An autoregulatory circuit for long-range self-organization in Dictyostelium cell populations.

PubWeight™: 1.67‹?› | Rank: Top 3%

🔗 View Article (PMID 15662425)

Published in Nature on January 20, 2005

Authors

Satoshi Sawai1, Peter A Thomason, Edward C Cox

Author Affiliations

1: Department of Molecular Biology, Princeton University, Princeton, New Jersey 08544, USA. ssawai@molbio.princeton.edu

Articles citing this

Macrophages define the invasive microenvironment in breast cancer. J Leukoc Biol (2008) 3.02

The onset of collective behavior in social amoebae. Science (2010) 2.16

Big roles for small GTPases in the control of directed cell movement. Biochem J (2007) 1.89

Secreting and sensing the same molecule allows cells to achieve versatile social behaviors. Science (2014) 1.80

Cytosystems dynamics in self-organization of tissue architecture. Nature (2013) 1.74

Computational morphodynamics of plants: integrating development over space and time. Nat Rev Mol Cell Biol (2011) 1.67

Evolution of robustness to noise and mutation in gene expression dynamics. PLoS One (2007) 1.51

Imaging of cell migration. EMBO J (2006) 1.26

A self-organization framework for symmetry breaking in the mammalian embryo. Nat Rev Mol Cell Biol (2013) 1.20

High-throughput analysis of spatio-temporal dynamics in Dictyostelium. Genome Biol (2007) 1.19

Phase geometries of two-dimensional excitable waves govern self-organized morphodynamics of amoeboid cells. Proc Natl Acad Sci U S A (2013) 1.05

Phosphoinositide 3-kinase activity controls the chemoattractant-mediated activation and adaptation of adenylyl cyclase. Mol Biol Cell (2005) 1.04

Analysis of phenotypic evolution in Dictyostelia highlights developmental plasticity as a likely consequence of colonial multicellularity. Proc Biol Sci (2013) 1.03

Oscillatory signaling and network responses during the development of Dictyostelium discoideum. Ageing Res Rev (2008) 1.01

Cellular memory in eukaryotic chemotaxis. Proc Natl Acad Sci U S A (2014) 1.01

Approaching the molecular origins of collective dynamics in oscillating cell populations. Curr Opin Genet Dev (2010) 1.00

Nonadaptive regulation of ERK2 in Dictyostelium: implications for mechanisms of cAMP relay. Mol Biol Cell (2006) 0.98

The group migration of Dictyostelium cells is regulated by extracellular chemoattractant degradation. Mol Biol Cell (2009) 0.98

Rectified directional sensing in long-range cell migration. Nat Commun (2014) 0.97

Real-time measurements of cAMP production in live Dictyostelium cells. J Cell Sci (2009) 0.94

A precise chloroplast genome of Nelumbo nucifera (Nelumbonaceae) evaluated with Sanger, Illumina MiSeq, and PacBio RS II sequencing platforms: insight into the plastid evolution of basal eudicots. BMC Plant Biol (2014) 0.91

Regulation of transcriptional bursting by a naturally oscillating signal. Curr Biol (2014) 0.90

The Amoebozoa. Methods Mol Biol (2013) 0.85

From intracellular signaling to population oscillations: bridging size- and time-scales in collective behavior. Mol Syst Biol (2015) 0.85

Cardiac beat-to-beat alternations driven by unusual spiral waves. Proc Natl Acad Sci U S A (2007) 0.83

Direct biochemical measurements of signal relay during Dictyostelium development. J Biol Chem (2011) 0.83

Predicting the distribution of spiral waves from cell properties in a developmental-path model of Dictyostelium pattern formation. PLoS Comput Biol (2009) 0.82

A cAMP signaling model explains the benefit of maintaining two forms of phosphodiesterase in Dictyostelium. Biophys J (2009) 0.82

Perspective: network-guided pattern formation of neural dynamics. Philos Trans R Soc Lond B Biol Sci (2014) 0.82

Chemotaxis of Dictyostelium discoideum: collective oscillation of cellular contacts. PLoS One (2013) 0.81

My 2,000 best films: parallel phenotyping of Dictyostelium development. Genome Biol (2007) 0.80

Robustness of self-organizing chemoattractant field arising from precise pulse induction of its breakdown enzyme: a single-cell level analysis of PDE expression in Dictyostelium. Biophys J (2013) 0.80

Phosphorylation of chemoattractant receptors regulates chemotaxis, actin reorganization and signal relay. J Cell Sci (2013) 0.80

Prospective tests on biological models of acupuncture. Evid Based Complement Alternat Med (2007) 0.79

Reconstruction of cellular variability from spatiotemporal patterns of Dictyostelium discoideum. Nonlinear Biomed Phys (2007) 0.79

The green tea catechin epigallocatechin gallate (EGCG) blocks cell motility, chemotaxis and development in Dictyostelium discoideum. PLoS One (2013) 0.79

Excitable waves and direction-sensing in Dictyostelium discoideum: steps towards a chemotaxis model. Phys Biol (2016) 0.79

Unpinning of rotating spiral waves in cardiac tissues by circularly polarized electric fields. Sci Rep (2014) 0.78

Arachidonic acid enhances caffeine-induced cell death via caspase-independent cell death. Sci Rep (2012) 0.77

MPL1, a novel phosphatase with leucine-rich repeats, is essential for proper ERK2 phosphorylation and cell motility. Eukaryot Cell (2008) 0.77

Modeling and measuring signal relay in noisy directed migration of cell groups. PLoS Comput Biol (2013) 0.76

