Published in Proc Natl Acad Sci U S A on July 13, 2004
Genome mapping on nanochannel arrays for structural variation analysis and sequence assembly. Nat Biotechnol (2012) 3.43
A single-molecule barcoding system using nanoslits for DNA analysis. Proc Natl Acad Sci U S A (2007) 2.53
Restriction mapping in nanofluidic devices. Proc Natl Acad Sci U S A (2005) 2.28
Single-molecule denaturation mapping of DNA in nanofluidic channels. Proc Natl Acad Sci U S A (2010) 2.13
Single molecule linear analysis of DNA in nano-channel labeled with sequence specific fluorescent probes. Nucleic Acids Res (2010) 1.95
Electro-entropic excluded volume effects on DNA looping and relaxation in nanochannels. Biomicrofluidics (2013) 1.60
Single-molecule studies of repressor-DNA interactions show long-range interactions. Proc Natl Acad Sci U S A (2005) 1.60
Conformational analysis of single DNA molecules undergoing entropically induced motion in nanochannels. Biophys J (2006) 1.56
Simulation of DNA Extension in Nanochannels. Macromolecules (2011) 1.49
Beyond gel electrophoresis: microfluidic separations, fluorescence burst analysis, and DNA stretching. Chem Rev (2012) 1.42
Entropic organization of interphase chromosomes. J Cell Biol (2009) 1.40
Pressure-driven transport of confined DNA polymers in fluidic channels. Proc Natl Acad Sci U S A (2006) 1.35
A Nanofilter Array Chip for Fast Gel-Free Biomolecule Separation. Appl Phys Lett (2005) 1.32
A method for nanofluidic device prototyping using elastomeric collapse. Proc Natl Acad Sci U S A (2009) 1.30
Conformation, length, and speed measurements of electrodynamically stretched DNA in nanochannels. Biophys J (2008) 1.25
Extension of DNA in a nanochannel as a rod-to-coil transition. Phys Rev Lett (2013) 1.20
DNA methylation profiling in nanochannels. Biomicrofluidics (2011) 1.14
Electrokinetically-driven transport of DNA through focused ion beam milled nanofluidic channels. Anal Chem (2012) 1.14
Macromolecular crowding induced elongation and compaction of single DNA molecules confined in a nanochannel. Proc Natl Acad Sci U S A (2009) 1.12
Microfluidic systems for single DNA dynamics. Soft Matter (2012) 1.12
Mobility of a semiflexible chain confined in a nanochannel. Phys Rev Lett (2012) 1.09
Simulation of electrophoretic stretching of DNA in a microcontraction using an obstacle array for conformational preconditioning. Biomicrofluidics (2009) 1.07
Transition between two regimes describing internal fluctuation of DNA in a nanochannel. PLoS One (2011) 1.06
Optoelectronic control of surface charge and translocation dynamics in solid-state nanopores. Nat Nanotechnol (2013) 1.06
Directed self-organization of single DNA molecules in a nanoslit via embedded nanopit arrays. Proc Natl Acad Sci U S A (2009) 1.06
Entropic unfolding of DNA molecules in nanofluidic channels. Nano Lett (2008) 1.01
Modeling the relaxation time of DNA confined in a nanochannel. Biomicrofluidics (2013) 1.00
Integrated view of genome structure and sequence of a single DNA molecule in a nanofluidic device. Proc Natl Acad Sci U S A (2013) 1.00
Fluctuation modes of nanoconfined DNA. J Appl Phys (2012) 0.97
Simulation of conformational preconditioning strategies for electrophoretic stretching of DNA in a microcontraction. Biomicrofluidics (2011) 0.96
Revisiting blob theory for DNA diffusivity in slitlike confinement. Phys Rev Lett (2013) 0.95
Mixed confinement regimes during equilibrium confinement spectroscopy of DNA. J Chem Phys (2014) 0.94
Single molecule analysis of bacterial polymerase chain reaction products in submicrometer fluidic channels. Biomicrofluidics (2007) 0.94
Interplay between chain stiffness and excluded volume of semiflexible polymers confined in nanochannels. J Chem Phys (2014) 0.93
Presentation of large DNA molecules for analysis as nanoconfined dumbbells. Macromolecules (2013) 0.92
Stretching chromatin through confinement. Lab Chip (2009) 0.91
Collapse of DNA in ac electric fields. Phys Rev Lett (2011) 0.91
Large laterally ordered nanochannel arrays from DNA combing and imprinting. Adv Mater (2010) 0.88
Lipid-based passivation in nanofluidics. Nano Lett (2012) 0.88
Distribution of distances between DNA barcode labels in nanochannels close to the persistence length. J Chem Phys (2015) 0.88
