Published in J Biol Chem on January 31, 2005
Fibroblast growth factor signalling: from development to cancer. Nat Rev Cancer (2010) 8.55
Splicing regulation: from a parts list of regulatory elements to an integrated splicing code. RNA (2008) 6.29
Unusual intron conservation near tissue-regulated exons found by splicing microarrays. PLoS Comput Biol (2006) 4.63
Fox-2 mediates epithelial cell-specific fibroblast growth factor receptor 2 exon choice. Mol Cell Biol (2006) 2.18
A correlation with exon expression approach to identify cis-regulatory elements for tissue-specific alternative splicing. Nucleic Acids Res (2007) 1.94
Novel c-CBL and CBL-b ubiquitin ligase mutations in human acute myeloid leukemia. Blood (2007) 1.83
STAR family RNA-binding protein ASD-2 regulates developmental switching of mutually exclusive alternative splicing in vivo. Genes Dev (2008) 1.41
Alternative inclusion of fibroblast growth factor receptor 2 exon IIIc in Dunning prostate tumors reveals unexpected epithelial mesenchymal plasticity. Proc Natl Acad Sci U S A (2006) 1.36
Tissue-specific splicing regulator Fox-1 induces exon skipping by interfering E complex formation on the downstream intron of human F1gamma gene. Nucleic Acids Res (2007) 1.11
Fas-activated serine/threonine phosphoprotein (FAST) is a regulator of alternative splicing. Proc Natl Acad Sci U S A (2007) 1.00
Characterization of sequences and mechanisms through which ISE/ISS-3 regulates FGFR2 splicing. Nucleic Acids Res (2006) 0.93
Splicing reporter mice revealed the evolutionally conserved switching mechanism of tissue-specific alternative exon selection. PLoS One (2010) 0.91
Imaging the alternative silencing of FGFR2 exon IIIb in vivo. RNA (2006) 0.90
A novel splicing silencer generated by DMD exon 45 deletion junction could explain upstream exon 44 skipping that modifies dystrophinopathy. J Hum Genet (2014) 0.88
Identification of an intronic splicing enhancer essential for the inclusion of FGFR2 exon IIIc. J Biol Chem (2008) 0.88
A novel role of RASSF9 in maintaining epidermal homeostasis. PLoS One (2011) 0.80
A posttranscriptional mechanism that controls Ptbp1 abundance in the Xenopus epidermis. Mol Cell Biol (2014) 0.75
Interleukin 7 receptor alpha chain (IL7R) shows allelic and functional association with multiple sclerosis. Nat Genet (2007) 5.09
Alternative splicing in disease and therapy. Nat Biotechnol (2004) 4.85
Factors affecting reproducibility between genome-scale siRNA-based screens. J Biomol Screen (2010) 4.47
Autoregulation of polypyrimidine tract binding protein by alternative splicing leading to nonsense-mediated decay. Mol Cell (2004) 4.13
Daily or intermittent budesonide in preschool children with recurrent wheezing. N Engl J Med (2011) 4.09
Genomewide association between GLCCI1 and response to glucocorticoid therapy in asthma. N Engl J Med (2011) 3.80
Reversible cross-linking combined with immunoprecipitation to study RNA-protein interactions in vivo. Methods (2002) 3.73
Discovery of insect and human dengue virus host factors. Nature (2009) 3.49
Circulating tumor cells from patients with advanced prostate and breast cancer display both epithelial and mesenchymal markers. Mol Cancer Res (2011) 3.25
Classifying asthma severity in children: mismatch between symptoms, medication use, and lung function. Am J Respir Crit Care Med (2004) 2.46
RNAi-mediated PTB depletion leads to enhanced exon definition. Mol Cell (2002) 2.34
Fox-2 mediates epithelial cell-specific fibroblast growth factor receptor 2 exon choice. Mol Cell Biol (2006) 2.18
Relative validity of food frequency questionnaire nutrient estimates in the Black Women's Health Study. Ann Epidemiol (2003) 2.11
