electr Electron Eng (2008) 0.80
Integration of multiscale dendritic spine structure and function data into systems biology models. Front Neuroanat (2014) 0.80
Detection of Dendritic Spines Using Wavelet-Based Conditional Symmetric Analysis and Regularized Morphological Shared-Weight Neural Networks. Comput Math Methods Med (2015) 0.78
Aβ-mediated spine changes in the hippocampus are microtubule-dependent and can be reversed by a subnanomolar concentration of the microtubule-stabilizing agent epothilone D. Neuropharmacology (2016) 0.77
A three-dimensional image processing program for accurate, rapid, and semi-automated segmentation of neuronal somata with dense neurite outgrowth. Front Neuroanat (2015) 0.76
Detection of axonal synapses in 3D two-photon images. PLoS One (2017) 0.75
Automated spatio-temporal analysis of dendritic spines and related protein dynamics. PLoS One (2017) 0.75
Imaging neural activity in worms, flies and mice with improved GCaMP calcium indicators. Nat Methods (2009) 13.39
Ultrasensitive fluorescent proteins for imaging neuronal activity. Nature (2013) 12.01
Long-term in vivo imaging of experience-dependent synaptic plasticity in adult cortex. Nature (2002) 11.85
ScanImage: flexible software for operating laser scanning microscopes. Biomed Eng Online (2003) 8.59
Genetic dissection of neural circuits. Neuron (2008) 7.97
Channelrhodopsin-2-assisted circuit mapping of long-range callosal projections. Nat Neurosci (2007) 7.65
Experience-dependent structural synaptic plasticity in the mammalian brain. Nat Rev Neurosci (2009) 7.54
Transient and persistent dendritic spines in the neocortex in vivo. Neuron (2005) 6.30
Structure and function of dendritic spines. Annu Rev Physiol (2002) 6.17
Optimization of a GCaMP calcium indicator for neural activity imaging. J Neurosci (2012) 6.09
Sparse optical microstimulation in barrel cortex drives learned behaviour in freely moving mice. Nature (2008) 6.08
The subcellular organization of neocortical excitatory connections. Nature (2009) 5.98
Long-term, high-resolution imaging in the mouse neocortex through a chronic cranial window. Nat Protoc (2009) 5.68
Experience-dependent and cell-type-specific spine growth in the neocortex. Nature (2006) 5.63
A toolbox of Cre-dependent optogenetic transgenic mice for light-induced activation and silencing. Nat Neurosci (2012) 4.87
The life cycle of Ca(2+) ions in dendritic spines. Neuron (2002) 4.52
Locally dynamic synaptic learning rules in pyramidal neuron dendrites. Nature (2007) 4.48
Rapid redistribution of synaptic PSD-95 in the neocortex in vivo. PLoS Biol (2006) 4.12
Circuit analysis of experience-dependent plasticity in the developing rat barrel cortex. Neuron (2003) 3.65
Cell type-specific structural plasticity of axonal branches and boutons in the adult neocortex. Neuron (2006) 3.61
Spine growth precedes synapse formation in the adult neocortex in vivo. Nat Neurosci (2006) 3.57
Geometric and functional organization of cortical circuits. Nat Neurosci (2005) 3.22
Learning-related fine-scale specificity imaged in motor cortex circuits of behaving mice. Nature (2010) 3.18
Neural activity in barrel cortex underlying vibrissa-based object localization in mice. Neuron (2010) 3.16
A Cre-dependent GCaMP3 reporter mouse for neuronal imaging in vivo. J Neurosci (2012) 3.13
Facilitation at single synapses probed with optical quantal analysis. Nat Neurosci (2002) 3.13
Interdigitated paralemniscal and lemniscal pathways in the mouse barrel cortex. PLoS Biol (2006) 2.89
A proposal for a coordinated effort for the determination of brainwide neuroanatomical connectivity in model organisms at a mesoscopic scale. PLoS Comput Biol (2009) 2.88
The spread of Ras activity triggered by activation of a single dendritic spine. Science (2008) 2.87