Ordered arrays of native chromatin molecules for high-resolution imaging and analysis. ACS Nano (2012) 0.85
Evaluation of the Kirkwood approximation for the diffusivity of channel-confined DNA chains in the de Gennes regime. Biomicrofluidics (2015) 0.84
Hydrodynamics of DNA confined in nanoslits and nanochannels. Eur Phys J Spec Top (2014) 0.84
"Calibration-on-the-spot": How to calibrate an EMCCD camera from its images. Sci Rep (2016) 0.84
Stable and robust polymer nanotubes stretched from polymersomes. Proc Natl Acad Sci U S A (2006) 0.83
Tandem array of nanoelectronic readers embedded coplanar to a fluidic nanochannel for correlated single biopolymer analysis. Biomicrofluidics (2014) 0.83
Micro- and nanoscale devices for the investigation of epigenetics and chromatin dynamics. Nat Nanotechnol (2013) 0.83
Effects of Hfq on the conformation and compaction of DNA. Nucleic Acids Res (2015) 0.82
Shape transition of semi-flexible macromolecules confined in channel and cavity. Eur Phys J E Soft Matter (2010) 0.82
Knotting of linear DNA in nano-slits and nano-channels: a numerical study. J Biol Phys (2013) 0.81
Complementary metal oxide semiconductor compatible fabrication and characterization of parylene-C covered nanofluidic channels with integrated nanoelectrodes. Biomicrofluidics (2009) 0.81
Translocation of a granular chain in a horizontally vibrated saw-tooth channel. Eur Phys J E Soft Matter (2016) 0.80
The Fluid Mechanics of Genome Mapping. AIChE J (2013) 0.80
Probing transient protein-mediated DNA linkages using nanoconfinement. Biomicrofluidics (2014) 0.80
Stretching DNA by electric field and flow field in microfluidic devices: An experimental validation to the devices designed with computer simulations. Biomicrofluidics (2013) 0.80
A fast and scalable kymograph alignment algorithm for nanochannel-based optical DNA mappings. PLoS One (2015) 0.80
Enhanced discrimination of DNA molecules in nanofluidic channels through multiple measurements. Lab Chip (2012) 0.80
DNA Brushing Shoulders: Targeted Looping and Scanning of Large DNA Strands. Nano Lett (2015) 0.78
Fabrication of long poly(dimethyl siloxane) nanochannels by replicating protein deposit from confined solution evaporation. Biomicrofluidics (2012) 0.78
Chromatin modification mapping in nanochannels. Biomicrofluidics (2013) 0.78
Surface charge, electroosmotic flow and DNA extension in chemically modified thermoplastic nanoslits and nanochannels. Analyst (2015) 0.78
Modeling the relaxation of internal DNA segments during genome mapping in nanochannels. Biomicrofluidics (2016) 0.77
Visualizing the entire DNA from a chromosome in a single frame. Biomicrofluidics (2015) 0.77
DNA translocation through short nanofluidic channels under asymmetric pulsed electric field. Biomicrofluidics (2014) 0.77
Ultra-low Doping on Two-Dimensional Transition Metal Dichalcogenides using DNA Nanostructure Doped by a Combination of Lanthanide and Metal Ions. Sci Rep (2016) 0.77
Localized Modeling of Biochemical and Flow Interactions during Cancer Cell Adhesion. PLoS One (2015) 0.77
Understanding the physics of DNA using nanoscale single-molecule manipulation. Front Phys (2012) 0.75
Thin-film microfabricated nanofluidic arrays for size-selective protein fractionation. Lab Chip (2013) 0.75
Cylindrical glass nanocapillaries patterned via coarse lithography (>1 μm) for biomicrofluidic applications. Biomicrofluidics (2012) 0.75
Applications of Semiconductor Fabrication Methods to Nanomedicine: A Review of Recent Inventions and Techniques. Recent Pat Nanomed (2013) 0.75
Analysis of single nucleic acid molecules in micro- and nano-fluidics. Lab Chip (2016) 0.75
Dynamic simulations show repeated narrowing maximizes DNA linearization in elastomeric nanochannels. Biomicrofluidics (2016) 0.75
SENSING DNA WITH ALTERNATING CURRENTS USING A NANOGAP SENSOR EMBEDDED IN A NANOCHANNEL DEVICE. Nano Life (2013) 0.75
Optofluidic chips with nanochannels for dynamic molecular detection using enhanced fluorescence. Biomed Opt Express (2016) 0.75
Structure and dynamics of single DNA molecules manipulated by magnetic tweezers and or flow. Methods (2008) 0.75
Interference of ATP with the fluorescent probes YOYO-1 andYOYO-3 modifies the mechanical properties of intercalator-stained DNA confined in nanochannels. Mikrochim Acta (2015) 0.75
