Published in Phys Rev Lett on July 27, 2006
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A wall of funnels concentrates swimming bacteria. J Bacteriol (2007) 1.92
Growth-rate-dependent partitioning of RNA polymerases in bacteria. Proc Natl Acad Sci U S A (2008) 1.87
Sliding and jumping of single EcoRV restriction enzymes on non-cognate DNA. Nucleic Acids Res (2008) 1.86
Tumor suppressor p53 slides on DNA with low friction and high stability. Biophys J (2008) 1.70
How proteins search for their specific sites on DNA: the role of DNA conformation. Biophys J (2006) 1.68
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Single-molecule analysis of 1D diffusion and transcription elongation of T7 RNA polymerase along individual stretched DNA molecules. Nucleic Acids Res (2007) 1.54
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Diffusion of the restriction nuclease EcoRI along DNA. J Mol Biol (2009) 0.91
Tracking of single quantum dot labeled EcoRV sliding along DNA manipulated by double optical tweezers. Biophys J (2009) 0.91
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Diffusion, capture and recycling of SCAR/WAVE and Arp2/3 complexes observed in cells by single-molecule imaging. J Cell Sci (2012) 0.90
The binding process of a nonspecific enzyme with DNA. Biophys J (2011) 0.90
DNA-recognition process described by MD simulations of the lactose repressor protein on a specific and a non-specific DNA sequence. Nucleic Acids Res (2013) 0.88
Single-molecule views of MutS on mismatched DNA. DNA Repair (Amst) (2014) 0.88
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Sliding of proteins non-specifically bound to DNA: Brownian dynamics studies with coarse-grained protein and DNA models. PLoS Comput Biol (2014) 0.86
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Nuclear magnetic resonance analysis of protein-DNA interactions. J R Soc Interface (2011) 0.86
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Twist-open mechanism of DNA damage recognition by the Rad4/XPC nucleotide excision repair complex. Proc Natl Acad Sci U S A (2016) 0.82
Nonspecific protein-DNA binding is widespread in the yeast genome. Biophys J (2012) 0.82
Nanopore sensing of individual transcription factors bound to DNA. Sci Rep (2015) 0.81
Testing the diffusing boundary model for the helix-coil transition in peptides. Proc Natl Acad Sci U S A (2013) 0.81
The diffusion constant of a labeled protein sliding along DNA. Eur Phys J E Soft Matter (2011) 0.81
Single-image separation measurements of two unresolved fluorophores. Opt Express (2010) 0.81
Nonconsensus Protein Binding to Repetitive DNA Sequence Elements Significantly Affects Eukaryotic Genomes. PLoS Comput Biol (2015) 0.80
Accelerated search kinetics mediated by redox reactions of DNA repair enzymes. Biophys J (2009) 0.80
Do DNA microarrays tell the story of gene expression? Gene Regul Syst Bio (2010) 0.80
Positive and negative design for nonconsensus protein-DNA binding affinity in the vicinity of functional binding sites. Biophys J (2013) 0.80
Differential interaction kinetics of a bipolar structure-specific endonuclease with DNA flaps revealed by single-molecule imaging. PLoS One (2014) 0.80
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Probing the rate-limiting step for intramolecular transfer of a transcription factor between specific sites on the same DNA molecule by (15)Nz-exchange NMR spectroscopy. J Am Chem Soc (2014) 0.78
First-passage time analysis of a one-dimensional diffusion-reaction model: application to protein transport along DNA. BMC Bioinformatics (2011) 0.78
How motif environment influences transcription factor search dynamics: Finding a needle in a haystack. Bioessays (2016) 0.77
Vesicular stomatitis virus polymerase's strong affinity to its template suggests exotic transcription models. PLoS Comput Biol (2014) 0.77
An integrated model of transcription factor diffusion shows the importance of intersegmental transfer and quaternary protein structure for target site finding. PLoS One (2014) 0.77
Single-image axial localization precision analysis for individual fluorophores. Opt Express (2012) 0.77
Proteins searching for their target on DNA by one-dimensional diffusion: overcoming the "speed-stability" paradox. J Biol Phys (2013) 0.76
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Single molecule techniques in DNA repair: a primer. DNA Repair (Amst) (2014) 0.76