Phenotype correction of hemophilia A mice by spliceosome-mediated RNA trans-splicing. Nat Med (2003) 2.04
Partial correction of endogenous DeltaF508 CFTR in human cystic fibrosis airway epithelia by spliceosome-mediated RNA trans-splicing. Nat Biotechnol (2002) 1.96
Do oral corticosteroids reduce the severity of acute lower respiratory tract illnesses in preschool children with recurrent wheezing? J Allergy Clin Immunol (2013) 1.82
Asthma outcomes: exacerbations. J Allergy Clin Immunol (2012) 1.76
A stem structure in fibroblast growth factor receptor 2 transcripts mediates cell-type-specific splicing by approximating intronic control elements. Mol Cell Biol (2003) 1.63
hnRNP H and hnRNP F complex with Fox2 to silence fibroblast growth factor receptor 2 exon IIIc. Mol Cell Biol (2008) 1.60
Quantitative mass spectrometry of DENV-2 RNA-interacting proteins reveals that the DEAD-box RNA helicase DDX6 binds the DB1 and DB2 3' UTR structures. RNA Biol (2011) 1.54
MAZ elements alter transcription elongation and silencing of the fibroblast growth factor receptor 2 exon IIIb. J Biol Chem (2004) 1.52
The relationship of pulmonary artery pressure and survival in congenital diaphragmatic hernia. J Pediatr Surg (2004) 1.42
Role for Fox-1/Fox-2 in mediating the neuronal pathway of calcitonin/calcitonin gene-related peptide alternative RNA processing. Mol Cell Biol (2006) 1.41
Alternative inclusion of fibroblast growth factor receptor 2 exon IIIc in Dunning prostate tumors reveals unexpected epithelial mesenchymal plasticity. Proc Natl Acad Sci U S A (2006) 1.36
Quantification of alternatively spliced FGFR2 RNAs using the RNA invasive cleavage assay. RNA (2003) 1.23
Patient characteristics associated with improved outcomes with use of an inhaled corticosteroid in preschool children at risk for asthma. J Allergy Clin Immunol (2009) 1.21
Low-dose naltrexone therapy improves active Crohn's disease. Am J Gastroenterol (2007) 1.19
A dynamic model for genome-wide association studies. Hum Genet (2011) 1.15
Zika Virus: Diagnosis, Therapeutics, and Vaccine. ACS Infect Dis (2016) 1.15
Method of mutation analysis may contribute to discrepancies in reports of (V599E)BRAF mutation frequencies in melanocytic neoplasms. J Invest Dermatol (2004) 1.13
5' exon replacement and repair by spliceosome-mediated RNA trans-splicing. RNA (2003) 1.13
Reprogramming of tau alternative splicing by spliceosome-mediated RNA trans-splicing: implications for tauopathies. Proc Natl Acad Sci U S A (2005) 1.10
Of urchins and men: evolution of an alternative splicing unit in fibroblast growth factor receptor genes. RNA (2003) 1.03
Alternative splicing in multiple sclerosis and other autoimmune diseases. RNA Biol (2010) 1.02
Human transcription elongation factor CA150 localizes to splicing factor-rich nuclear speckles and assembles transcription and splicing components into complexes through its amino and carboxyl regions. Mol Cell Biol (2006) 1.02
G protein-coupled receptor kinase 2 promotes flaviviridae entry and replication. PLoS Negl Trop Dis (2012) 1.01
The polypyrimidine tract-binding protein is required for efficient dengue virus propagation and associates with the viral replication machinery. J Biol Chem (2009) 1.01
Fas-activated serine/threonine phosphoprotein (FAST) is a regulator of alternative splicing. Proc Natl Acad Sci U S A (2007) 1.00
In vitro coupled transcription splicing. Methods (2005) 0.99
A double blind, placebo-controlled, randomized crossover study of the acute metabolic effects of olanzapine in healthy volunteers. PLoS One (2011) 0.99
Dunning rat prostate adenocarcinomas and alternative splicing reporters: powerful tools to study epithelial plasticity in prostate tumors in vivo. Clin Exp Metastasis (2008) 0.99
