Published in Prog Nucleic Acid Res Mol Biol on January 01, 2002
A large-scale analysis of mRNA polyadenylation of human and mouse genes. Nucleic Acids Res (2005) 7.24
A new yeast poly(A) polymerase complex involved in RNA quality control. PLoS Biol (2005) 5.43
Three functional variants of IFN regulatory factor 5 (IRF5) define risk and protective haplotypes for human lupus. Proc Natl Acad Sci U S A (2007) 4.71
Poly(A)-binding proteins: multifunctional scaffolds for the post-transcriptional control of gene expression. Genome Biol (2003) 4.45
Biased alternative polyadenylation in human tissues. Genome Biol (2005) 3.96
Ending the message: poly(A) signals then and now. Genes Dev (2011) 3.47
Protein factors in pre-mRNA 3'-end processing. Cell Mol Life Sci (2008) 3.44
Bioinformatic identification of candidate cis-regulatory elements involved in human mRNA polyadenylation. RNA (2005) 3.08
Gene and genon concept: coding versus regulation. A conceptual and information-theoretic analysis of genetic storage and expression in the light of modern molecular biology. Theory Biosci (2007) 2.89
3' end mRNA processing: molecular mechanisms and implications for health and disease. EMBO J (2008) 2.67
Widespread mRNA polyadenylation events in introns indicate dynamic interplay between polyadenylation and splicing. Genome Res (2007) 2.55
PolyA_DB 2: mRNA polyadenylation sites in vertebrate genes. Nucleic Acids Res (2007) 2.22
RNA-specific ribonucleotidyl transferases. RNA (2007) 2.15
Evidence that polyadenylation factor CPSF-73 is the mRNA 3' processing endonuclease. RNA (2004) 2.10
Primary microRNA transcript retention at sites of transcription leads to enhanced microRNA production. J Cell Biol (2008) 1.98
Downstream elements of mammalian pre-mRNA polyadenylation signals: primary, secondary and higher-order structures. Nucleic Acids Res (2003) 1.98
Polyadenylation of ribosomal RNA in human cells. Nucleic Acids Res (2006) 1.93
Human Fip1 is a subunit of CPSF that binds to U-rich RNA elements and stimulates poly(A) polymerase. EMBO J (2004) 1.92
Mechanism of poly(A) polymerase: structure of the enzyme-MgATP-RNA ternary complex and kinetic analysis. Structure (2007) 1.83
Functional interactions between the transcription and mRNA 3' end processing machineries mediated by Ssu72 and Sub1. Genes Dev (2003) 1.79
Alternative polyadenylation of cyclooxygenase-2. Nucleic Acids Res (2005) 1.61
The GLD-2 poly(A) polymerase activates gld-1 mRNA in the Caenorhabditis elegans germ line. Proc Natl Acad Sci U S A (2006) 1.59
Systematic variation in mRNA 3'-processing signals during mouse spermatogenesis. Nucleic Acids Res (2006) 1.56
Stimulation of poly(A) polymerase through a direct interaction with the nuclear poly(A) binding protein allosterically regulated by RNA. EMBO J (2003) 1.55
Recognition of polyadenosine RNA by zinc finger proteins. Proc Natl Acad Sci U S A (2007) 1.43
The essential WD repeat protein Swd2 has dual functions in RNA polymerase II transcription termination and lysine 4 methylation of histone H3. Mol Cell Biol (2004) 1.38
RNA polymerase II kinetics in polo polyadenylation signal selection. EMBO J (2011) 1.34
Structure of a nucleotide-bound Clp1-Pcf11 polyadenylation factor. Nucleic Acids Res (2006) 1.34
Phylogenetic analysis of mRNA polyadenylation sites reveals a role of transposable elements in evolution of the 3'-end of genes. Nucleic Acids Res (2008) 1.33
Distinct roles of non-canonical poly(A) polymerases in RNA metabolism. PLoS Genet (2009) 1.33
Loss of polyadenylation protein tauCstF-64 causes spermatogenic defects and male infertility. Proc Natl Acad Sci U S A (2007) 1.29