Simulations of DNA stretching by flow field in microchannels with complex geometry. Biomicrofluidics (2014) 0.75
Thermoplastic nanofluidic devices for biomedical applications. Lab Chip (2016) 0.75
Arm retraction and escape transition in semi-flexible star polymer under cylindrical confinement. J Mol Model (2015) 0.75
Exact curvilinear diffusion coefficients in the repton model. Eur Phys J E Soft Matter (2005) 0.75
Characterization of single semiflexible filaments under geometric constraints. Eur Phys J E Soft Matter (2008) 0.75
Spatial confinement induces hairpins in nicked circular DNA. Nucleic Acids Res (2017) 0.75
Electrophoretic stretching and imaging of single native chromatin fibers in nanoslits. Biomicrofluidics (2017) 0.75
Precise nanometer localization analysis for individual fluorescent probes. Biophys J (2002) 22.24
Myosin V walks hand-over-hand: single fluorophore imaging with 1.5-nm localization. Science (2003) 20.21
Nucleotide sequence of bacteriophage lambda DNA. J Mol Biol (1982) 19.80
Direct mechanical measurements of the elasticity of single DNA molecules by using magnetic beads. Science (1992) 9.74
Estimating the persistence length of a worm-like chain molecule from force-extension measurements. Biophys J (1999) 4.42
Whole-genome shotgun optical mapping of Deinococcus radiodurans. Science (1999) 3.56
Stretching of a single tethered polymer in a uniform flow. Science (1995) 3.48
Separation of long DNA molecules in a microfabricated entropic trap array. Science (2000) 3.45
Kinks, rings, and rackets in filamentous structures. Proc Natl Acad Sci U S A (2003) 1.54
Theory of DNA electrophoresis: a look at some current challenges. Electrophoresis (2000) 1.38
The potential and challenges of nanopore sequencing. Nat Biotechnol (2008) 14.24
Real-time kinetics of gene activity in individual bacteria. Cell (2005) 11.08
Continuous particle separation through deterministic lateral displacement. Science (2004) 5.60
Force mapping in epithelial cell migration. Proc Natl Acad Sci U S A (2005) 5.08
Nonmuscle myosin IIA-dependent force inhibits cell spreading and drives F-actin flow. Biophys J (2006) 3.83
Statics and dynamics of single DNA molecules confined in nanochannels. Phys Rev Lett (2005) 3.63
Is the mechanical activity of epithelial cells controlled by deformations or forces? Biophys J (2005) 3.43
Genome mapping on nanochannel arrays for structural variation analysis and sequence assembly. Nat Biotechnol (2012) 3.43
Deterministic hydrodynamics: taking blood apart. Proc Natl Acad Sci U S A (2006) 3.38
Physical nature of bacterial cytoplasm. Phys Rev Lett (2006) 2.91
Single molecule measurements of repressor protein 1D diffusion on DNA. Phys Rev Lett (2006) 2.81
RNA dynamics in live Escherichia coli cells. Proc Natl Acad Sci U S A (2004) 2.57
Rigidity-driven growth and migration of epithelial cells on microstructured anisotropic substrates. Proc Natl Acad Sci U S A (2007) 2.47
Using deep sequencing to characterize the biophysical mechanism of a transcriptional regulatory sequence. Proc Natl Acad Sci U S A (2010) 2.32
Restriction mapping in nanofluidic devices. Proc Natl Acad Sci U S A (2005) 2.28
Acceleration of emergence of bacterial antibiotic resistance in connected microenvironments. Science (2011) 2.26
Bacterial metapopulations in nanofabricated landscapes. Proc Natl Acad Sci U S A (2006) 2.26
Persistent cell motion in the absence of external signals: a search strategy for eukaryotic cells. PLoS One (2008) 2.20
Influence of topology on bacterial social interaction. Proc Natl Acad Sci U S A (2003) 2.07
Critical particle size for fractionation by deterministic lateral displacement. Lab Chip (2006) 2.07
Involvement of all-trans-retinal in acute light-induced retinopathy of mice. J Biol Chem (2009) 2.01
Electrodeless dielectrophoresis of single- and double-stranded DNA. Biophys J (2002) 1.97
Single molecule linear analysis of DNA in nano-channel labeled with sequence specific fluorescent probes. Nucleic Acids Res (2010) 1.95
Motion to form a quorum. Science (2003) 1.95
Strength dependence of cadherin-mediated adhesions. Biophys J (2010) 1.86
A DNA prism for high-speed continuous fractionation of large DNA molecules. Nat Biotechnol (2002) 1.78
Traction forces exerted through N-cadherin contacts. Biol Cell (2006) 1.78
