Published in Gene Expr Patterns on March 01, 2003
Stable transgenesis in the marine annelid Platynereis dumerilii sheds new light on photoreceptor evolution. Proc Natl Acad Sci U S A (2013) 1.04
Regulation of the retinal determination gene dachshund in the embryonic head and developing eye of Drosophila. Dev Biol (2006) 0.96
Expression of Distal-less, dachshund, and optomotor blind in Neanthes arenaceodentata (Annelida, Nereididae) does not support homology of appendage-forming mechanisms across the Bilateria. Dev Genes Evol (2010) 0.83
Mesodermal gene expression during the embryonic and larval development of the articulate brachiopod Terebratalia transversa. Evodevo (2015) 0.80
A gene catalogue of the amphioxus nervous system. Int J Biol Sci (2006) 0.78
The MIQE guidelines: minimum information for publication of quantitative real-time PCR experiments. Clin Chem (2009) 40.90
The genome sequence of the malaria mosquito Anopheles gambiae. Science (2002) 20.36
Cyclical DNA methylation of a transcriptionally active promoter. Nature (2008) 7.62
Genome sequencing of pediatric medulloblastoma links catastrophic DNA rearrangements with TP53 mutations. Cell (2012) 6.07
Transient cyclical methylation of promoter DNA. Nature (2008) 5.19
DELLY: structural variant discovery by integrated paired-end and split-read analysis. Bioinformatics (2012) 4.79
Dissecting the genomic complexity underlying medulloblastoma. Nature (2012) 4.77
Replicative senescence of mesenchymal stem cells: a continuous and organized process. PLoS One (2008) 4.37
CRTAP is required for prolyl 3- hydroxylation and mutations cause recessive osteogenesis imperfecta. Cell (2006) 4.10
A sensitive array for microRNA expression profiling (miChip) based on locked nucleic acids (LNA). RNA (2006) 3.71
Accounting for technical noise in single-cell RNA-seq experiments. Nat Methods (2013) 3.61
The digital MIQE guidelines: Minimum Information for Publication of Quantitative Digital PCR Experiments. Clin Chem (2013) 3.38
Integrative genomic analyses reveal an androgen-driven somatic alteration landscape in early-onset prostate cancer. Cancer Cell (2013) 3.08
The amphioxus genome illuminates vertebrate origins and cephalochordate biology. Genome Res (2008) 3.04
Importin 8 is a gene silencing factor that targets argonaute proteins to distinct mRNAs. Cell (2009) 2.98
Aging and replicative senescence have related effects on human stem and progenitor cells. PLoS One (2009) 2.62
MicroRNA signatures predict oestrogen receptor, progesterone receptor and HER2/neu receptor status in breast cancer. Breast Cancer Res (2009) 2.59
Diverse roles of hnRNP L in mammalian mRNA processing: a combined microarray and RNAi analysis. RNA (2007) 2.48
Vertebrate-type intron-rich genes in the marine annelid Platynereis dumerilii. Science (2005) 2.31
The liver-specific microRNA miR-122 controls systemic iron homeostasis in mice. J Clin Invest (2011) 2.30
Genome-wide RNAi screening identifies human proteins with a regulatory function in the early secretory pathway. Nat Cell Biol (2012) 1.88
CRX ChIP-seq reveals the cis-regulatory architecture of mouse photoreceptors. Genome Res (2010) 1.77
Direct and indirect effects of H-NS and Fis on global gene expression control in Escherichia coli. Nucleic Acids Res (2010) 1.71
Developmentally regulated switching of titin size alters myofibrillar stiffness in the perinatal heart. Circ Res (2004) 1.70
A dynamic gradient of Wnt signaling controls initiation of neurogenesis in the mammalian cortex and cellular specification in the hippocampus. Dev Biol (2007) 1.69
Anterior interbody fusion of the cervical spine with Zero-P spacer: prospective comparative study-clinical and radiological results at a minimum 2 years after surgery. Spine (Phila Pa 1976) (2013) 1.65
Treatment of thoracolumbar trauma by short-segment percutaneous transpedicular screw instrumentation: prospective comparative study with a minimum 2-year follow-up. J Neurosurg Spine (2013) 1.61
The need for transparency and good practices in the qPCR literature. Nat Methods (2013) 1.58
Engineering the mouse genome with bacterial artificial chromosomes to create multipurpose alleles. Nat Biotechnol (2003) 1.57