MicroRNA-mediated up-regulation of an alternatively polyadenylated variant of the mouse cytoplasmic {beta}-actin gene. Nucleic Acids Res (2008) 1.25
RNA polyadenylation in Archaea: not observed in Haloferax while the exosome polynucleotidylates RNA in Sulfolobus. EMBO Rep (2005) 1.25
Functions for S. cerevisiae Swd2p in 3' end formation of specific mRNAs and snoRNAs and global histone 3 lysine 4 methylation. RNA (2004) 1.22
Specific trans-acting proteins interact with auxiliary RNA polyadenylation elements in the COX-2 3'-UTR. RNA (2007) 1.22
New ways to meet your (3') end oligouridylation as a step on the path to destruction. Genes Dev (2008) 1.19
C. elegans sequences that control trans-splicing and operon pre-mRNA processing. RNA (2007) 1.18
PDE12 removes mitochondrial RNA poly(A) tails and controls translation in human mitochondria. Nucleic Acids Res (2011) 1.18
Addition of poly(A) and poly(A)-rich tails during RNA degradation in the cytoplasm of human cells. Proc Natl Acad Sci U S A (2010) 1.15
Pti1p and Ref2p found in association with the mRNA 3' end formation complex direct snoRNA maturation. EMBO J (2003) 1.13
GLD-2/RNP-8 cytoplasmic poly(A) polymerase is a broad-spectrum regulator of the oogenesis program. Proc Natl Acad Sci U S A (2010) 1.10
The Streptomyces coelicolor polynucleotide phosphorylase homologue, and not the putative poly(A) polymerase, can polyadenylate RNA. J Bacteriol (2003) 1.10
p54nrb is a component of the snRNP-free U1A (SF-A) complex that promotes pre-mRNA cleavage during polyadenylation. RNA (2006) 1.09
Rampant polyuridylylation of plastid gene transcripts in the dinoflagellate Lingulodinium. Nucleic Acids Res (2006) 1.09
The structure of the CstF-77 homodimer provides insights into CstF assembly. Nucleic Acids Res (2007) 1.09
Molecular dissection of mRNA poly(A) tail length control in yeast. Nucleic Acids Res (2008) 1.07
Alternative mRNA polyadenylation in eukaryotes: an effective regulator of gene expression. Wiley Interdiscip Rev RNA (2011) 1.06
RNA polyadenylation and degradation in different Archaea; roles of the exosome and RNase R. Nucleic Acids Res (2006) 1.04
Mitochondrial poly(A) polymerase and polyadenylation. Biochim Biophys Acta (2011) 1.03
Genome-wide control of polyadenylation site choice by CPSF30 in Arabidopsis. Plant Cell (2012) 1.02
Bacterial/archaeal/organellar polyadenylation. Wiley Interdiscip Rev RNA (2011) 1.00
Subnuclear compartmentalization of transiently expressed polyadenylated pri-microRNAs: processing at transcription sites or accumulation in SC35 foci. Cell Cycle (2009) 1.00
Structure of the Rna15 RRM-RNA complex reveals the molecular basis of GU specificity in transcriptional 3'-end processing factors. Nucleic Acids Res (2010) 0.99
Structural basis for dimerization and activity of human PAPD1, a noncanonical poly(A) polymerase. Mol Cell (2011) 0.98
Human N-acetyltransferase 1 *10 and *11 alleles increase protein expression through distinct mechanisms and associate with sulfamethoxazole-induced hypersensitivity. Pharmacogenet Genomics (2011) 0.97
A bipartite U1 site represses U1A expression by synergizing with PIE to inhibit nuclear polyadenylation. RNA (2007) 0.96
A family of splice variants of CstF-64 expressed in vertebrate nervous systems. BMC Mol Biol (2009) 0.95
Structural biology of poly(A) site definition. Wiley Interdiscip Rev RNA (2011) 0.94
The testis-specific double bromodomain-containing protein BRDT forms a complex with multiple spliceosome components and is required for mRNA splicing and 3'-UTR truncation in round spermatids. Nucleic Acids Res (2012) 0.94