In vivo and scanning electron microscopy imaging of up-converting nanophosphors in Caenorhabditis elegans. Nano Lett (2006) 1.73
An autoregulatory circuit for long-range self-organization in Dictyostelium cell populations. Nature (2005) 1.67
Site-specific chromosomal integration of large synthetic constructs. Nucleic Acids Res (2010) 1.66
DNA confinement in nanochannels: physics and biological applications. Rep Prog Phys (2012) 1.65
Single-molecule studies of repressor-DNA interactions show long-range interactions. Proc Natl Acad Sci U S A (2005) 1.60
An analogy between the evolution of drug resistance in bacterial communities and malignant tissues. Nat Rev Cancer (2011) 1.58
Enhanced Caenorhabditis elegans locomotion in a structured microfluidic environment. PLoS One (2008) 1.49
Parallel microchannel-based measurements of individual erythrocyte areas and volumes. Biophys J (2003) 1.46
Physical model of the dynamic instability in an expanding cell culture. Biophys J (2010) 1.45
Rapid genome mapping in nanochannel arrays for highly complete and accurate de novo sequence assembly of the complex Aegilops tauschii genome. PLoS One (2013) 1.44
Gene location and DNA density determine transcription factor distributions in Escherichia coli. Mol Syst Biol (2012) 1.43
Micro- and nanofluidics for DNA analysis. Anal Bioanal Chem (2004) 1.43
Computation of mutual fitness by competing bacteria. Proc Natl Acad Sci U S A (2008) 1.39
A physical sciences network characterization of non-tumorigenic and metastatic cells. Sci Rep (2013) 1.33
Population fitness and the regulation of Escherichia coli genes by bacterial viruses. PLoS Biol (2005) 1.32
Deterministic separation of cancer cells from blood at 10 mL/min. AIP Adv (2012) 1.30
Excited-state lifetimes of far-infrared collective modes in proteins. Phys Rev Lett (2001) 1.30
Gallium phosphide nanowires as a substrate for cultured neurons. Nano Lett (2007) 1.28
'Dicty dynamics': Dictyostelium motility as persistent random motion. Phys Biol (2011) 1.26
Collective cell motion in an epithelial sheet can be quantitatively described by a stochastic interacting particle model. PLoS Comput Biol (2013) 1.23
High-throughput analysis of spatio-temporal dynamics in Dictyostelium. Genome Biol (2007) 1.19
DNA methylation profiling in nanochannels. Biomicrofluidics (2011) 1.14
Automated velocity mapping of migrating cell populations (AVeMap). Nat Methods (2012) 1.13
Quantitative transcription factor binding kinetics at the single-molecule level. Biophys J (2009) 1.13
Constrained synaptic connectivity in functional mammalian neuronal networks grown on patterned surfaces. J Neurosci Methods (2002) 1.08
Crossing microfluidic streamlines to lyse, label and wash cells. Lab Chip (2008) 1.04
Sub-10 nm self-enclosed self-limited nanofluidic channel arrays. Nano Lett (2008) 1.03
Deterministic microfluidic ratchet. Phys Rev Lett (2009) 1.02
Cell motility and drug gradients in the emergence of resistance to chemotherapy. Proc Natl Acad Sci U S A (2013) 0.99
Minimization of thermodynamic costs in cancer cell invasion. Proc Natl Acad Sci U S A (2013) 0.98
Fluctuation modes of nanoconfined DNA. J Appl Phys (2012) 0.97
Collective escape of chemotactic swimmers through microscopic ratchets. Phys Rev Lett (2010) 0.97
Hydrodynamic metamaterials: microfabricated arrays to steer, refract, and focus streams of biomaterials. Proc Natl Acad Sci U S A (2008) 0.96
Denaturation mapping of Saccharomyces cerevisiae. Lab Chip (2012) 0.96
Role of majority and minority carrier barriers silicon/organic hybrid heterojunction solar cells. Adv Mater (2011) 0.95
Single sub-20 nm wide, centimeter-long nanofluidic channel fabricated by novel nanoimprint mold fabrication and direct imprinting. Nano Lett (2007) 0.95
Probing the invasiveness of prostate cancer cells in a 3D microfabricated landscape. Proc Natl Acad Sci U S A (2011) 0.95
Mathematical description of bacterial traveling pulses. PLoS Comput Biol (2010) 0.95
Microfluidic device for label-free measurement of platelet activation. Lab Chip (2008) 0.94
A nanofluidic railroad switch for DNA. Nano Lett (2006) 0.94
Determining blood cell size using microfluidic hydrodynamics. J Immunol Methods (2007) 0.93
Tilted brownian ratchet for DNA analysis. Anal Chem (2003) 0.92