DACH1 inhibits transforming growth factor-beta signaling through binding Smad4. J Biol Chem (2003) 1.47
miChip: an array-based method for microRNA expression profiling using locked nucleic acid capture probes. Nat Protoc (2008) 1.43
Transcriptional complexes engaged by apo-estrogen receptor-alpha isoforms have divergent outcomes. EMBO J (2004) 1.42
Nuclear hormone 1α,25-dihydroxyvitamin D3 elicits a genome-wide shift in the locations of VDR chromatin occupancy. Nucleic Acids Res (2011) 1.38
Multiple mechanisms induce transcriptional silencing of a subset of genes, including oestrogen receptor alpha, in response to deacetylase inhibition by valproic acid and trichostatin A. Oncogene (2005) 1.36
Life cycle transcriptome of the malaria mosquito Anopheles gambiae and comparison with the fruitfly Drosophila melanogaster. Proc Natl Acad Sci U S A (2007) 1.36
Spatial and temporal regulation of Wnt/beta-catenin signaling is essential for development of the retinal pigment epithelium. Dev Biol (2009) 1.34
Preliminary observations on the spawning conditions of the European amphioxus (Branchiostoma lanceolatum) in captivity. J Exp Zool B Mol Dev Evol (2004) 1.33
Kaposi's sarcoma herpesvirus microRNAs target caspase 3 and regulate apoptosis. PLoS Pathog (2011) 1.33
Primer sequence disclosure: a clarification of the MIQE guidelines. Clin Chem (2011) 1.32
An efficient method for genome-wide polyadenylation site mapping and RNA quantification. Nucleic Acids Res (2013) 1.30
Multiple epigenetic mechanisms and the piRNA pathway enforce LINE1 silencing during adult spermatogenesis. Mol Cell (2013) 1.29
Insights into spawning behavior and development of the European amphioxus (Branchiostoma lanceolatum). J Exp Zool B Mol Dev Evol (2007) 1.29
Comparison of 3 fusion techniques in the treatment of the degenerative cervical spine disease. Is stand-alone autograft really the "gold standard?": prospective study with 2-year follow-up. Spine (Phila Pa 1976) (2012) 1.28
Global analysis of estrogen receptor beta binding to breast cancer cell genome reveals an extensive interplay with estrogen receptor alpha for target gene regulation. BMC Genomics (2011) 1.28
A genomic switch at the transition from cell proliferation to terminal differentiation in the Drosophila eye. Dev Cell (2002) 1.27
RNA degradation compromises the reliability of microRNA expression profiling. BMC Biotechnol (2009) 1.27
Microcontact printing of DNA molecules. Anal Chem (2004) 1.26
A role for Fkbp6 and the chaperone machinery in piRNA amplification and transposon silencing. Mol Cell (2012) 1.26
Pax-Six-Eya-Dach network during amphioxus development: conservation in vitro but context specificity in vivo. Dev Biol (2007) 1.26
Exome sequencing identifies MRPL3 mutation in mitochondrial cardiomyopathy. Hum Mutat (2011) 1.22
Abnormal lens morphogenesis and ectopic lens formation in the absence of beta-catenin function. Genesis (2007) 1.22
Alternative splicing microarrays reveal functional expression of neuron-specific regulators in Hodgkin lymphoma cells. J Biol Chem (2004) 1.22
Modular proteins from the Drosophila sallimus (sls) gene and their expression in muscles with different extensibility. J Mol Biol (2007) 1.21
Eye evolution: common use and independent recruitment of genetic components. Philos Trans R Soc Lond B Biol Sci (2009) 1.20
Genomics of DNA cytosine methylation in Escherichia coli reveals its role in stationary phase transcription. Nat Commun (2012) 1.19
Lens morphogenesis is dependent on Pax6-mediated inhibition of the canonical Wnt/beta-catenin signaling in the lens surface ectoderm. Genesis (2010) 1.19
Autophagy contributes to inflammation in patients with TNFR-associated periodic syndrome (TRAPS). Ann Rheum Dis (2012) 1.19
The molecular elasticity of the insect flight muscle proteins projectin and kettin. Proc Natl Acad Sci U S A (2006) 1.18
Df31 protein and snoRNAs maintain accessible higher-order structures of chromatin. Mol Cell (2012) 1.17
Adhesion of hematopoietic progenitor cells to human mesenchymal stem cells as a model for cell-cell interaction. Exp Hematol (2007) 1.17