Laminar and columnar organization of ascending excitatory projections to layer 2/3 pyramidal neurons in rat barrel cortex. J Neurosci (2005) 2.81
Continuous shifts in the active set of spinal interneurons during changes in locomotor speed. Nat Neurosci (2008) 2.80
Imaging calcium concentration dynamics in small neuronal compartments. Sci STKE (2004) 2.80
Monitoring neural activity and [Ca2+] with genetically encoded Ca2+ indicators. J Neurosci (2004) 2.80
Vibrissa-based object localization in head-fixed mice. J Neurosci (2010) 2.69
Induction of spine growth and synapse formation by regulation of the spine actin cytoskeleton. Neuron (2004) 2.68
Supersensitive Ras activation in dendrites and spines revealed by two-photon fluorescence lifetime imaging. Nat Neurosci (2006) 2.66
NMDA receptor subunit-dependent [Ca2+] signaling in individual hippocampal dendritic spines. J Neurosci (2005) 2.65
The functional microarchitecture of the mouse barrel cortex. PLoS Biol (2007) 2.64
Nonlinear dendritic integration of sensory and motor input during an active sensing task. Nature (2012) 2.56
Stereotyped odor-evoked activity in the mushroom body of Drosophila revealed by green fluorescent protein-based Ca2+ imaging. J Neurosci (2004) 2.44
A genetically encoded fluorescent sensor of ERK activity. Proc Natl Acad Sci U S A (2008) 2.34
Experience strengthening transmission by driving AMPA receptors into synapses. Science (2003) 2.34
Characterization and subcellular targeting of GCaMP-type genetically-encoded calcium indicators. PLoS One (2008) 2.31
Rapid and reversible chemical inactivation of synaptic transmission in genetically targeted neurons. Neuron (2005) 2.26
Diverse modes of axon elaboration in the developing neocortex. PLoS Biol (2005) 2.26
Activity in motor-sensory projections reveals distributed coding in somatosensation. Nature (2012) 2.24
Rapid functional maturation of nascent dendritic spines. Neuron (2009) 2.21
Long-range neuronal circuits underlying the interaction between sensory and motor cortex. Neuron (2011) 2.20
Myosin-dependent targeting of transmembrane proteins to neuronal dendrites. Nat Neurosci (2009) 2.14
Ephus: multipurpose data acquisition software for neuroscience experiments. Front Neural Circuits (2010) 2.12
The number of glutamate receptors opened by synaptic stimulation in single hippocampal spines. J Neurosci (2004) 1.83
Plasticity of calcium channels in dendritic spines. Nat Neurosci (2003) 1.82
Circuit and plasticity defects in the developing somatosensory cortex of FMR1 knock-out mice. J Neurosci (2008) 1.72
Laminar analysis of excitatory local circuits in vibrissal motor and sensory cortical areas. PLoS Biol (2011) 1.71
Subcellular domain-restricted GABAergic innervation in primary visual cortex in the absence of sensory and thalamic inputs. Nat Neurosci (2004) 1.65
High-resolution in vivo imaging of the neurovascular unit during spreading depression. J Neurosci (2007) 1.61
Reverse engineering the mouse brain. Nature (2009) 1.58
Nonlinear [Ca2+] signaling in dendrites and spines caused by activity-dependent depression of Ca2+ extrusion. J Neurosci (2006) 1.55
Cetaceans have complex brains for complex cognition. PLoS Biol (2007) 1.55
Precise development of functional and anatomical columns in the neocortex. Neuron (2004) 1.51
Neural coding during active somatosensation revealed using illusory touch. Nat Neurosci (2013) 1.49
From cudgel to scalpel: toward precise neural control with optogenetics. Nat Methods (2010) 1.45
Organization of cortical and thalamic input to pyramidal neurons in mouse motor cortex. J Neurosci (2013) 1.44
Subcellular dynamics of type II PKA in neurons. Neuron (2009) 1.43
A protocol for preparing GFP-labeled neurons previously imaged in vivo and in slice preparations for light and electron microscopic analysis. Nat Protoc (2009) 1.40