The Hinge Region Strengthens the Nonspecific Interaction between Lac-Repressor and DNA: A Computer Simulation Study. PLoS One (2016) 0.75
A new approach to the problem of bulk-mediated surface diffusion. J Chem Phys (2015) 0.75
Cohesin acetylation and Wapl-Pds5 oppositely regulate translocation of cohesin along DNA. EMBO J (2016) 0.75
Searching for the Nik operon: how a ligand-responsive transcription factor hunts for its DNA binding site. Biochemistry (2010) 0.75
Tracking Low-Copy Transcription Factors in Living Bacteria: The Case of the lac Repressor. Biophys J (2017) 0.75
One-Dimensional Search Dynamics of Tumor Suppressor p53 Regulated by a Disordered C-Terminal Domain. Biophys J (2017) 0.75
The dynamics of the monomeric restriction endonuclease BcnI during its interaction with DNA. Nucleic Acids Res (2017) 0.75
DNA Internal Motion Likely Accelerates Protein Target Search in a Packed Nucleoid. Biophys J (2017) 0.75
Bulk-mediated surface transport in the presence of bias. J Chem Phys (2017) 0.75
Real-time kinetics of gene activity in individual bacteria. Cell (2005) 11.08
Continuous particle separation through deterministic lateral displacement. Science (2004) 5.60
Force mapping in epithelial cell migration. Proc Natl Acad Sci U S A (2005) 5.08
From the Cover: The dynamics of genomic-length DNA molecules in 100-nm channels. Proc Natl Acad Sci U S A (2004) 3.65
Statics and dynamics of single DNA molecules confined in nanochannels. Phys Rev Lett (2005) 3.63
Deterministic hydrodynamics: taking blood apart. Proc Natl Acad Sci U S A (2006) 3.38
Physical nature of bacterial cytoplasm. Phys Rev Lett (2006) 2.91
RNA dynamics in live Escherichia coli cells. Proc Natl Acad Sci U S A (2004) 2.57
Using deep sequencing to characterize the biophysical mechanism of a transcriptional regulatory sequence. Proc Natl Acad Sci U S A (2010) 2.32
Restriction mapping in nanofluidic devices. Proc Natl Acad Sci U S A (2005) 2.28
Acceleration of emergence of bacterial antibiotic resistance in connected microenvironments. Science (2011) 2.26
Bacterial metapopulations in nanofabricated landscapes. Proc Natl Acad Sci U S A (2006) 2.26
Persistent cell motion in the absence of external signals: a search strategy for eukaryotic cells. PLoS One (2008) 2.20
Critical particle size for fractionation by deterministic lateral displacement. Lab Chip (2006) 2.07
Electrodeless dielectrophoresis of single- and double-stranded DNA. Biophys J (2002) 1.97
Motion to form a quorum. Science (2003) 1.95
A DNA prism for high-speed continuous fractionation of large DNA molecules. Nat Biotechnol (2002) 1.78
In vivo and scanning electron microscopy imaging of up-converting nanophosphors in Caenorhabditis elegans. Nano Lett (2006) 1.73
An autoregulatory circuit for long-range self-organization in Dictyostelium cell populations. Nature (2005) 1.67
Site-specific chromosomal integration of large synthetic constructs. Nucleic Acids Res (2010) 1.66
DNA confinement in nanochannels: physics and biological applications. Rep Prog Phys (2012) 1.65
Single-molecule studies of repressor-DNA interactions show long-range interactions. Proc Natl Acad Sci U S A (2005) 1.60
An analogy between the evolution of drug resistance in bacterial communities and malignant tissues. Nat Rev Cancer (2011) 1.58
Enhanced Caenorhabditis elegans locomotion in a structured microfluidic environment. PLoS One (2008) 1.49
Parallel microchannel-based measurements of individual erythrocyte areas and volumes. Biophys J (2003) 1.46
Gene location and DNA density determine transcription factor distributions in Escherichia coli. Mol Syst Biol (2012) 1.43
Micro- and nanofluidics for DNA analysis. Anal Bioanal Chem (2004) 1.43
Computation of mutual fitness by competing bacteria. Proc Natl Acad Sci U S A (2008) 1.39
A physical sciences network characterization of non-tumorigenic and metastatic cells. Sci Rep (2013) 1.33
Population fitness and the regulation of Escherichia coli genes by bacterial viruses. PLoS Biol (2005) 1.32
Deterministic separation of cancer cells from blood at 10 mL/min. AIP Adv (2012) 1.30
Excited-state lifetimes of far-infrared collective modes in proteins. Phys Rev Lett (2001) 1.30
'Dicty dynamics': Dictyostelium motility as persistent random motion. Phys Biol (2011) 1.26
High-throughput analysis of spatio-temporal dynamics in Dictyostelium. Genome Biol (2007) 1.19
Quantitative transcription factor binding kinetics at the single-molecule level. Biophys J (2009) 1.13