Predictability of spatio-temporal patterns in a lattice of coupled FitzHugh-Nagumo oscillators. J R Soc Interface (2013) 0.76

Modeling oscillations and spiral waves in Dictyostelium populations. Phys Rev E Stat Nonlin Soft Matter Phys (2015) 0.76

Regulation of Spatiotemporal Patterns by Biological Variability: General Principles and Applications to Dictyostelium discoideum. PLoS Comput Biol (2015) 0.76

Removal of pinned scroll waves in cardiac tissues by electric fields in a generic model of three-dimensional excitable media. Sci Rep (2016) 0.75

Self-organization of chemoattractant waves in Dictyostelium depends on F-actin and cell-substrate adhesion. J R Soc Interface (2016) 0.75

Collective behavior of Dictyostelium discoideum monitored by impedance analysis. Commun Integr Biol (2013) 0.75

A critical-like collective state leads to long-range cell communication in Dictyostelium discoideum aggregation. PLoS Biol (2017) 0.75

A design principle of group-level decision making in cell populations. PLoS Comput Biol (2013) 0.75

Articles by these authors

Real-time kinetics of gene activity in individual bacteria. Cell (2005) 11.08

Continuous particle separation through deterministic lateral displacement. Science (2004) 5.60

From the Cover: The dynamics of genomic-length DNA molecules in 100-nm channels. Proc Natl Acad Sci U S A (2004) 3.65

Physical nature of bacterial cytoplasm. Phys Rev Lett (2006) 2.91

Single molecule measurements of repressor protein 1D diffusion on DNA. Phys Rev Lett (2006) 2.81

Histidine protein kinases: key signal transducers outside the animal kingdom. Genome Biol (2002) 2.60

RNA dynamics in live Escherichia coli cells. Proc Natl Acad Sci U S A (2004) 2.57

Using deep sequencing to characterize the biophysical mechanism of a transcriptional regulatory sequence. Proc Natl Acad Sci U S A (2010) 2.32

Restriction mapping in nanofluidic devices. Proc Natl Acad Sci U S A (2005) 2.28

Persistent cell motion in the absence of external signals: a search strategy for eukaryotic cells. PLoS One (2008) 2.20

Electrodeless dielectrophoresis of single- and double-stranded DNA. Biophys J (2002) 1.97

A DNA prism for high-speed continuous fractionation of large DNA molecules. Nat Biotechnol (2002) 1.78

Site-specific chromosomal integration of large synthetic constructs. Nucleic Acids Res (2010) 1.66

Single-molecule studies of repressor-DNA interactions show long-range interactions. Proc Natl Acad Sci U S A (2005) 1.60

Gene location and DNA density determine transcription factor distributions in Escherichia coli. Mol Syst Biol (2012) 1.43

Micro- and nanofluidics for DNA analysis. Anal Bioanal Chem (2004) 1.43

Population fitness and the regulation of Escherichia coli genes by bacterial viruses. PLoS Biol (2005) 1.32

'Dicty dynamics': Dictyostelium motility as persistent random motion. Phys Biol (2011) 1.26

High-throughput analysis of spatio-temporal dynamics in Dictyostelium. Genome Biol (2007) 1.19

Quantitative transcription factor binding kinetics at the single-molecule level. Biophys J (2009) 1.13

Cyclical action of the WASH complex: FAM21 and capping protein drive WASH recycling, not initial recruitment. Dev Cell (2013) 0.98

Tilted brownian ratchet for DNA analysis. Anal Chem (2003) 0.92

Role of molecular size in ratchet fractionation. Phys Rev Lett (2002) 0.92

Eukaryotic transcription: what does it mean for a gene to be 'on'? Curr Biol (2006) 0.92

Bacterial chromosome extraction and isolation. Lab Chip (2002) 0.92

An excitable cortex and memory model successfully predicts new pseudopod dynamics. PLoS One (2012) 0.90

The histidine kinase homologue DhkK/Sombrero controls morphogenesis in Dictyostelium. Dev Biol (2006) 0.86

A series of Dictyostelium expression vectors for recombination cloning. Plasmid (2006) 0.85

Bio-informatics analysis of a gene co-expression module in adipose tissue containing the diet-responsive gene Nnat. BMC Syst Biol (2010) 0.82

DNA-binding-protein inhomogeneity in E. coli modeled as biphasic facilitated diffusion. Phys Rev E Stat Nonlin Soft Matter Phys (2013) 0.81

A place for everything: chromosomal integration of large constructs. Bioeng Bugs (2010) 0.81

Phosphorylation of actin-related protein 2 (Arp2) is required for normal development and cAMP chemotaxis in Dictyostelium. J Biol Chem (2012) 0.81

Abi is required for modulation and stability but not localization or activation of the SCAR/WAVE complex. Eukaryot Cell (2013) 0.81

Chapter 8: Spatiotemporal dynamics in bacterial cells: real-time studies with single-event resolution. Methods Cell Biol (2008) 0.80

Scaling of mutational effects in models for pleiotropy. Genetics (2003) 0.80

Measuring chemotaxis using direct visualization microscope chambers. Methods Mol Biol (2013) 0.79

Protein synthesis molecule by molecule. Genome Biol (2006) 0.78

Isoprenylcysteine carboxy methylation is essential for development in Dictyostelium discoideum. Mol Biol Cell (2007) 0.77

Regulation of G protein-coupled cAMP receptor activation by a hydrophobic residue in transmembrane helix 3. Mol Microbiol (2007) 0.77