Correlation between serum levels of insulin-like growth factor 1, dehydroepiandrosterone sulfate, and dihydrotestosterone and acne lesion counts in adult women. Arch Dermatol (2005) 0.98
A protocol for imaging alternative splicing regulation in vivo using fluorescence reporters in transgenic mice. Nat Protoc (2007) 0.96
Region-specific distribution of human immunodeficiency virus type 1 long terminal repeats containing specific configurations of CCAAT/enhancer-binding protein site II in brains derived from demented and nondemented patients. J Neurovirol (2004) 0.94
The role of epithelial plasticity in prostate cancer dissemination and treatment resistance. Cancer Metastasis Rev (2014) 0.94
The Carboxyl-terminal Domain of RNA Polymerase II Is Not Sufficient to Enhance the Efficiency of Pre-mRNA Capping or Splicing in the Context of a Different Polymerase. J Biol Chem (2009) 0.92
Imaging alternative splicing in living cells. Methods Mol Biol (2004) 0.92
Development of a method to isolate circulating tumor cells using mesenchymal-based capture. Methods (2013) 0.92
Flaviviral RNAs: weapons and targets in the war between virus and host. Biochem J (2014) 0.92
Effects of alpha-difluoromethylornithine on local recurrence and pulmonary metastasis from MDA-MB-435 breast cancer xenografts in nude mice. Clin Exp Metastasis (2003) 0.91
Correction of tau mis-splicing caused by FTDP-17 MAPT mutations by spliceosome-mediated RNA trans-splicing. Hum Mol Genet (2009) 0.91
The polypyrimidine tract binding protein is required for efficient picornavirus gene expression and propagation. J Virol (2005) 0.91
Identification of the cellular targets of the transcription factor TCERG1 reveals a prevalent role in mRNA processing. J Biol Chem (2008) 0.91
Integration of mouse and human genome-wide association data identifies KCNIP4 as an asthma gene. PLoS One (2013) 0.91
Imaging the alternative silencing of FGFR2 exon IIIb in vivo. RNA (2006) 0.90
Correlation between presumed sinusitis-induced pain and paranasal sinus computed tomographic findings. Ann Allergy Asthma Immunol (2002) 0.89
Tat-SF1 is not required for Tat transactivation but does regulate the relative levels of unspliced and spliced HIV-1 RNAs. PLoS One (2009) 0.88
Specific sequence configurations of HIV-1 LTR G/C box array result in altered recruitment of Sp isoforms and correlate with disease progression. J Neuroimmunol (2004) 0.88
Identification of an intronic splicing enhancer essential for the inclusion of FGFR2 exon IIIc. J Biol Chem (2008) 0.88
Does agreement on institutional values and leadership issues between deans and surgery chairs predict their institutions' performance? Acad Med (2007) 0.87
SplicerAV: a tool for mining microarray expression data for changes in RNA processing. BMC Bioinformatics (2010) 0.87
The kinase inhibitor SFV785 dislocates dengue virus envelope protein from the replication complex and blocks virus assembly. PLoS One (2011) 0.86
Initiation of human immunodeficiency virus type 1 (HIV-1) transcription is inhibited by noncytolytic CD8 suppression. Open Virol J (2007) 0.85
Influence of polyamines on in vitro and in vivo features of aggressive and metastatic behavior by human breast cancer cells. Clin Exp Metastasis (2002) 0.84
Transcription elongation regulator 1 (TCERG1) regulates competent RNA polymerase II-mediated elongation of HIV-1 transcription and facilitates efficient viral replication. Retrovirology (2013) 0.83
Trans-splicing into highly abundant albumin transcripts for production of therapeutic proteins in vivo. Mol Ther (2008) 0.83
Identification of Tat-SF1 cellular targets by exon array analysis reveals dual roles in transcription and splicing. RNA (2011) 0.82