Inhibition of aurora kinases for tailored risk-adapted treatment of multiple myeloma. Blood (2009) 1.16
z-Leucinyl-leucinyl-norleucinal induces apoptosis of human glioblastoma tumor-initiating cells by proteasome inhibition and mitotic arrest response. Mol Cancer Res (2009) 1.15
Wnt-mediated down-regulation of Sp1 target genes by a transcriptional repressor Sp5. J Biol Chem (2006) 1.13
miChip: a microarray platform for expression profiling of microRNAs based on locked nucleic acid (LNA) oligonucleotide capture probes. Methods (2007) 1.10
An assessment of air as a source of DNA contamination encountered when performing PCR. J Biomol Tech (2009) 1.08
Synthesis and antitumor activity of some substituted indazole derivatives. Arch Pharm (Weinheim) (2014) 1.07
RNA-Seq analysis in mutant zebrafish reveals role of U1C protein in alternative splicing regulation. EMBO J (2011) 1.05
Comprehensive survey and classification of homeobox genes in the genome of amphioxus, Branchiostoma floridae. Dev Genes Evol (2008) 1.05
Diversity of vertebrate splicing factor U2AF35: identification of alternatively spliced U2AF1 mRNAS. J Biol Chem (2004) 1.03
Alternative polyadenylation diversifies post-transcriptional regulation by selective RNA-protein interactions. Mol Syst Biol (2014) 1.01
Targeted mutagenesis of the murine IRP1 and IRP2 genes reveals context-dependent RNA processing differences in vivo. RNA (2004) 1.00
HnRNP L and L-like cooperate in multiple-exon regulation of CD45 alternative splicing. Nucleic Acids Res (2012) 0.98
Primate genome architecture influences structural variation mechanisms and functional consequences. Proc Natl Acad Sci U S A (2013) 0.97
Cubozoan jellyfish: an Evo/Devo model for eyes and other sensory systems. Int J Dev Biol (2004) 0.97
SUMOylation regulates the chromatin occupancy and anti-proliferative gene programs of glucocorticoid receptor. Nucleic Acids Res (2013) 0.96
Unreliable real-time PCR analysis of human endogenous retrovirus-W (HERV-W) RNA expression and DNA copy number in multiple sclerosis. AIDS Res Hum Retroviruses (2009) 0.96
Iron regulatory protein-1 and -2: transcriptome-wide definition of binding mRNAs and shaping of the cellular proteome by iron regulatory proteins. Blood (2011) 0.96
Thyrotroph embryonic factor regulates light-induced transcription of repair genes in zebrafish embryonic cells. PLoS One (2010) 0.95
Gene expression deregulation by KRAS G12D and G12V in a BRAF V600E context. Mol Cancer (2008) 0.95
Molecular analysis of the amphioxus frontal eye unravels the evolutionary origin of the retina and pigment cells of the vertebrate eye. Proc Natl Acad Sci U S A (2012) 0.94
The synapsin gene family in basal chordates: evolutionary perspectives in metazoans. BMC Evol Biol (2010) 0.94
Characterization of an Escherichia coli elaC deletion mutant. Biochem Biophys Res Commun (2004) 0.93
Reactive oxygen species, Ki-Ras, and mitochondrial superoxide dismutase cooperate in nerve growth factor-induced differentiation of PC12 cells. J Biol Chem (2010) 0.92
Synthesis and biological evaluation of novel pyrazole derivatives with anticancer activity. Eur J Med Chem (2011) 0.91
Shh expression in a rudimentary tooth offers new insights into development of the mouse incisor. J Exp Zool B Mol Dev Evol (2011) 0.91
Aneurysm treatment in Europe 2010: an internet survey. Acta Neurochir (Wien) (2012) 0.90
The cellular fate of cortical progenitors is not maintained in neurosphere cultures. Mol Cell Neurosci (2005) 0.89
The Optimedin gene is a downstream target of Pax6. J Biol Chem (2005) 0.89
Complex regulatory element within the gammaE- and gammaF-crystallin enhancers mediates Pax6 regulation and is required for induction by retinoic acid. Gene (2002) 0.87
URB expression in human bone marrow stromal cells and during mouse development. Biochem Biophys Res Commun (2004) 0.86
Identification of a novel set of genes reflecting different in vivo invasive patterns of human GBM cells. BMC Cancer (2012) 0.86
Treatment for brain arteriovenous malformation in the 1998-2011 period and review of the literature. Acta Neurochir (Wien) (2012) 0.86
Eye evolution: lens and cornea as an upgrade of animal visual system. Semin Cell Dev Biol (2007) 0.85