Structural plasticity underlies experience-dependent functional plasticity of cortical circuits. J Neurosci (2010) 1.40
Preparation of gene gun bullets and biolistic transfection of neurons in slice culture. J Vis Exp (2008) 1.40
The functional asymmetry of auditory cortex is reflected in the organization of local cortical circuits. Nat Neurosci (2010) 1.31
Activity-dependent synaptogenesis in the adult Mammalian cortex. Neuron (2002) 1.30
The functional properties of barrel cortex neurons projecting to the primary motor cortex. J Neurosci (2010) 1.30
Dendrodendritic synaptic signals in olfactory bulb granule cells: local spine boost and global low-threshold spike. J Neurosci (2005) 1.30
Automated tracking of whiskers in videos of head fixed rodents. PLoS Comput Biol (2012) 1.29
Mechanisms of lateral inhibition in the olfactory bulb: efficiency and modulation of spike-evoked calcium influx into granule cells. J Neurosci (2003) 1.26
Automated algorithms for multiscale morphometry of neuronal dendrites. Neural Comput (2004) 1.25
Activity-dependent growth of new dendritic spines is regulated by the proteasome. Neuron (2012) 1.23
Multiple new site-specific recombinases for use in manipulating animal genomes. Proc Natl Acad Sci U S A (2011) 1.23
Activity-dependent plasticity of the NMDA-receptor fractional Ca2+ current. Neuron (2007) 1.17
Loss of PSD-95 enrichment is not a prerequisite for spine retraction. J Neurosci (2011) 1.17
Regular spiking and intrinsic bursting pyramidal cells show orthogonal forms of experience-dependent plasticity in layer V of barrel cortex. Neuron (2012) 1.16
Predominant enhancement of glucose uptake in astrocytes versus neurons during activation of the somatosensory cortex. J Neurosci (2010) 1.16
Development of intrinsic properties and excitability of layer 2/3 pyramidal neurons during a critical period for sensory maps in rat barrel cortex. J Neurophysiol (2004) 1.13
Chronic alcohol drinking alters neuronal dendritic spines in the brain reward center nucleus accumbens. Brain Res (2007) 1.11
The mechanical variables underlying object localization along the axis of the whisker. J Neurosci (2013) 1.11
LTP-induced long-term stabilization of individual nascent dendritic spines. J Neurosci (2013) 1.06
Experience-dependent changes in basal dendritic branching of layer 2/3 pyramidal neurons during a critical period for developmental plasticity in rat barrel cortex. Cereb Cortex (2004) 1.06
Synapse-specific and size-dependent mechanisms of spine structural plasticity accompanying synaptic weakening. Proc Natl Acad Sci U S A (2012) 1.05
Thalamocortical input onto layer 5 pyramidal neurons measured using quantitative large-scale array tomography. Front Neural Circuits (2013) 1.00
Tapered whiskers are required for active tactile sensation. Elife (2013) 0.99
Imaging neocortical neurons through a chronic cranial window. Cold Spring Harb Protoc (2012) 0.95
Novel approaches to monitor and manipulate single neurons in vivo. J Neurosci (2004) 0.90
Do spines and dendrites distribute dye evenly? Trends Neurosci (2004) 0.90
An algorithm for neurite outgrowth reconstruction. J Neurosci Methods (2003) 0.89
Structural plasticity within the barrel cortex during initial phases of whisker-dependent learning. J Neurosci (2014) 0.89
Breaking it down: the ubiquitin proteasome system in neuronal morphogenesis. Neural Plast (2013) 0.87
Regulation of cpg15 expression during single whisker experience in the barrel cortex of adult mice. J Neurobiol (2005) 0.84
A claim in search of evidence: reply to Manger's thermogenesis hypothesis of cetacean brain structure. Biol Rev Camb Philos Soc (2008) 0.81
Chipping away at brain function: mining for insights with microarrays. Curr Opin Neurobiol (2003) 0.80