Crossing microfluidic streamlines to lyse, label and wash cells. Lab Chip (2008) 1.04
Sub-10 nm self-enclosed self-limited nanofluidic channel arrays. Nano Lett (2008) 1.03
Deterministic microfluidic ratchet. Phys Rev Lett (2009) 1.02
Cell motility and drug gradients in the emergence of resistance to chemotherapy. Proc Natl Acad Sci U S A (2013) 0.99
Minimization of thermodynamic costs in cancer cell invasion. Proc Natl Acad Sci U S A (2013) 0.98
Collective escape of chemotactic swimmers through microscopic ratchets. Phys Rev Lett (2010) 0.97
Hydrodynamic metamaterials: microfabricated arrays to steer, refract, and focus streams of biomaterials. Proc Natl Acad Sci U S A (2008) 0.96
Single sub-20 nm wide, centimeter-long nanofluidic channel fabricated by novel nanoimprint mold fabrication and direct imprinting. Nano Lett (2007) 0.95
Probing the invasiveness of prostate cancer cells in a 3D microfabricated landscape. Proc Natl Acad Sci U S A (2011) 0.95
Microfluidic device for label-free measurement of platelet activation. Lab Chip (2008) 0.94
A nanofluidic railroad switch for DNA. Nano Lett (2006) 0.94
Determining blood cell size using microfluidic hydrodynamics. J Immunol Methods (2007) 0.93
Tilted brownian ratchet for DNA analysis. Anal Chem (2003) 0.92
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A microfluidic device for continuous cancer cell culture and passage with hydrodynamic forces. Lab Chip (2010) 0.92
Eukaryotic transcription: what does it mean for a gene to be 'on'? Curr Biol (2006) 0.92
Bacterial chromosome extraction and isolation. Lab Chip (2002) 0.92
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An excitable cortex and memory model successfully predicts new pseudopod dynamics. PLoS One (2012) 0.90
Anomalous spatial redistribution of competing bacteria under starvation conditions. J Bacteriol (2011) 0.89
The histidine kinase homologue DhkK/Sombrero controls morphogenesis in Dictyostelium. Dev Biol (2006) 0.86
A series of Dictyostelium expression vectors for recombination cloning. Plasmid (2006) 0.85
Continuous separation of biomolecules by the laterally asymmetric diffusion array with out-of-plane sample injection. Electrophoresis (2002) 0.85
Applications of Microfluidics in Stem Cell Biology. Bionanoscience (2012) 0.84
Complementary metal oxide semiconductor compatible fabrication and characterization of parylene-C covered nanofluidic channels with integrated nanoelectrodes. Biomicrofluidics (2009) 0.81
Inhibition of clot formation in deterministic lateral displacement arrays for processing large volumes of blood for rare cell capture. Lab Chip (2015) 0.81
Upconverting nanophosphors for bioimaging. Nanotechnology (2009) 0.81
A place for everything: chromosomal integration of large constructs. Bioeng Bugs (2010) 0.81
DNA-binding-protein inhomogeneity in E. coli modeled as biphasic facilitated diffusion. Phys Rev E Stat Nonlin Soft Matter Phys (2013) 0.81
Scaling of mutational effects in models for pleiotropy. Genetics (2003) 0.80
Chapter 8: Spatiotemporal dynamics in bacterial cells: real-time studies with single-event resolution. Methods Cell Biol (2008) 0.80
Single molecule correlation spectroscopy in continuous flow mixers with zero-mode waveguides. Opt Express (2008) 0.80
Microfluidic chemical processing with on-chip washing by deterministic lateral displacement arrays with separator walls. Biomicrofluidics (2015) 0.79
The Goldilocks principle and antibiotic resistance in bacteria. Mol Pharm (2011) 0.78
Particle size dependence of the dynamic photophysical properties of NaYF4:Yb, Er nanocrystals. Opt Express (2010) 0.78
Protein synthesis molecule by molecule. Genome Biol (2006) 0.78
Isoprenylcysteine carboxy methylation is essential for development in Dictyostelium discoideum. Mol Biol Cell (2007) 0.77
Regulation of G protein-coupled cAMP receptor activation by a hydrophobic residue in transmembrane helix 3. Mol Microbiol (2007) 0.77
SENSING DNA WITH ALTERNATING CURRENTS USING A NANOGAP SENSOR EMBEDDED IN A NANOCHANNEL DEVICE. Nano Life (2013) 0.75
Long-range interactions between transcription factors. Nanotechnology (2005) 0.75
Alwyn C. Scott, a subversive character in Biological Physics. J Biol Phys (2009) 0.75
Wetting micro- and nanofluidic devices using supercritical water. Anal Chem (2006) 0.75
On-chip cell labelling and washing by capture and release using microfluidic trap arrays. Biomicrofluidics (2017) 0.75