Fluorescence-based alternative splicing reporters for the study of epithelial plasticity in vivo. RNA (2012) 0.82
The impact of fish oil on the chemopreventive efficacy of tamoxifen against development of N-methyl-N-nitrosourea-induced rat mammary carcinogenesis. Cancer Prev Res (Phila) (2010) 0.82
A conceptual framework for pharmacodynamic genome-wide association studies in pharmacogenomics. Drug Discov Today (2011) 0.81
Cellular mechanisms mediating the anti-invasive properties of the ornithine decarboxylase inhibitor alpha-difluoromethylornithine (DFMO) in human breast cancer cells. Clin Exp Metastasis (2004) 0.81
A functional genetic approach suggests a novel interaction between the human immunodeficiency virus type 1 (HIV-1) Tat protein and HIV-1 TAR RNA in vivo. J Gen Virol (2003) 0.81
Cleavage and polyadenylation specificity factor 1 (CPSF1) regulates alternative splicing of interleukin 7 receptor (IL7R) exon 6. RNA (2012) 0.81
TIA nuclear proteins regulate the alternate splicing of lysyl hydroxylase 2. J Invest Dermatol (2008) 0.81
Next-generation whole genome sequencing of dengue virus. Methods Mol Biol (2014) 0.80
A retrospective chart review to identify perinatal factors associated with food allergies. Nutr J (2012) 0.80
Using circulating tumor cells to inform on prostate cancer biology and clinical utility. Crit Rev Clin Lab Sci (2015) 0.80
Identification of dengue RNA binding proteins using RNA chromatography and quantitative mass spectrometry. Methods Mol Biol (2014) 0.80
Epstein-Barr virus induces global changes in cellular mRNA isoform usage that are important for the maintenance of latency. J Virol (2013) 0.79
A statistical model for genetic mapping of viral infection by integrating epidemiological behavior. Stat Appl Genet Mol Biol (2009) 0.79
Chikungunya as a cause of acute febrile illness in southern Sri Lanka. PLoS One (2013) 0.79
Effects of polyamine synthesis inhibitors on primary tumor features and metastatic capacity of human breast cancer cells. Clin Exp Metastasis (2005) 0.78
Respiratory systems abnormalities and clinical milestones for patients with amyotrophic lateral sclerosis with emphasis upon survival. Amyotroph Lateral Scler (2007) 0.78
Successful clearance of human parainfluenza virus type 2 viraemia with intravenous ribavirin and immunoglobulin in a patient with acute myocarditis. J Clin Virol (2012) 0.77
Most nocturnal asthma symptoms occur outside of exacerbations and associate with morbidity. J Allergy Clin Immunol (2011) 0.77
Shedding UV light on alternative splicing. Cell (2009) 0.77
Functional genomics approach for the identification of human host factors supporting dengue viral propagation. Methods Mol Biol (2014) 0.77
Mending the message. Nat Biotechnol (2003) 0.77
ITGB5 and AGFG1 variants are associated with severity of airway responsiveness. BMC Med Genet (2013) 0.76
Death receptor apoptosis signaling mediated by FADD in CD30-positive lymphoproliferative disorders involving the skin. Am J Surg Pathol (2005) 0.76
Quantification of microRNAs, splicing isoforms, and homologous mRNAs with the invader assay. Methods Mol Biol (2008) 0.76
Biological activity of the S-adenosylmethionine decarboxylase inhibitor SAM486A in human breast cancer cells in vitro and in vivo. Int J Oncol (2004) 0.76
Treatment of Wilms tumor-related hypertension with losartan and captopril. Pediatr Nephrol (2004) 0.75
Correction: G3BP1, G3BP2 and CAPRIN1 Are Required for Translation of Interferon Stimulated mRNAs and Are Targeted by a Dengue Virus Non-coding RNA. PLoS Pathog (2017) 0.75
Assessing incomplete deprotection of microarray oligonucleotides in situ. Nucleic Acids Res (2006) 0.75