The poly A polymerase Star-PAP controls 3'-end cleavage by promoting CPSF interaction and specificity toward the pre-mRNA. EMBO J (2010) 0.93
Cotranscriptional recruitment of the nuclear poly(A)-binding protein Pab2 to nascent transcripts and association with translating mRNPs. Nucleic Acids Res (2009) 0.92
Alternative polyadenylation of MeCP2: Influence of cis-acting elements and trans-acting factors. RNA Biol (2010) 0.91
The interplay of Hfq, poly(A) polymerase I and exoribonucleases at the 3' ends of RNAs resulting from Rho-independent termination: A tentative model. RNA Biol (2013) 0.90
The poly(A)-limiting element enhances mRNA accumulation by increasing the efficiency of pre-mRNA 3' processing. RNA (2005) 0.90
Differences in polyadenylation site choice between somatic and male germ cells. BMC Mol Biol (2006) 0.90
Characterization of wild-type and alternate transcription termination signals in the Rift Valley fever virus genome. J Virol (2011) 0.90
Regulation of NAB2 mRNA 3'-end formation requires the core exosome and the Trf4p component of the TRAMP complex. RNA (2009) 0.90
Polyadenylation proteins CstF-64 and tauCstF-64 exhibit differential binding affinities for RNA polymers. Biochem J (2007) 0.89
The hinge domain of the cleavage stimulation factor protein CstF-64 is essential for CstF-77 interaction, nuclear localization, and polyadenylation. J Biol Chem (2009) 0.88
Alternative polyadenylation signals and promoters act in concert to control tissue-specific expression of the Opitz Syndrome gene MID1. BMC Mol Biol (2007) 0.88
Heat shock protein 90 stabilizes nucleolin to increase mRNA stability in mitosis. J Biol Chem (2011) 0.86
Species-specific cis-regulatory elements in the 3'-untranslated region direct alternative polyadenylation of bone morphogenetic protein 2 mRNA. J Biol Chem (2008) 0.86
CKI isoforms α and ε regulate Star-PAP target messages by controlling Star-PAP poly(A) polymerase activity and phosphoinositide stimulation. Nucleic Acids Res (2011) 0.85
Differential expression of endogenous plant cell wall degrading enzyme genes in the stick insect (Phasmatodea) midgut. BMC Genomics (2014) 0.85
Mutations in the middle domain of yeast poly(A) polymerase affect interactions with RNA but not ATP. RNA (2004) 0.85
The Rift Valley Fever virus protein NSm and putative cellular protein interactions. Virol J (2012) 0.83
Alternative polyadenylation sites reveal distinct chromatin accessibility and histone modification in human cell lines. Bioinformatics (2013) 0.82
mRNA 3' end processing factors: a phylogenetic comparison. Comp Funct Genomics (2012) 0.82
Deregulation of poly(A) polymerase I in Escherichia coli inhibits protein synthesis and leads to cell death. Nucleic Acids Res (2012) 0.82
Phosphorylation regulates the Star-PAP-PIPKIα interaction and directs specificity toward mRNA targets. Nucleic Acids Res (2015) 0.77
Domain-level rocking motion within a polymerase that translocates on single-stranded nucleic acid. Acta Crystallogr D Biol Crystallogr (2013) 0.76
The 25 kDa subunit of cleavage factor Im Is a RNA-binding protein that interacts with the poly(A) polymerase in Entamoeba histolytica. PLoS One (2013) 0.76
Dynamic landscape of alternative polyadenylation during retinal development. Cell Mol Life Sci (2016) 0.75
CstF-64 and 3'-UTR cis-element determine Star-PAP specificity for target mRNA selection by excluding PAPα. Nucleic Acids Res (2015) 0.75
Alternative polyadenylation in a family of paralogous epb41 genes generates protein 4.1 diversity. RNA Biol (2016) 0.75
Widespread 3'-end uridylation in eukaryotic RNA viruses. Sci Rep (2016) 0.75